Search of human proteins with 170784820

Search of human proteins with 170784820

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|170784820 hypothetical protein LOC83648 [Homo sapiens]
         (214 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|170784820 hypothetical protein LOC83648 [Homo sapiens]             430   e-121
gi|110238585 hypothetical protein LOC84734 [Homo sapiens]             119   3e-27
gi|57528105 hypothetical protein LOC400831 [Homo sapiens]              38   0.007
gi|103472003 forkhead box O4 [Homo sapiens]                            37   0.016
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [...    35   0.062
gi|4505507 oligophrenin 1 [Homo sapiens]                               33   0.14 
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa...    33   0.18 
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa...    33   0.18 
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa...    33   0.18 
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap...    33   0.18 
gi|94557295 mitogen-activated protein kinase 8 interacting prote...    33   0.18 
gi|94557297 mitogen-activated protein kinase 8 interacting prote...    33   0.18 
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    32   0.40 
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    32   0.40 
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ...    32   0.40 
gi|23503317 coiled-coil domain containing 96 [Homo sapiens]            32   0.40 
gi|222537747 hypothetical protein LOC342979 [Homo sapiens]             32   0.53 
gi|157739942 gemin 5 [Homo sapiens]                                    32   0.53 
gi|42822876 hypothetical protein LOC286343 [Homo sapiens]              32   0.53 
gi|4758650 kinesin family member 5C [Homo sapiens]                     31   0.69 
gi|110611228 utrophin [Homo sapiens]                                   31   0.69 
gi|58331144 proline rich region 18 [Homo sapiens]                      31   0.69 
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H...    31   0.90 
gi|194473673 hypothetical protein LOC100170765 [Homo sapiens]          31   0.90 
gi|115334682 SNAP25-interacting protein [Homo sapiens]                 31   0.90 
gi|66730423 hypothetical protein LOC389384 [Homo sapiens]              31   0.90 
gi|228008351 coiled-coil domain containing 48 [Homo sapiens]           30   1.2  
gi|126090663 zinc finger homeodomain 4 [Homo sapiens]                  30   1.2  
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh...    30   1.2  
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo...    30   1.2  

>gi|170784820 hypothetical protein LOC83648 [Homo sapiens]
          Length = 214

 Score =  430 bits (1105), Expect = e-121
 Identities = 214/214 (100%), Positives = 214/214 (100%)

Query: 1   MSVPQIHVEEVGAEEGAGAAAPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEHTWPF 60
           MSVPQIHVEEVGAEEGAGAAAPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEHTWPF
Sbjct: 1   MSVPQIHVEEVGAEEGAGAAAPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEHTWPF 60

Query: 61  PRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAI 120
           PRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAI
Sbjct: 61  PRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAI 120

Query: 121 AWLRKELTEMRLQDQQLARQLMRLRGDINKLKIEHTCRLHRRMLNDATYELEERDELADL 180
           AWLRKELTEMRLQDQQLARQLMRLRGDINKLKIEHTCRLHRRMLNDATYELEERDELADL
Sbjct: 121 AWLRKELTEMRLQDQQLARQLMRLRGDINKLKIEHTCRLHRRMLNDATYELEERDELADL 180

Query: 181 FCDSPLASSFSLSTPLKLIGVTKMNINSRRFSLC 214
           FCDSPLASSFSLSTPLKLIGVTKMNINSRRFSLC
Sbjct: 181 FCDSPLASSFSLSTPLKLIGVTKMNINSRRFSLC 214


>gi|110238585 hypothetical protein LOC84734 [Homo sapiens]
          Length = 163

 Score =  119 bits (297), Expect = 3e-27
 Identities = 73/214 (34%), Positives = 110/214 (51%), Gaps = 51/214 (23%)

Query: 1   MSVPQIHVEEVGAEEGAGAAAPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEHTWPF 60
           MS+  +  + VG E+         + L S+KALT KL+L+TRRPSYLEW A+++   W  
Sbjct: 1   MSLGLLKFQAVGEEDEEDEEG---ESLDSVKALTAKLQLQTRRPSYLEWTAQVQSQAW-- 55

Query: 61  PRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAI 120
                                              R A     P   G + GF S+D A+
Sbjct: 56  -----------------------------------RRAQAKPGPGGPGDICGFDSMDSAL 80

Query: 121 AWLRKELTEMRLQDQQLARQLMRLRGDINKLKIEHTCRLHRRMLNDATYELEERDELADL 180
            WLR+EL EM+ QD+QLA QL+RLR  +++LK++  C LH+ +L++A  ELE        
Sbjct: 81  EWLRRELREMQAQDRQLAGQLLRLRAQLHRLKMDQACHLHQELLDEAELELELEP----- 135

Query: 181 FCDSPLASSFSLSTPLKLIGVTKMNINSRRFSLC 214
                  +  +L+  L+ +G+T+MNI++RRF+LC
Sbjct: 136 ------GAGLALAPLLRHLGLTRMNISARRFTLC 163


>gi|57528105 hypothetical protein LOC400831 [Homo sapiens]
          Length = 122

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/40 (40%), Positives = 26/40 (65%)

Query: 115 SIDEAIAWLRKELTEMRLQDQQLARQLMRLRGDINKLKIE 154
           S+ + + WLRKEL+EM++QDQ L   L  L   + +L+ +
Sbjct: 33  SLGQTLEWLRKELSEMQIQDQSLLLTLRHLHSVLEELRAD 72


>gi|103472003 forkhead box O4 [Homo sapiens]
          Length = 505

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 47/150 (31%), Positives = 61/150 (40%), Gaps = 29/150 (19%)

Query: 48  EWQARLEEHTWPFPR------PAAEPQASLEEGER----GGQEP-LLPLR---EAGQHPP 93
           E Q+R    TWP PR      P+  P+   + GE+    G  EP LLP R    AG   P
Sbjct: 23  EPQSRPRSCTWPLPRPEIANQPSEPPEVEPDLGEKVHTEGRSEPILLPSRLPEPAGGPQP 82

Query: 94  SARSASQGARP-LSTGKLEGFQSIDEAIAWLRKELTEMRLQDQQLARQLMRL------RG 146
               A  G R   S     G QS  E I+   +   E RL   Q+   ++R       +G
Sbjct: 83  GILGAVTGPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKG 142

Query: 147 DIN-----KLKIEHTCRLHRRML---NDAT 168
           D N     K  I H   LH + +   N+AT
Sbjct: 143 DSNSSAGWKNSIRHNLSLHSKFIKVHNEAT 172


>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
            sapiens]
          Length = 2564

 Score = 34.7 bits (78), Expect = 0.062
 Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 24/143 (16%)

Query: 12   GAEEGAGAAAPPDDHLRS--LKALTEKLRLETRRPSYLEWQARLEEHTWPFPRPAAEPQA 69
            G  E A   A P+D   +    A  E++R    RP   E   R EE      R   E Q 
Sbjct: 2200 GRVEPAALPAAPEDAAETPATPAAAEQVR---PRPERQESADRAEELP---RRRRPERQE 2253

Query: 70   SLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAIAWLRKELTE 129
            S+++ E   +      +E+ +H        + A  L+ G+ E  +         R+E  E
Sbjct: 2254 SVDQSEEAARRRRPERQESAEH--------EAAHSLTLGRYEQMER--------RRERRE 2297

Query: 130  MRLQDQQLARQLMRLRGDINKLK 152
             RL+ Q+ + Q M +RGD+ K K
Sbjct: 2298 RRLERQESSEQEMPIRGDLVKGK 2320


>gi|4505507 oligophrenin 1 [Homo sapiens]
          Length = 802

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 4/104 (3%)

Query: 14  EEGAGAAAPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEHTWPFPRPAAEPQASLEE 73
           E  A    PP    R  K +T   RL   R  +        E       P     +S+E 
Sbjct: 570 ESAAPPVPPPRVTARRHKPITISKRLLRERTVFYTSSLDESEDEIQHQTPNGTITSSIEP 629

Query: 74  GERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSID 117
             +  Q P LP++ +G+  P  +S S   RP+  GKLE    +D
Sbjct: 630 -PKPPQHPKLPIQRSGETDPGRKSPS---RPILDGKLEPCPEVD 669


>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
           sapiens]
          Length = 1276

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 59  PFPRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDE 118
           P  +  +  +  +    +    P+LP   A   P  +R  ++ +RP S  K     +IDE
Sbjct: 664 PGSQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPASYKK-----AIDE 718

Query: 119 AIAWLRKELTEMRLQD 134
            +  L KEL E+R+++
Sbjct: 719 DLTALAKELRELRIEE 734


>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
           sapiens]
          Length = 1305

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 59  PFPRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDE 118
           P  +  +  +  +    +    P+LP   A   P  +R  ++ +RP S  K     +IDE
Sbjct: 693 PGSQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPASYKK-----AIDE 747

Query: 119 AIAWLRKELTEMRLQD 134
            +  L KEL E+R+++
Sbjct: 748 DLTALAKELRELRIEE 763


>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
           sapiens]
          Length = 1331

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 59  PFPRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDE 118
           P  +  +  +  +    +    P+LP   A   P  +R  ++ +RP S  K     +IDE
Sbjct: 719 PGSQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPASYKK-----AIDE 773

Query: 119 AIAWLRKELTEMRLQD 134
            +  L KEL E+R+++
Sbjct: 774 DLTALAKELRELRIEE 789


>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
           sapiens]
          Length = 1360

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 59  PFPRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDE 118
           P  +  +  +  +    +    P+LP   A   P  +R  ++ +RP S  K     +IDE
Sbjct: 748 PGSQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPASYKK-----AIDE 802

Query: 119 AIAWLRKELTEMRLQD 134
            +  L KEL E+R+++
Sbjct: 803 DLTALAKELRELRIEE 818


>gi|94557295 mitogen-activated protein kinase 8 interacting protein 3
            isoform 2 [Homo sapiens]
          Length = 1330

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 53   LEEHTW--PFPRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKL 110
            L EH +  P P P++ PQ   E G         P  E    P  A   S  A  +  G  
Sbjct: 913  LTEHVFTDPAPTPSSGPQPGSENGPEPDSSSTRPEPEPSGDPTGA--GSSAAPTMWLGAQ 970

Query: 111  EGFQSIDEAIAWLRKELTEMRLQDQQLARQLMRLRGDI 148
             G+  +  A+A  +K L  ++L+D  L+  L+ ++G +
Sbjct: 971  NGWLYVHSAVANWKKCLHSIKLKDSVLS--LVHVKGRV 1006


>gi|94557297 mitogen-activated protein kinase 8 interacting protein 3
            isoform 1 [Homo sapiens]
          Length = 1336

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 53   LEEHTW--PFPRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKL 110
            L EH +  P P P++ PQ   E G         P  E    P  A   S  A  +  G  
Sbjct: 919  LTEHVFTDPAPTPSSGPQPGSENGPEPDSSSTRPEPEPSGDPTGA--GSSAAPTMWLGAQ 976

Query: 111  EGFQSIDEAIAWLRKELTEMRLQDQQLARQLMRLRGDI 148
             G+  +  A+A  +K L  ++L+D  L+  L+ ++G +
Sbjct: 977  NGWLYVHSAVANWKKCLHSIKLKDSVLS--LVHVKGRV 1012


>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 59  PFPRPAAEPQASLEEGE---RGGQEPLLPLREAG-QHPPSARSASQGARPLSTGKLEG 112
           P P P A PQ S E+G    + GQEPL     +G    P+A +A+  A   +  KL G
Sbjct: 201 PAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSG 258


>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 59  PFPRPAAEPQASLEEGE---RGGQEPLLPLREAG-QHPPSARSASQGARPLSTGKLEG 112
           P P P A PQ S E+G    + GQEPL     +G    P+A +A+  A   +  KL G
Sbjct: 201 PAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSG 258


>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
           sapiens]
          Length = 316

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 59  PFPRPAAEPQASLEEGE---RGGQEPLLPLREAG-QHPPSARSASQGARPLSTGKLEG 112
           P P P A PQ S E+G    + GQEPL     +G    P+A +A+  A   +  KL G
Sbjct: 212 PAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSG 269


>gi|23503317 coiled-coil domain containing 96 [Homo sapiens]
          Length = 555

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 41/142 (28%), Positives = 56/142 (39%), Gaps = 24/142 (16%)

Query: 2   SVPQIHVEEVGAEEGAGAAAPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEHTWPFP 61
           S P+   EE  A +G  AA   D+   + K LT               +A  EE      
Sbjct: 45  SEPEEEEEEQAASQGGTAA---DEQAEAPKGLTAA-------------EAAGEEGPGEPG 88

Query: 62  RPAAEPQASLEE-GERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQS----- 115
           RPA EPQ   EE  E G +EP  P   AG     A + ++     + GK   FQ+     
Sbjct: 89  RPA-EPQPEPEEPAEVGAEEPAQPEPGAGPEELEAEAGAEELEQAAEGKEVRFQASLPLT 147

Query: 116 -IDEAIAWLRKELTEMRLQDQQ 136
            IDE  A    E    R++ ++
Sbjct: 148 RIDEEEAAAAPEAETERVEGEE 169


>gi|222537747 hypothetical protein LOC342979 [Homo sapiens]
          Length = 673

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 14/120 (11%)

Query: 2   SVPQIHVEEVGAEEGAGAAAPPDDHLRSLKALTEKLR----LETRRPSYLEWQARLEEHT 57
           S  ++  E  G EE  G     + HLR+ K   E+ R     E   P  +E +   EE  
Sbjct: 439 SAEKLGTEREGGEEPLGIERKVEGHLRAEKEGDEEKRGAEEEEVEEPLGVEKKGGEEE-- 496

Query: 58  WPFPRPAAEPQASLEEGERGGQEPLLPLREAGQH--PPSARSASQGARPLSTGKLEGFQS 115
              P    EP   LE   +GG+E L   +  G+          ++G   L  G  EG +S
Sbjct: 497 ---PEATKEP---LEAERKGGEETLEAEKRGGEESLETEKTQGTEGDLNLEQGSREGSES 550


>gi|157739942 gemin 5 [Homo sapiens]
          Length = 1508

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 18/166 (10%)

Query: 31  KALTEKLRLET-RRPSYLEWQARLEEHTWPFPRPAAEPQASLEEGERGGQEPLLPLREAG 89
           KA  +K +  T R P  LE     EE +        E   S +EGE   +EP LP   A 
Sbjct: 738 KAKPKKKKKPTLRTPVKLESIDGNEEESMKENSGPVENGVSDQEGEEQAREPELPCGLA- 796

Query: 90  QHPPSARSASQGARPLSTGKLEGFQSIDEAIAWLRKELTEMR---LQDQQLARQLMRLRG 146
              P+         P+S+G  +   +I+  +  L+KE  + +   L  ++ AR L+ L  
Sbjct: 797 ---PAVSREPVICTPVSSGFEKSKVTINNKVILLKKEPPKEKPETLIKKRKARSLLPLST 853

Query: 147 DI---NKLKIEHTCRL-----HRRMLN-DATYELEERDELADLFCD 183
            +   +K ++   C +     H R LN D + ++EER  L  LF D
Sbjct: 854 SLDHRSKEELHQDCLVLATAKHSRELNEDVSADVEERFHLG-LFTD 898


>gi|42822876 hypothetical protein LOC286343 [Homo sapiens]
          Length = 228

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 10/122 (8%)

Query: 36  KLRLETRRPSYLEWQARLEEHTWPFPRPAAEPQASLEEGERGGQEPLLPLREAGQHPPSA 95
           +L+L  + P  L    R EE   P PR           G  GG             PPS 
Sbjct: 13  ELKLGRKVPESLVRSLRGEE---PVPRERDRDPCGGSGGGGGGGGGCSSSSSYCSFPPSL 69

Query: 96  RSASQGARPLSTGKLEGFQS-----IDEAIAWLRKELTEMRLQDQQLARQLMRLRGDINK 150
            S+S  +   ++G   G  S     ++  +  LR+E+  +R  D +L RQL+ +   I  
Sbjct: 70  SSSSSSSP--TSGSPRGSHSSALERLETKLHLLRQEMVNLRATDVRLMRQLLVINESIES 127

Query: 151 LK 152
           +K
Sbjct: 128 IK 129


>gi|4758650 kinesin family member 5C [Homo sapiens]
          Length = 957

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 26  HLRSLKALTEKLR-LETRRPSYLEWQARLEEHTWPFPRPAAEPQASLEEGERGGQEPLLP 84
           H   +K+LT+ ++ +E +R    E Q  L E            + S ++ E+   E L  
Sbjct: 636 HEAKIKSLTDYMQNMEQKRRQLEESQDSLSEELAKLRAQEKMHEVSFQDKEK---EHLTR 692

Query: 85  LREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAIAWLRKELTEMRLQDQQLARQLMRL 144
           L++A +   +     +  R     +L   +   + I   +K + E+R  +Q+L  +  +L
Sbjct: 693 LQDAEEMKKALEQQMESHREAHQKQLSRLR---DEIEEKQKIIDEIRDLNQKLQLEQEKL 749

Query: 145 RGDINKLKIE 154
             D NKLKIE
Sbjct: 750 SSDYNKLKIE 759


>gi|110611228 utrophin [Homo sapiens]
          Length = 3433

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 116  IDEAIAWLRK-ELTEMRLQDQQLARQLMRLRG-----DINKLKIEHTCRLHRRMLNDATY 169
            +DE I WL K E    +    +L   L  LR      +++  K++   R    ML+D + 
Sbjct: 2093 LDEIICWLTKAEHAMQKRSTTELGENLQELRDLTQEMEVHAEKLKWLNRTELEMLSDKSL 2152

Query: 170  ELEERDELAD 179
             L ERD++++
Sbjct: 2153 SLPERDKISE 2162


>gi|58331144 proline rich region 18 [Homo sapiens]
          Length = 295

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 17/98 (17%)

Query: 13  AEEGAGAAAPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEHTWPFPRPAAEPQASLE 72
           A   +GA   PD   R    LT +  L  ++  +LE Q  L     PFP P+AEP+  L 
Sbjct: 119 AGTSSGAGPCPDSAARFCLNLTPEAVLVIQK-RHLEKQL-LARPRRPFPSPSAEPRRLL- 175

Query: 73  EGERGGQEPLLPLREAG-------QHPPSARSASQGAR 103
                   P LP R AG         P +  +A QG R
Sbjct: 176 -------APCLPARAAGPRRGGPASDPDAPPTAGQGRR 206


>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
            sapiens]
          Length = 1940

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 34/169 (20%), Positives = 70/169 (41%), Gaps = 26/169 (15%)

Query: 28   RSLKALTEKLRLETRRPSYLEWQARLEEHTWPFPRPAAEPQASLEEGE----RGGQEPLL 83
            ++ KA+T+   +        +  A LE       +   + Q  L+E E    +GG++ + 
Sbjct: 1755 KAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQ 1814

Query: 84   PLREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAIAWLRKELTEMRLQDQQLARQLMR 143
             L    +         +G +  +T  ++G +  +  +    KELT    +D+   + ++R
Sbjct: 1815 KLETRIRE---LEFELEGEQKKNTESVKGLRKYERRV----KELTYQSEEDR---KNVLR 1864

Query: 144  LRGDINKLKI------------EHTCRLHRRMLNDATYELEERDELADL 180
            L+  ++KL++            +     H      A +ELEE +E AD+
Sbjct: 1865 LQDLVDKLQVKVKSYKRQAEEADEQANAHLTKFRKAQHELEEAEERADI 1913


>gi|194473673 hypothetical protein LOC100170765 [Homo sapiens]
          Length = 130

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 13/102 (12%)

Query: 85  LREAGQHPPSARSASQGARPLSTGKLEGFQSIDEA----------IAWLRKELTEMRLQD 134
           L +AG  PP      Q  R +S  ++ G Q++  A          + W+R+EL  +R  D
Sbjct: 7   LNQAGLVPPGLGPPPQALREVSPVEIPG-QTLRTAGADTGGACDSLLWIREELGNLRRVD 65

Query: 135 QQLARQLMRLRGDINKLKIEHTCRLHRRMLNDATYELEERDE 176
            QL  QL  L  ++  L+ E    L      +++ E EE  E
Sbjct: 66  VQLLGQLCSLGLEMGALREELVTILEEE--EESSKEEEEDQE 105


>gi|115334682 SNAP25-interacting protein [Homo sapiens]
          Length = 1183

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 17/96 (17%)

Query: 65  AEPQASLE--EGERGGQEPLLPLREAGQH---------PPSARSASQGARPLSTGKLE-- 111
           +EP+   E  EG  G   P  P    G+          PP + S++   +P +  +L+  
Sbjct: 592 SEPETPSEKIEGSNGAATPSAPCGSGGRSSGATPVSGPPPPSASSTPAGQPTAVSRLQMQ 651

Query: 112 ----GFQSIDEAIAWLRKELTEMRLQDQQLARQLMR 143
               G Q+    +    ++L +++LQ+Q+  R L++
Sbjct: 652 LHLRGLQNSASDLRGQLQQLRKLQLQNQESVRALLK 687


>gi|66730423 hypothetical protein LOC389384 [Homo sapiens]
          Length = 652

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 16/94 (17%)

Query: 4   PQIHVEEVGAEEGAGAAAPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEHTWPFPRP 63
           PQ+  EEVG E        P  H R     +++ R   RR  Y +      +HT   PR 
Sbjct: 412 PQVQQEEVGVEN-------PAPHCRRK---SQEKRSSFRRAFYHK------KHTSKEPRR 455

Query: 64  AAEPQASLEEGERGGQEPLLPLREAGQHPPSARS 97
           A    A+  E  R  +   LPL   G  P ++ S
Sbjct: 456 AGAAGAASPEARRPKRPSFLPLCVGGHRPSTSSS 489


>gi|228008351 coiled-coil domain containing 48 [Homo sapiens]
          Length = 598

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 6/116 (5%)

Query: 27  LRSLKALTEKLRLETRRPSYLEWQARLEEHTWPFPRPAAE---PQ-ASLEEGERGGQEPL 82
           LRSL  + E   L  + P    W  RLE     +    ++   PQ A+ E G++  +   
Sbjct: 293 LRSLHRVRELEALAQQVPGLQRWVRRLEAELQRYRSEDSQLPTPQLANPEPGDKSNEPED 352

Query: 83  LPLREAGQHPPSA--RSASQGARPLSTGKLEGFQSIDEAIAWLRKELTEMRLQDQQ 136
              R+    P  A    +S G+R L     + F+S++   A   +E+ E R Q+++
Sbjct: 353 AGTRDPDPTPEGAWQSDSSSGSRALDEVDEQLFRSVEGQAASDEEEVEEERWQEEK 408


>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
          Length = 3571

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 55   EHTWPFPR-PAAEPQASLEEGERGGQEPLLPLREAGQHPPSARSASQGARP 104
            E T P P  PA +P+ S       G +P LPL      PP A +A    +P
Sbjct: 2355 EKTSPKPEYPAEKPKQSDPSPPSQGTKPALPLASTSSDPPQASTAQPQPQP 2405


>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
           [Homo sapiens]
          Length = 690

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%)

Query: 81  PLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAIAWLRKELTEMRLQD 134
           P+LP       PP +RS+SQ    L      G  S   A++WL +EL  + L D
Sbjct: 321 PILPPPPQASGPPRSRSSSQAEATL------GPSSTSNALSWLDEELLCLGLAD 368


>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
           [Homo sapiens]
          Length = 723

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%)

Query: 81  PLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAIAWLRKELTEMRLQD 134
           P+LP       PP +RS+SQ    L      G  S   A++WL +EL  + L D
Sbjct: 354 PILPPPPQASGPPRSRSSSQAEATL------GPSSTSNALSWLDEELLCLGLAD 401


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,867,794
Number of Sequences: 37866
Number of extensions: 421462
Number of successful extensions: 2271
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 2213
Number of HSP's gapped (non-prelim): 153
length of query: 214
length of database: 18,247,518
effective HSP length: 98
effective length of query: 116
effective length of database: 14,536,650
effective search space: 1686251400
effective search space used: 1686251400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.