Guide to the Human Genome
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Name: FAM167A Sequence: fasta or formatted (214aa) NCBI GI: 170784820
Description:

hypothetical protein LOC83648

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         20           3
 C cysteine            1.4          3           1
 D aspartate           4.2          9           2
 E glutamate          11.2         24           2
 F phenylalanine       2.3          5           1
 G glycine             5.6         12           2
 H histidine           2.8          6           1
 I isoleucine          3.3          7           1
 K lysine              3.7          8           1
 L leucine            14.0         30           2
 M methionine          2.3          5           1
 N asparagine          1.9          4           1
 P proline             7.0         15           2
 Q glutamine           5.1         11           2
 R arginine            9.8         21           2
 S serine              7.5         16           2
 T threonine           4.2          9           1
 V valine              1.9          4           1
 W tryptophan          1.4          3           1
 Y tyrosine            0.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC83648 
FAM167B               0.232   hypothetical protein LOC84734 
LOC400831             0.032   hypothetical protein LOC400831 
FOXO4                 0.030   forkhead box O4 
SPTBN4                0.025   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
OPHN1                 0.020   oligophrenin 1 
TNIK                  0.020   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.020   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.020   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.020   TRAF2 and NCK interacting kinase isoform 1 
MAPK8IP3              0.020   mitogen-activated protein kinase 8 interacting prote...
MAPK8IP3              0.020   mitogen-activated protein kinase 8 interacting prote...
CDKN1C                0.017   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.017   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.017   cyclin-dependent kinase inhibitor 1C isoform a 
CCDC96                0.017   coiled-coil domain containing 96 
PALM3                 0.017   hypothetical protein LOC342979 
GEMIN5                0.017   gemin 5 
C9orf150              0.017   hypothetical protein LOC286343 
KIF5C                 0.015   kinesin family member 5C 
UTRN                  0.015   utrophin 
PRR18                 0.015   proline rich region 18 
MYH3                  0.015   myosin, heavy chain 3, skeletal muscle, embryonic [H...
C19orf69              0.015   hypothetical protein LOC100170765 
SNIP                  0.015   SNAP25-interacting protein 
C6orf222              0.015   hypothetical protein LOC389384 
CCDC48                0.012   coiled-coil domain containing 48 
ZFHX4                 0.012   zinc finger homeodomain 4 
GGA3                  0.012   ADP-ribosylation factor binding protein 3 isoform sh...
GGA3                  0.012   ADP-ribosylation factor binding protein 3 isoform lo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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