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Search of human proteins with 170784817
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|170784817 transcription factor CP2-like 3 [Homo sapiens]
(625 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|170784817 transcription factor CP2-like 3 [Homo sapiens] 1250 0.0
gi|239735569 grainyhead-like 1 [Homo sapiens] 671 0.0
gi|38049009 sister-of-mammalian grainyhead protein isoform 2 [Ho... 493 e-139
gi|38049007 sister-of-mammalian grainyhead protein isoform 1 [Ho... 493 e-139
gi|42789723 sister-of-mammalian grainyhead protein isoform 3 [Ho... 409 e-114
gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo... 102 8e-22
gi|7657299 LBP-9 [Homo sapiens] 100 3e-21
gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo... 97 4e-20
gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo... 97 4e-20
gi|21361278 transcription factor CP2 [Homo sapiens] 95 2e-19
gi|223029510 echinoderm microtubule associated protein like 4 is... 34 0.46
gi|19923497 echinoderm microtubule associated protein like 4 iso... 34 0.46
gi|33149331 nucleoredoxin [Homo sapiens] 33 0.79
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 33 0.79
gi|222136619 myxovirus resistance protein 1 [Homo sapiens] 31 3.0
gi|222136617 myxovirus resistance protein 1 [Homo sapiens] 31 3.0
gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo s... 31 3.0
gi|239757041 PREDICTED: hypothetical protein LOC100128893 [Homo ... 30 5.1
gi|239751524 PREDICTED: hypothetical protein LOC100128893 [Homo ... 30 5.1
gi|239746035 PREDICTED: hypothetical protein LOC100128893 [Homo ... 30 5.1
gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens] 30 6.7
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 30 6.7
gi|163659918 sacsin [Homo sapiens] 30 8.7
gi|115527120 nebulin [Homo sapiens] 30 8.7
>gi|170784817 transcription factor CP2-like 3 [Homo sapiens]
Length = 625
Score = 1250 bits (3235), Expect = 0.0
Identities = 625/625 (100%), Positives = 625/625 (100%)
Query: 1 MSQESDNNKRLVALVPMPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDS 60
MSQESDNNKRLVALVPMPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDS
Sbjct: 1 MSQESDNNKRLVALVPMPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDS 60
Query: 61 AAALGLLYDYYKVPRDKRLLSVSKASDSQEDQEKRNCLGTSEAQSNLSGGENRVQVLKTV 120
AAALGLLYDYYKVPRDKRLLSVSKASDSQEDQEKRNCLGTSEAQSNLSGGENRVQVLKTV
Sbjct: 61 AAALGLLYDYYKVPRDKRLLSVSKASDSQEDQEKRNCLGTSEAQSNLSGGENRVQVLKTV 120
Query: 121 PVNLSLNQDHLENSKREQYSISFPESSAIIPVSGITVVKAEDFTPVFMAPPVHYPRGDGE 180
PVNLSLNQDHLENSKREQYSISFPESSAIIPVSGITVVKAEDFTPVFMAPPVHYPRGDGE
Sbjct: 121 PVNLSLNQDHLENSKREQYSISFPESSAIIPVSGITVVKAEDFTPVFMAPPVHYPRGDGE 180
Query: 181 EQRVVIFEQTQYDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATEKFRSASVGAEEYMY 240
EQRVVIFEQTQYDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATEKFRSASVGAEEYMY
Sbjct: 181 EQRVVIFEQTQYDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATEKFRSASVGAEEYMY 240
Query: 241 DQTSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVV 300
DQTSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVV
Sbjct: 241 DQTSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVV 300
Query: 301 MVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWD 360
MVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWD
Sbjct: 301 MVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWD 360
Query: 361 VNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKG 420
VNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKG
Sbjct: 361 VNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKG 420
Query: 421 AERKIRDEERKQNRKKGKGQASQTQCNSSSDGKLAAIPLQKKSDITYFKTMPDLHSQPVL 480
AERKIRDEERKQNRKKGKGQASQTQCNSSSDGKLAAIPLQKKSDITYFKTMPDLHSQPVL
Sbjct: 421 AERKIRDEERKQNRKKGKGQASQTQCNSSSDGKLAAIPLQKKSDITYFKTMPDLHSQPVL 480
Query: 481 FIPDVHFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEGTKRVLL 540
FIPDVHFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEGTKRVLL
Sbjct: 481 FIPDVHFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEGTKRVLL 540
Query: 541 YVRKETDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEH 600
YVRKETDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEH
Sbjct: 541 YVRKETDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEH 600
Query: 601 YSNEDTFILNMESMVEGFKVTLMEI 625
YSNEDTFILNMESMVEGFKVTLMEI
Sbjct: 601 YSNEDTFILNMESMVEGFKVTLMEI 625
>gi|239735569 grainyhead-like 1 [Homo sapiens]
Length = 618
Score = 671 bits (1732), Expect = 0.0
Identities = 363/638 (56%), Positives = 450/638 (70%), Gaps = 33/638 (5%)
Query: 1 MSQESDNNKRLVALVPMPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDS 60
M+QE DN + ++ L ++ + RR+YTSEDEAWKS+LENPLTAATKAMMSINGDEDS
Sbjct: 1 MTQEYDNKRPVLVL---QNEALYPQRRSYTSEDEAWKSFLENPLTAATKAMMSINGDEDS 57
Query: 61 AAALGLLYDYYKVPRDKRLLSVSKASDSQE-DQEKRNCLGTSEAQSNLSGGENRVQVLKT 119
AAALGLLYDYYKVPR++R + + E D KRN + Q +S GENRVQVLK
Sbjct: 58 AAALGLLYDYYKVPRERRSSTAKPEVEHPEPDHSKRNSIPIVTEQPLISAGENRVQVLKN 117
Query: 120 VPVNLSL-NQDHLENSKREQYSI---SFPESSAIIPVSGITVVKAEDFTPVFMAPPVHYP 175
VP N+ L + + L KR + + S A +P I V + P V++P
Sbjct: 118 VPFNIVLPHGNQLGIDKRGHLTAPDTTVTVSIATMPTHSIKTETQPHGFAVGIPPAVYHP 177
Query: 176 RGDGEEQRVVIFEQTQYDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATEKF------- 228
+RVV+F++ + A + QR TPDST+SE+FK+ E F
Sbjct: 178 E---PTERVVVFDRNLNT--DQFSSGAQAPNAQRRTPDSTFSETFKEGVQEVFFPSDLSL 232
Query: 229 RSASVGAEEYMYDQTSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKC 288
R + +E+Y++D S F+YTLEA+KSLRQK G+ MTYLNKGQFY ITL E ++
Sbjct: 233 RMPGMNSEDYVFDSVSGNNFEYTLEASKSLRQKPGDSTMTYLNKGQFYPITLKEVSSSEG 292
Query: 289 FRHPISKVRSVVMVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIE 348
HPISKVRSV+MVVF+EDK+R++QL++WKYWHSRQHTAKQR +DIADYKESFNTI NIE
Sbjct: 293 IHHPISKVRSVIMVVFAEDKSREDQLRHWKYWHSRQHTAKQRCIDIADYKESFNTISNIE 352
Query: 349 EIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHR 408
EIAYNA+SFTWD+N+EAK+FI+VNCLSTDFSSQKGVKGLPL IQ+DTYSYNNRSNKP+HR
Sbjct: 353 EIAYNAISFTWDINDEAKVFISVNCLSTDFSSQKGVKGLPLNIQVDTYSYNNRSNKPVHR 412
Query: 409 AYCQIKVFCDKGAERKIRDEERKQNRKKGKGQASQTQCNSSSDGKLAAIPLQKKSDITYF 468
AYCQIKVFCDKGAERKIRDEERKQ+++K SD K+ +P K+ DIT F
Sbjct: 413 AYCQIKVFCDKGAERKIRDEERKQSKRK------------VSDVKVPLLPSHKRMDITVF 460
Query: 469 KTMPDLHSQPVLFIPDVHFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPS- 527
K DL +QPVLFIPDVHFANLQR V +E EG ++KR E++F PS
Sbjct: 461 KPFIDLDTQPVLFIPDVHFANLQRGTHVLPIASEELEGEGSVLKRGPYGTEDDFAVPPST 520
Query: 528 KQMKEEGTKRVLLYVRKETDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKK 587
K + E KRVLLYVRKE+++VFDALMLK+P++KGLMEAIS+KY +P +KI K++KK KK
Sbjct: 521 KLARIEEPKRVLLYVRKESEEVFDALMLKTPSLKGLMEAISDKYDVPHDKIGKIFKKCKK 580
Query: 588 GILVNMDDNIIEHYSNEDTFILNMESMVEGFKVTLMEI 625
GILVNMDDNI++HYSNEDTF L +E +K+TL EI
Sbjct: 581 GILVNMDDNIVKHYSNEDTFQLQIEEAGGSYKLTLTEI 618
>gi|38049009 sister-of-mammalian grainyhead protein isoform 2 [Homo
sapiens]
Length = 602
Score = 493 bits (1269), Expect = e-139
Identities = 285/620 (45%), Positives = 388/620 (62%), Gaps = 41/620 (6%)
Query: 17 MPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDSAAALGLLYDYYKVPRD 76
+ +DP + +YTSEDEAWK+YLENPLTAATKAMM +NGD+DS AAL LYDYY P++
Sbjct: 13 LKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYYMGPKE 72
Query: 77 KRLLSVSKASDSQEDQEKRNCLGTSEAQSNLSGGENRVQVLKTVPVNLSLNQDHLENSKR 136
KR+LS S + + DQ KR G E +++L+ E+ ++K + N+S ++ + K+
Sbjct: 73 KRILSSS--TGGRNDQGKRYYHGM-EYETDLTPLESPTHLMKFLTENVSGTPEYPDLLKK 129
Query: 137 EQY-----SISFPESSAIIPVSGITVVKAEDFTPVFMAPPVHYPRGDGEEQRVVIFEQTQ 191
++ P +A +P +G + ++A + Y G +FE
Sbjct: 130 NNLMSLEGALPTPGKAAPLP-AGPSKLEAGSVDSYLLPTTDMYDNGSLNS----LFESIH 184
Query: 192 YDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATE----KFRSASVGAEEYMYDQTSSGT 247
P+ QR PDST+ + +++ K E+Y +
Sbjct: 185 GVPPT-----------QRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDY---PSLKSD 230
Query: 248 FQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSED 307
F+YTL + K++ K GE PM YLNKGQFY +TL K +KV+SVVMVVF +
Sbjct: 231 FEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNE 290
Query: 308 KNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKI 367
K EQL++WK+WHSRQ TAKQRV+D+AD KE+FNT+ +IEE+AYNA+SF W+VNEEAK+
Sbjct: 291 KVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKV 350
Query: 368 FITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRD 427
FI VNCLSTDFSSQKGVKG+PL +QIDTY + + +HRA CQIK+FCDKGAERK+RD
Sbjct: 351 FIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRD 410
Query: 428 EERKQNRKKGKGQASQTQCNSSSDGKLAAIPLQ--KKSDITYFKTMPDLHSQPVLFIPDV 485
+ERKQ R+K K C SS+ + L + ++ TY + DL + PVLFIP+V
Sbjct: 411 DERKQFRRKVK-------CPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNV 463
Query: 486 HFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEGTKRVLLYVRKE 545
HF++LQR+G + + +KR P EEF P+PSKQ KE +RVLLYVR+E
Sbjct: 464 HFSSLQRSGGAAPSAGPS-SSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRE 522
Query: 546 TDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEHYSNED 605
T++VFDALMLK+P +KGL AISEKYG P E I K+YKK K+GILVNMD+NII+HYSN
Sbjct: 523 TEEVFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHV 582
Query: 606 TFILNMESMVEGFKVTLMEI 625
F+L+M + ++ L E+
Sbjct: 583 AFLLDMGELDGKIQIILKEL 602
>gi|38049007 sister-of-mammalian grainyhead protein isoform 1 [Homo
sapiens]
Length = 607
Score = 493 bits (1269), Expect = e-139
Identities = 285/620 (45%), Positives = 388/620 (62%), Gaps = 41/620 (6%)
Query: 17 MPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDSAAALGLLYDYYKVPRD 76
+ +DP + +YTSEDEAWK+YLENPLTAATKAMM +NGD+DS AAL LYDYY P++
Sbjct: 18 LKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYYMGPKE 77
Query: 77 KRLLSVSKASDSQEDQEKRNCLGTSEAQSNLSGGENRVQVLKTVPVNLSLNQDHLENSKR 136
KR+LS S + + DQ KR G E +++L+ E+ ++K + N+S ++ + K+
Sbjct: 78 KRILSSS--TGGRNDQGKRYYHGM-EYETDLTPLESPTHLMKFLTENVSGTPEYPDLLKK 134
Query: 137 EQY-----SISFPESSAIIPVSGITVVKAEDFTPVFMAPPVHYPRGDGEEQRVVIFEQTQ 191
++ P +A +P +G + ++A + Y G +FE
Sbjct: 135 NNLMSLEGALPTPGKAAPLP-AGPSKLEAGSVDSYLLPTTDMYDNGSLNS----LFESIH 189
Query: 192 YDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATE----KFRSASVGAEEYMYDQTSSGT 247
P+ QR PDST+ + +++ K E+Y +
Sbjct: 190 GVPPT-----------QRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDY---PSLKSD 235
Query: 248 FQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSED 307
F+YTL + K++ K GE PM YLNKGQFY +TL K +KV+SVVMVVF +
Sbjct: 236 FEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNE 295
Query: 308 KNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKI 367
K EQL++WK+WHSRQ TAKQRV+D+AD KE+FNT+ +IEE+AYNA+SF W+VNEEAK+
Sbjct: 296 KVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKV 355
Query: 368 FITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRD 427
FI VNCLSTDFSSQKGVKG+PL +QIDTY + + +HRA CQIK+FCDKGAERK+RD
Sbjct: 356 FIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRD 415
Query: 428 EERKQNRKKGKGQASQTQCNSSSDGKLAAIPLQ--KKSDITYFKTMPDLHSQPVLFIPDV 485
+ERKQ R+K K C SS+ + L + ++ TY + DL + PVLFIP+V
Sbjct: 416 DERKQFRRKVK-------CPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNV 468
Query: 486 HFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEGTKRVLLYVRKE 545
HF++LQR+G + + +KR P EEF P+PSKQ KE +RVLLYVR+E
Sbjct: 469 HFSSLQRSGGAAPSAGPS-SSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRE 527
Query: 546 TDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEHYSNED 605
T++VFDALMLK+P +KGL AISEKYG P E I K+YKK K+GILVNMD+NII+HYSN
Sbjct: 528 TEEVFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHV 587
Query: 606 TFILNMESMVEGFKVTLMEI 625
F+L+M + ++ L E+
Sbjct: 588 AFLLDMGELDGKIQIILKEL 607
>gi|42789723 sister-of-mammalian grainyhead protein isoform 3 [Homo
sapiens]
Length = 509
Score = 409 bits (1051), Expect = e-114
Identities = 219/424 (51%), Positives = 286/424 (67%), Gaps = 17/424 (4%)
Query: 208 QRSTPDSTYSESFKDAATE----KFRSASVGAEEYMYDQTSSGTFQYTLEATKSLRQKQG 263
QR PDST+ + +++ K E+Y + F+YTL + K++ K G
Sbjct: 97 QRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDY---PSLKSDFEYTLGSPKAIHIKSG 153
Query: 264 EGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSEDKNRDEQLKYWKYWHSR 323
E PM YLNKGQFY +TL K +KV+SVVMVVF +K EQL++WK+WHSR
Sbjct: 154 ESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPVEQLRFWKHWHSR 213
Query: 324 QHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKG 383
Q TAKQRV+D+AD KE+FNT+ +IEE+AYNA+SF W+VNEEAK+FI VNCLSTDFSSQKG
Sbjct: 214 QPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKG 273
Query: 384 VKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRDEERKQNRKKGKGQASQ 443
VKG+PL +QIDTY + + +HRA CQIK+FCDKGAERK+RD+ERKQ R+K K
Sbjct: 274 VKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKVK----- 328
Query: 444 TQCNSSSDGKLAAIPLQ--KKSDITYFKTMPDLHSQPVLFIPDVHFANLQRTGQVYYNTD 501
C SS+ + L + ++ TY + DL + PVLFIP+VHF++LQR+G +
Sbjct: 329 --CPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAAPSAG 386
Query: 502 DEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEGTKRVLLYVRKETDDVFDALMLKSPTVK 561
+ +KR P EEF P+PSKQ KE +RVLLYVR+ET++VFDALMLK+P +K
Sbjct: 387 PS-SSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLKTPDLK 445
Query: 562 GLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEHYSNEDTFILNMESMVEGFKVT 621
GL AISEKYG P E I K+YKK K+GILVNMD+NII+HYSN F+L+M + ++
Sbjct: 446 GLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQII 505
Query: 622 LMEI 625
L E+
Sbjct: 506 LKEL 509
>gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo
sapiens]
Length = 504
Score = 102 bits (255), Expect = 8e-22
Identities = 110/445 (24%), Positives = 183/445 (41%), Gaps = 89/445 (20%)
Query: 242 QTSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSET---GDNKCFRHPISKVRS 298
+T FQY + A S K + +TYLN+GQ Y I + + GD + V+S
Sbjct: 58 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKL--VKS 115
Query: 299 VVMVVFSEDK---NRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGN-IEEIAYNA 354
++ VVF + + +QL+ WK+ + R+LD+ D S I NA
Sbjct: 116 IIRVVFHDRRLQYTEHQQLEGWKW-----NRPGDRLLDL-DIPMSVGIIDTRTNPSQLNA 169
Query: 355 VSFTWDVNEEAKIFITVNCLSTDFSSQK--GVKGLPLMIQIDTYSYNNRS--NKPIHRAY 410
V F WD + FI V+C+ST+F+ +K G KG+P IQ+DT+ N +H A
Sbjct: 170 VEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSAS 229
Query: 411 CQIKVFCDKGAERKIRDEERKQNRK----KGKGQASQ-----TQCNSSSDGKLAAIPLQK 461
CQIKVF KGA+RK + + K ++ K K Q S T+C+ D A +
Sbjct: 230 CQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSP 289
Query: 462 KSDITYFKTMPDLHSQPVLFIPDVHFANLQRTGQVYYNTDDE--------REGGSVLVKR 513
T+ T P Q +PD + ++ G T E +E L+K
Sbjct: 290 SPAPTF--TSP---QQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKN 344
Query: 514 MFRPMEEEF----GPVPSKQMKEEGTK---------------------RVLLYVRKETDD 548
F F G K KE+ + R+ +YV +E
Sbjct: 345 RFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPS 404
Query: 549 -----------------------VFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKS 585
V+ A+ L+ + ++ + +P+ +I ++Y++
Sbjct: 405 STVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQG 464
Query: 586 KKGILVNMDDNIIEHYSNEDTFILN 610
GI + + D +++++ +E F+ +
Sbjct: 465 PTGIHILVSDQMVQNFQDESCFLFS 489
>gi|7657299 LBP-9 [Homo sapiens]
Length = 479
Score = 100 bits (250), Expect = 3e-21
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 249 QYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISK-VRSVVMVVFSED 307
QY L A S K E +TYLN+GQ Y I L E F+ +K V+S++ VVF +
Sbjct: 48 QYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDR 107
Query: 308 K---NRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIG-NIEEIAYNAVSFTWDVNE 363
+ +QL+ W++ R+LDI D S + NAV F WD +
Sbjct: 108 RLQYTEHQQLEGWRW-----SRPGDRILDI-DIPLSVGILDPRASPTQLNAVEFLWDPAK 161
Query: 364 EAKIFITVNCLSTDFSSQK--GVKGLPLMIQIDTYSYNNRS--NKPIHRAYCQIKVFCDK 419
A FI V+C+ST+F+ +K G KG+P +QIDT+ N + +H A CQIKVF K
Sbjct: 162 RASAFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPK 221
Query: 420 GAERKIRDEERKQNRK 435
GA+RK + + K ++
Sbjct: 222 GADRKQKTDREKMEKR 237
>gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo
sapiens]
Length = 540
Score = 97.1 bits (240), Expect = 4e-20
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 242 QTSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSET---GDNKCFRHPISKVRS 298
+T FQY + A S K + +TYLN+GQ Y I + + GD + V+S
Sbjct: 58 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKL--VKS 115
Query: 299 VVMVVFSEDK---NRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGN-IEEIAYNA 354
++ VVF + + +QL+ WK+ + R+LD+ D S I NA
Sbjct: 116 IIRVVFHDRRLQYTEHQQLEGWKW-----NRPGDRLLDL-DIPMSVGIIDTRTNPSQLNA 169
Query: 355 VSFTWDVNEEAKIFITVNCLSTDFSSQK--GVKGLPLMIQIDTYSYNNRS--NKPIHRAY 410
V F WD + FI V+C+ST+F+ +K G KG+P IQ+DT+ N +H A
Sbjct: 170 VEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSAS 229
Query: 411 CQIKVFCDKGAERKIRDEERKQNRK 435
CQIKVF KGA+RK + + K ++
Sbjct: 230 CQIKVFKPKGADRKQKTDREKMEKR 254
>gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo
sapiens]
Length = 540
Score = 97.1 bits (240), Expect = 4e-20
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 242 QTSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSET---GDNKCFRHPISKVRS 298
+T FQY + A S K + +TYLN+GQ Y I + + GD + V+S
Sbjct: 58 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKL--VKS 115
Query: 299 VVMVVFSEDK---NRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGN-IEEIAYNA 354
++ VVF + + +QL+ WK+ + R+LD+ D S I NA
Sbjct: 116 IIRVVFHDRRLQYTEHQQLEGWKW-----NRPGDRLLDL-DIPMSVGIIDTRTNPSQLNA 169
Query: 355 VSFTWDVNEEAKIFITVNCLSTDFSSQK--GVKGLPLMIQIDTYSYNNRS--NKPIHRAY 410
V F WD + FI V+C+ST+F+ +K G KG+P IQ+DT+ N +H A
Sbjct: 170 VEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSAS 229
Query: 411 CQIKVFCDKGAERKIRDEERKQNRK 435
CQIKVF KGA+RK + + K ++
Sbjct: 230 CQIKVFKPKGADRKQKTDREKMEKR 254
>gi|21361278 transcription factor CP2 [Homo sapiens]
Length = 502
Score = 95.1 bits (235), Expect = 2e-19
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 248 FQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISK---VRSVVMVVF 304
FQY L A S K + +TYLN+GQ Y I + + + K P V+S+ VVF
Sbjct: 67 FQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLD--NRKLGELPEINGKLVKSIFRVVF 124
Query: 305 SEDK---NRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIG-NIEEIAYNAVSFTWD 360
+ + +QL+ W++ + R+LDI D S I N V F WD
Sbjct: 125 HDRRLQYTEHQQLEGWRW-----NRPGDRILDI-DIPMSVGIIDPRANPTQLNTVEFLWD 178
Query: 361 VNEEAKIFITVNCLSTDFSSQK--GVKGLPLMIQIDTYSYNNRS--NKPIHRAYCQIKVF 416
+ +FI V+C+ST+F+ +K G KG+P +QIDT+ N + +H A CQIKVF
Sbjct: 179 PAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVF 238
Query: 417 CDKGAERKIRDEERKQNRK 435
KGA+RK + + K ++
Sbjct: 239 KPKGADRKQKTDREKMEKR 257
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 508 SVLVKRMFRPMEEEFGPVPSKQMKEEGTKRVLLYVRKETDD------VFDALMLKSPTVK 561
+ L RM RP + S Q++E+ ++ + E D V+ A+ L+ T
Sbjct: 379 NALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAV 438
Query: 562 GLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEHYSNEDTFILN 610
L E I++ + + +I+++YK+ GI V + D +I+++ E FIL+
Sbjct: 439 ELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQEEACFILD 487
>gi|223029510 echinoderm microtubule associated protein like 4
isoform b [Homo sapiens]
Length = 923
Score = 33.9 bits (76), Expect = 0.46
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 100 TSEAQSNLSGGENRVQ-----------VLKTVPVNLSLNQDHLENSKREQYSISFPESSA 148
TS+ Q LS E+RVQ L V L++++DH+ + K+ S P A
Sbjct: 17 TSDVQDRLSALESRVQQQEDEITVLKAALADVLRRLAISEDHVASVKKSVSSKGQPSPRA 76
Query: 149 IIPVSGIT 156
+IP+S IT
Sbjct: 77 VIPMSCIT 84
>gi|19923497 echinoderm microtubule associated protein like 4
isoform a [Homo sapiens]
Length = 981
Score = 33.9 bits (76), Expect = 0.46
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 100 TSEAQSNLSGGENRVQ-----------VLKTVPVNLSLNQDHLENSKREQYSISFPESSA 148
TS+ Q LS E+RVQ L V L++++DH+ + K+ S P A
Sbjct: 17 TSDVQDRLSALESRVQQQEDEITVLKAALADVLRRLAISEDHVASVKKSVSSKGQPSPRA 76
Query: 149 IIPVSGIT 156
+IP+S IT
Sbjct: 77 VIPMSCIT 84
>gi|33149331 nucleoredoxin [Homo sapiens]
Length = 435
Score = 33.1 bits (74), Expect = 0.79
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 475 HSQPVLFIPDVHFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEG 534
H +PVL + D + A L + D E +G S K++ +P+ E+ + +K +E
Sbjct: 308 HPKPVLELSDSNAAQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEK---IIAKYKAKEE 364
Query: 535 TKRVLLYVRKETDDVFDALM------LKSPTVKGLMEAISEKYGLPVEKI 578
+L +V E DD+ D+L +P + L + KY + VE+I
Sbjct: 365 EAPLLFFVAGE-DDMTDSLRDYTNLPEAAPLLTILDMSARAKYVMDVEEI 413
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 33.1 bits (74), Expect = 0.79
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 17/148 (11%)
Query: 303 VFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFN--TIGNIEEIAYNAVSFTWD 360
+ + D++ + +K W+Y H+ A Q LD D +ES + ++ +A A +
Sbjct: 1032 MLTRDRDFENSMKMWEYKHTEIQAAPQPQLDFQDSQESLSDEEYAQMQHLARLAENLISK 1091
Query: 361 VNEEAKIFITVNCLSTDFSSQKGV-------------KGLPLMIQIDTYSYNNRSNK--P 405
+N+ +KI V+ L ++ + G I I+T S N+ +
Sbjct: 1092 LNDLSKIHQHVSVLMGSVNASANILNDIFYGQDSGNEMGAASCIPIETLSRNDAVDVTFS 1151
Query: 406 IHRAYCQIKVFCDKGAERKIRDEERKQN 433
+ Y F D+ R DE Q+
Sbjct: 1152 LKGLYDDTTAFLDEKLLRSAEDETALQS 1179
>gi|222136619 myxovirus resistance protein 1 [Homo sapiens]
Length = 662
Score = 31.2 bits (69), Expect = 3.0
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 410 YCQIKVFCDKGAERKIRDEERKQNRKKGKGQASQTQCNSSSDGKLAAI 457
YCQ +V+ +GA +K+R++E ++ +KK Q +S++D + I
Sbjct: 532 YCQDQVY--RGALQKVREKELEEEKKKKSWDFGAFQSSSATDSSMEEI 577
>gi|222136617 myxovirus resistance protein 1 [Homo sapiens]
Length = 662
Score = 31.2 bits (69), Expect = 3.0
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 410 YCQIKVFCDKGAERKIRDEERKQNRKKGKGQASQTQCNSSSDGKLAAI 457
YCQ +V+ +GA +K+R++E ++ +KK Q +S++D + I
Sbjct: 532 YCQDQVY--RGALQKVREKELEEEKKKKSWDFGAFQSSSATDSSMEEI 577
>gi|56687498 DnaJ (Hsp40) homolog, subfamily C, member 16 [Homo
sapiens]
Length = 782
Score = 31.2 bits (69), Expect = 3.0
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 413 IKVFCDKGAERKIRDEERKQNRKK-GKGQASQTQCNSSSDGKLAAIPLQKKSDITYFKTM 471
++ F D ER+ E+++ ++K GK + S T+ NSS K + + + +D+TY +
Sbjct: 556 VQAFSDSNDERESSPPEKEEAQEKTGKTEPSFTKENSSKIPKKGFVEVTELTDVTYTSNL 615
Query: 472 PDL---HSQPVLFI 482
L H VL +
Sbjct: 616 VRLRPGHMNVVLIL 629
>gi|239757041 PREDICTED: hypothetical protein LOC100128893 [Homo
sapiens]
Length = 82
Score = 30.4 bits (67), Expect = 5.1
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 201 SAYLKDDQRSTPDSTYSESFKDAATEKFRSASVGAEEYMYDQTSSGTFQYTLEATKSLRQ 260
SA++ D R P + +S S DAA + + G E SSG + ++LR
Sbjct: 2 SAWISLDTRYPPGTCFSRSSADAAGGRAGPGAAGTE------VSSGVDIDRFDNVRALRA 55
Query: 261 KQGEGPMTYLNKGQFYAITLSETGDNK 287
++G T F I G NK
Sbjct: 56 REGTRHFTLQIPNLFLKIMFKTYGKNK 82
>gi|239751524 PREDICTED: hypothetical protein LOC100128893 [Homo
sapiens]
Length = 82
Score = 30.4 bits (67), Expect = 5.1
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 201 SAYLKDDQRSTPDSTYSESFKDAATEKFRSASVGAEEYMYDQTSSGTFQYTLEATKSLRQ 260
SA++ D R P + +S S DAA + + G E SSG + ++LR
Sbjct: 2 SAWISLDTRYPPGTCFSRSSADAAGGRAGPGAAGTE------VSSGVDIDRFDNVRALRA 55
Query: 261 KQGEGPMTYLNKGQFYAITLSETGDNK 287
++G T F I G NK
Sbjct: 56 REGTRHFTLQIPNLFLKIMFKTYGKNK 82
>gi|239746035 PREDICTED: hypothetical protein LOC100128893 [Homo
sapiens]
Length = 82
Score = 30.4 bits (67), Expect = 5.1
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 201 SAYLKDDQRSTPDSTYSESFKDAATEKFRSASVGAEEYMYDQTSSGTFQYTLEATKSLRQ 260
SA++ D R P + +S S DAA + + G E SSG + ++LR
Sbjct: 2 SAWISLDTRYPPGTCFSRSSADAAGGRAGPGAAGTE------VSSGVDIDRFDNVRALRA 55
Query: 261 KQGEGPMTYLNKGQFYAITLSETGDNK 287
++G T F I G NK
Sbjct: 56 REGTRHFTLQIPNLFLKIMFKTYGKNK 82
>gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens]
Length = 840
Score = 30.0 bits (66), Expect = 6.7
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 418 DKGAERKIRDEERKQNRKKGKGQASQTQCNSSSDGKL 454
DK +E +I+D ++ +K G + ++Q SSS+ K+
Sbjct: 21 DKNSETEIQDSQKNLAKKSGPKETIKSQAKSSSESKI 57
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 30.0 bits (66), Expect = 6.7
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 396 YSYNNRSNKPIHRAYCQIKVFCDKGAERKIRDEERKQNRKKGKGQASQTQCNSSSDGKLA 455
Y YN ++ + A K+F K A+ + E KGKG+ S+ ++A
Sbjct: 113 YIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQSAGTQQVA 172
Query: 456 AIPLQKKSDITYFKTMPDLHSQ-PVL 480
A+ S T F+++P SQ PV+
Sbjct: 173 AV--SSVSPATPFQSVPPTVSQTPVI 196
>gi|163659918 sacsin [Homo sapiens]
Length = 4579
Score = 29.6 bits (65), Expect = 8.7
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 29/103 (28%)
Query: 334 IADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQI 393
+A + + F G+IEE+ + +S KI++ + D S Q+ + L LM+ I
Sbjct: 1311 MAKFHQLFKVCGSIEELTSDHISMVIQ-----KIYLKSD---QDLSEQESKQNLHLMLNI 1362
Query: 394 DTYSYNNR--------------------SNKPIHR-AYCQIKV 415
+ Y+N+ KPIH YC IKV
Sbjct: 1363 IRWLYSNQIPASPNTPVPIHHSKNPSKLIMKPIHECCYCDIKV 1405
>gi|115527120 nebulin [Homo sapiens]
Length = 6669
Score = 29.6 bits (65), Expect = 8.7
Identities = 48/232 (20%), Positives = 88/232 (37%), Gaps = 33/232 (14%)
Query: 419 KGAERKIRDEERKQNRKKGKGQASQTQCNSSSDGKLAAIPLQKKSDITYFK-TMPDLHSQ 477
K + + D K+ K KG+++ + + K A +K+SD+ Y K +LH
Sbjct: 5678 KEVTKHVSDTNYKKKFVKEKGKSNYSIMLEPPEVKHAMEVAKKQSDVAYRKDAKENLHYT 5737
Query: 478 PVLFIPDVHFAN--LQRTGQVYYNTDDEREGGSVLVKRMFRP------------------ 517
V PD+ A ++ +V Y +EG L + RP
Sbjct: 5738 TVADRPDIKKATQAAKQASEVEYRAKHRKEGSHGL-SMLGRPDIEMAKKAAKLSSQVKYR 5796
Query: 518 --MEEEFGPVPSKQMKEEGTKRVLLYVRKETDDV---FDALMLKSPTVKGLMEAISEKYG 572
++E G P K+ +V+ +V D L P V + E++ +
Sbjct: 5797 ENFDKEKGKTPKYNPKDSQLYKVMKDANNLASEVKYKADLKKLHKP-VTDMKESLIMNHV 5855
Query: 573 LPVEKIAKLYKKSK-----KGILVNMDDNIIEHYSNEDTFILNMESMVEGFK 619
L ++A Y+ K KG + DN+ + + E T + ++ E ++
Sbjct: 5856 LNTSQLASSYQYKKKYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYE 5907
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,897,077
Number of Sequences: 37866
Number of extensions: 1017291
Number of successful extensions: 2229
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2185
Number of HSP's gapped (non-prelim): 29
length of query: 625
length of database: 18,247,518
effective HSP length: 108
effective length of query: 517
effective length of database: 14,157,990
effective search space: 7319680830
effective search space used: 7319680830
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.