Guide to the Human Genome
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Name: PHKA2 Sequence: fasta or formatted (1235aa) NCBI GI: 4505781
Description:

phosphorylase kinase, alpha 2 (liver)

Referenced in:

Glycogen

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         74           2
 C cysteine            1.5         19           2
 D aspartate           5.6         69           2
 E glutamate           6.2         76           2
 F phenylalanine       3.4         42           2
 G glycine             6.6         81           2
 H histidine           3.2         39           2
 I isoleucine          5.8         72           2
 K lysine              4.5         56           2
 L leucine            11.2        138           2
 M methionine          2.5         31           2
 N asparagine          3.6         44           2
 P proline             4.4         54           2
 Q glutamine           4.9         60           2
 R arginine            5.4         67           4
 S serine              8.3        102           3
 T threonine           5.4         67           2
 V valine              7.1         88           3
 W tryptophan          1.1         14           1
 Y tyrosine            3.4         42           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphorylase kinase, alpha 2 (liver) 
PHKA1                 0.677   phosphorylase kinase, alpha 1 (muscle) isoform 1 [H...
PHKA1                 0.674   phosphorylase kinase, alpha 1 (muscle) isoform 2 [H...
PHKB                  0.180   phosphorylase kinase, beta isoform b 
PHKB                  0.180   phosphorylase kinase, beta isoform a 
PNN                   0.004   pinin, desmosome associated protein 
LMTK2                 0.004   lemur tyrosine kinase 2 
SRRM2                 0.004   splicing coactivator subunit SRm300 
NCAPD3                0.004   non-SMC condensin II complex, subunit D3 
EVI5                  0.003   ecotropic viral integration site 5 
RLIM                  0.003   ring finger protein, LIM domain interacting 
RLIM                  0.003   ring finger protein, LIM domain interacting 
HAUS4                 0.002   HAUS augmin-like complex, subunit 4 
C19orf29              0.002   chromosome 19 open reading frame 29 
C19orf29              0.002   chromosome 19 open reading frame 29 
ARL6IP4               0.002   SRp25 nuclear protein isoform 4 
ARL6IP4               0.002   SRp25 nuclear protein isoform 2 
CPEB4                 0.002   cytoplasmic polyadenylation element binding protein...
PCLO                  0.002   piccolo isoform 2 
PCLO                  0.002   piccolo isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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