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Search of human proteins with 169218236
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169218236 PREDICTED: FSHD region gene 2-like [Homo sapiens]
(282 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169217518 PREDICTED: FSHD region gene 2-like [Homo sapiens] 577 e-165
gi|169218236 PREDICTED: FSHD region gene 2-like [Homo sapiens] 577 e-165
gi|185136049 FSHD region gene 2 family, member C [Homo sapiens] 557 e-159
gi|124487405 FSHD region gene 2 family, member B [Homo sapiens] 539 e-154
gi|239747159 PREDICTED: hypothetical protein XP_002343930 [Homo ... 536 e-153
gi|52353320 FSHD region gene 2 [Homo sapiens] 536 e-153
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ... 262 3e-70
gi|239753769 PREDICTED: similar to FSHD region gene 2 family, me... 128 6e-30
gi|239748331 PREDICTED: similar to FSHD region gene 2 family, me... 128 6e-30
gi|239742234 PREDICTED: similar to FSHD region gene 2 family, me... 128 6e-30
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 41 0.001
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 41 0.001
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 37 0.015
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 36 0.043
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 35 0.074
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 35 0.074
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 35 0.074
gi|31340735 zinc finger protein 445 [Homo sapiens] 35 0.074
gi|50962882 G patch domain containing 8 [Homo sapiens] 35 0.074
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 35 0.097
gi|153792012 DNA polymerase zeta [Homo sapiens] 35 0.097
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 35 0.097
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 34 0.13
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 34 0.13
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 34 0.13
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 34 0.13
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 34 0.13
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 34 0.13
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 34 0.13
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 34 0.13
>gi|169217518 PREDICTED: FSHD region gene 2-like [Homo sapiens]
Length = 282
Score = 577 bits (1488), Expect = e-165
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA
Sbjct: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
Query: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS 120
GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS
Sbjct: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS 120
Query: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV 180
LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV
Sbjct: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV 180
Query: 181 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 240
RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES
Sbjct: 181 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 240
Query: 241 WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKLGAP 282
WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKLGAP
Sbjct: 241 WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKLGAP 282
>gi|169218236 PREDICTED: FSHD region gene 2-like [Homo sapiens]
Length = 282
Score = 577 bits (1488), Expect = e-165
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA
Sbjct: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
Query: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS 120
GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS
Sbjct: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS 120
Query: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV 180
LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV
Sbjct: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV 180
Query: 181 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 240
RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES
Sbjct: 181 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 240
Query: 241 WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKLGAP 282
WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKLGAP
Sbjct: 241 WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKLGAP 282
>gi|185136049 FSHD region gene 2 family, member C [Homo sapiens]
Length = 282
Score = 557 bits (1435), Expect = e-159
Identities = 272/282 (96%), Positives = 278/282 (98%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA
Sbjct: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
Query: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS 120
GS+PNPNKENSEETKLKAGNSTAGSEPESSSY+ENCRKRKISSKD CQDRAGNCPEEEC+
Sbjct: 61 GSDPNPNKENSEETKLKAGNSTAGSEPESSSYQENCRKRKISSKDICQDRAGNCPEEECN 120
Query: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV 180
LTLNKKSRSSTAVHNSEIQETCDAHHRG SRACTG SK+HRS+AL VQTPSLRKSLVTSV
Sbjct: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGSSRACTGRSKRHRSRALEVQTPSLRKSLVTSV 180
Query: 181 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 240
RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES
Sbjct: 181 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 240
Query: 241 WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKLGAP 282
WLVPATLPGPG+SALDREAHPFPGQEITEPVSGSDEAKLGAP
Sbjct: 241 WLVPATLPGPGDSALDREAHPFPGQEITEPVSGSDEAKLGAP 282
>gi|124487405 FSHD region gene 2 family, member B [Homo sapiens]
Length = 278
Score = 539 bits (1389), Expect = e-154
Identities = 266/279 (95%), Positives = 272/279 (97%), Gaps = 1/279 (0%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFK KGKTAFSHSSEKH QRQ
Sbjct: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKEKGKTAFSHSSEKHIQRQ- 59
Query: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS 120
GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRK+SSKDSCQD AGNCPE+ECS
Sbjct: 60 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKMSSKDSCQDTAGNCPEKECS 119
Query: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV 180
L+LNKKSRSST VHNSEIQETCDAHHRGRSRACTG SK+HRS+ALGVQTPS+RKSLVTSV
Sbjct: 120 LSLNKKSRSSTPVHNSEIQETCDAHHRGRSRACTGRSKRHRSRALGVQTPSIRKSLVTSV 179
Query: 181 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 240
RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES
Sbjct: 180 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 239
Query: 241 WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKL 279
WLVPATLPGPGESALDREAHPFPGQEITE VSGSDEAKL
Sbjct: 240 WLVPATLPGPGESALDREAHPFPGQEITETVSGSDEAKL 278
>gi|239747159 PREDICTED: hypothetical protein XP_002343930 [Homo
sapiens]
Length = 278
Score = 536 bits (1381), Expect = e-153
Identities = 265/279 (94%), Positives = 271/279 (97%), Gaps = 1/279 (0%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNED DLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFK KGKTAFSHSSEKH QRQ
Sbjct: 1 MGKGNEDSDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKEKGKTAFSHSSEKHIQRQ- 59
Query: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS 120
GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRK+SSKDSCQD AGNCPE+ECS
Sbjct: 60 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKMSSKDSCQDTAGNCPEKECS 119
Query: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV 180
L+LNKKSRSSTAVHNSEIQETCDAHHRG SRACTG SK+HRS+ALGVQTPS+RKSLVTSV
Sbjct: 120 LSLNKKSRSSTAVHNSEIQETCDAHHRGHSRACTGHSKRHRSRALGVQTPSIRKSLVTSV 179
Query: 181 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 240
RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES
Sbjct: 180 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 239
Query: 241 WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKL 279
WLVPATLPGPGESALDREAHPFPGQEITE VSGSDEAKL
Sbjct: 240 WLVPATLPGPGESALDREAHPFPGQEITETVSGSDEAKL 278
>gi|52353320 FSHD region gene 2 [Homo sapiens]
Length = 278
Score = 536 bits (1381), Expect = e-153
Identities = 265/279 (94%), Positives = 271/279 (97%), Gaps = 1/279 (0%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNED DLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFK KGKTAFSHSSEKH QRQ
Sbjct: 1 MGKGNEDSDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKEKGKTAFSHSSEKHIQRQ- 59
Query: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS 120
GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRK+SSKDSCQD AGNCPE+ECS
Sbjct: 60 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKMSSKDSCQDTAGNCPEKECS 119
Query: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV 180
L+LNKKSRSSTAVHNSEIQETCDAHHRG SRACTG SK+HRS+ALGVQTPS+RKSLVTSV
Sbjct: 120 LSLNKKSRSSTAVHNSEIQETCDAHHRGHSRACTGHSKRHRSRALGVQTPSIRKSLVTSV 179
Query: 181 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 240
RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES
Sbjct: 180 RAMSEAVYQDLAQVWAQQIHSPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAES 239
Query: 241 WLVPATLPGPGESALDREAHPFPGQEITEPVSGSDEAKL 279
WLVPATLPGPGESALDREAHPFPGQEITE VSGSDEAKL
Sbjct: 240 WLVPATLPGPGESALDREAHPFPGQEITETVSGSDEAKL 278
>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
sapiens]
Length = 381
Score = 262 bits (669), Expect = 3e-70
Identities = 139/204 (68%), Positives = 143/204 (70%), Gaps = 52/204 (25%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSH
Sbjct: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSH---------- 50
Query: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECS 120
S + R GNCPEEEC+
Sbjct: 51 ------------------------------------------SSEKHTQRQGNCPEEECN 68
Query: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQTPSLRKSLVTSV 180
LTLNKKSRSSTAVHNSEIQETCDAHHRG SRACTG SK+HRS+AL VQTPSLRKSLVTSV
Sbjct: 69 LTLNKKSRSSTAVHNSEIQETCDAHHRGSSRACTGRSKRHRSRALEVQTPSLRKSLVTSV 128
Query: 181 RAMSEAVYQDLAQVWAQQIHSPLT 204
RAMSEAVYQDLAQVWAQQIHSPLT
Sbjct: 129 RAMSEAVYQDLAQVWAQQIHSPLT 152
>gi|239753769 PREDICTED: similar to FSHD region gene 2 family,
member C [Homo sapiens]
Length = 88
Score = 128 bits (321), Expect = 6e-30
Identities = 60/66 (90%), Positives = 60/66 (90%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNEDP LHCSSIQCSTDQPPFQQISFT KGSDEKKPFKGKGKTA SHSSEKH QRQ
Sbjct: 1 MGKGNEDPYLHCSSIQCSTDQPPFQQISFTGKGSDEKKPFKGKGKTASSHSSEKHIQRQV 60
Query: 61 GSEPNP 66
G EPNP
Sbjct: 61 GLEPNP 66
>gi|239748331 PREDICTED: similar to FSHD region gene 2 family,
member C [Homo sapiens]
Length = 88
Score = 128 bits (321), Expect = 6e-30
Identities = 60/66 (90%), Positives = 60/66 (90%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNEDP LHCSSIQCSTDQPPFQQISFT KGSDEKKPFKGKGKTA SHSSEKH QRQ
Sbjct: 1 MGKGNEDPYLHCSSIQCSTDQPPFQQISFTGKGSDEKKPFKGKGKTASSHSSEKHIQRQV 60
Query: 61 GSEPNP 66
G EPNP
Sbjct: 61 GLEPNP 66
>gi|239742234 PREDICTED: similar to FSHD region gene 2 family,
member C [Homo sapiens]
Length = 88
Score = 128 bits (321), Expect = 6e-30
Identities = 60/66 (90%), Positives = 60/66 (90%)
Query: 1 MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQA 60
MGKGNEDP LHCSSIQCSTDQPPFQQISFT KGSDEKKPFKGKGKTA SHSSEKH QRQ
Sbjct: 1 MGKGNEDPYLHCSSIQCSTDQPPFQQISFTGKGSDEKKPFKGKGKTASSHSSEKHIQRQV 60
Query: 61 GSEPNP 66
G EPNP
Sbjct: 61 GLEPNP 66
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 40.8 bits (94), Expect = 0.001
Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 9/139 (6%)
Query: 31 EKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESS 90
E K K + HSS+K +R SE ++ +E K G S + S
Sbjct: 15 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER 74
Query: 91 SYRENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDA----HH 146
+R R+RK S S + + E KKSRS + I+ + H
Sbjct: 75 RHRSRSRERKKSRSRSRERKKSRSRSRE-----RKKSRSRSRERKRRIRSRSRSRSRHRH 129
Query: 147 RGRSRACTGCSKQHRSQAL 165
R RSR+ T + R + +
Sbjct: 130 RTRSRSRTRSRSRDRKKRI 148
Score = 36.2 bits (82), Expect = 0.033
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 25 QQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAG 84
++++ +E G D K + K SHS + +R+ S K++ ++ + + +
Sbjct: 41 ERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRS 100
Query: 85 SEPESSSYRENCRKRKISSKDSCQDR 110
E + S R RKR+I S+ + R
Sbjct: 101 RERKKSRSRSRERKRRIRSRSRSRSR 126
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 40.8 bits (94), Expect = 0.001
Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 9/139 (6%)
Query: 31 EKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESS 90
E K K + HSS+K +R SE ++ +E K G S + S
Sbjct: 74 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER 133
Query: 91 SYRENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDA----HH 146
+R R+RK S S + + E KKSRS + I+ + H
Sbjct: 134 RHRSRSRERKKSRSRSRERKKSRSRSRE-----RKKSRSRSRERKRRIRSRSRSRSRHRH 188
Query: 147 RGRSRACTGCSKQHRSQAL 165
R RSR+ T + R + +
Sbjct: 189 RTRSRSRTRSRSRDRKKRI 207
Score = 36.2 bits (82), Expect = 0.033
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 25 QQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAG 84
++++ +E G D K + K SHS + +R+ S K++ ++ + + +
Sbjct: 100 ERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRS 159
Query: 85 SEPESSSYRENCRKRKISSKDSCQDR 110
E + S R RKR+I S+ + R
Sbjct: 160 RERKKSRSRSRERKRRIRSRSRSRSR 185
Score = 32.3 bits (72), Expect = 0.48
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 5/129 (3%)
Query: 41 KGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSE-----PESSSYREN 95
+ + K H S+ + ++ SE + +KE+S + + NS+ E E S R
Sbjct: 64 RSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR 123
Query: 96 CRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTG 155
R S + + R+ + KKSRS + + + R RSR+ +
Sbjct: 124 SHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR 183
Query: 156 CSKQHRSQA 164
+HR+++
Sbjct: 184 SRHRHRTRS 192
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 37.4 bits (85), Expect = 0.015
Identities = 46/210 (21%), Positives = 78/210 (37%), Gaps = 35/210 (16%)
Query: 3 KGNEDPDLH-CSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAG 61
+G EDP++ S+ Q +++ EK KK K + K F S KH + ++
Sbjct: 203 EGEEDPEVEFLKSLTTKQKQKLLRKLDRLEK----KKKKKDRKKKKFQKSRSKHKKHKSS 258
Query: 62 SEPNP--------------------NKENSEETKLKAGNSTAGSEPESSSYRENCRKRKI 101
S + NKE + K + N +G S ++ +KRK+
Sbjct: 259 SSSSSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRKL 318
Query: 102 SSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAH-----HRGRSRACTGC 156
+ S +E+ ++ SR + +S+ + H RG R G
Sbjct: 319 HEELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRGSERK-EGS 377
Query: 157 SKQH----RSQALGVQTPSLRKSLVTSVRA 182
S+ H RS+ ++P K T RA
Sbjct: 378 SRSHGREERSRRSRSRSPGSYKQRETRKRA 407
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 35.8 bits (81), Expect = 0.043
Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 6/165 (3%)
Query: 5 NEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEP 64
+ED DL + D+ + S+E+ K K S R +
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSS 218
Query: 65 NPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECSLTLN 124
+P+ S +S++ S SSS RE R R S+ S + G+ + S + +
Sbjct: 219 SPSSSRSRSRSRSRSSSSSQSRSRSSS-RERSRSRGSKSRSSSRSHRGSSSPRKRSYSSS 277
Query: 125 KKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQT 169
S + + + R+R S+ SQ +G T
Sbjct: 278 SSSPERNRKRSRSRSSSSGDRKKRRTR-----SRSPESQVIGENT 317
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 35.0 bits (79), Expect = 0.074
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 17/142 (11%)
Query: 27 ISFTEKGSDEKKPFKGK---GKTAFSHSSEKHTQRQAGSEPNPNKENSEET--------- 74
+S E GS + +P +GK GK + ++ + Q SE + + E S++
Sbjct: 1246 LSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRH 1305
Query: 75 KLKAGNSTAGSE----PESSSYRENCRKRKISSKDS-CQDRAGNCPEEECSLTLNKKSRS 129
KL + +G E P+ + +RK+SS+DS D + EE S + +++
Sbjct: 1306 KLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPR 1365
Query: 130 STAVHNSEIQETCDAHHRGRSR 151
+ + +E++E ++ + + R
Sbjct: 1366 TRSAKKAELEENQRSYKQKKKR 1387
Score = 30.4 bits (67), Expect = 1.8
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 36 EKKPFKGKGKTAFS-HSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESSSYRE 94
E K KG+ + S SE +++G ++ E+ A E SY++
Sbjct: 1324 EHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQ 1383
Query: 95 NCRKRKIS-SKDSCQDRAGNCPEEE 118
++R+I +DS + N EEE
Sbjct: 1384 KKKRRRIKVQEDSSSENKSNSEEEE 1408
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 35.0 bits (79), Expect = 0.074
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 17/142 (11%)
Query: 27 ISFTEKGSDEKKPFKGK---GKTAFSHSSEKHTQRQAGSEPNPNKENSEET--------- 74
+S E GS + +P +GK GK + ++ + Q SE + + E S++
Sbjct: 1284 LSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRH 1343
Query: 75 KLKAGNSTAGSE----PESSSYRENCRKRKISSKDS-CQDRAGNCPEEECSLTLNKKSRS 129
KL + +G E P+ + +RK+SS+DS D + EE S + +++
Sbjct: 1344 KLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPR 1403
Query: 130 STAVHNSEIQETCDAHHRGRSR 151
+ + +E++E ++ + + R
Sbjct: 1404 TRSAKKAELEENQRSYKQKKKR 1425
Score = 30.4 bits (67), Expect = 1.8
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 36 EKKPFKGKGKTAFS-HSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESSSYRE 94
E K KG+ + S SE +++G ++ E+ A E SY++
Sbjct: 1362 EHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQ 1421
Query: 95 NCRKRKIS-SKDSCQDRAGNCPEEE 118
++R+I +DS + N EEE
Sbjct: 1422 KKKRRRIKVQEDSSSENKSNSEEEE 1446
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 35.0 bits (79), Expect = 0.074
Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 2/160 (1%)
Query: 5 NEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEP 64
+ED DL + D+ + S+E+ K K S R +
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSS 218
Query: 65 NPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECSLTLN 124
+P+ S +S++ S SSS RE R R S+ S + G+ + S + +
Sbjct: 219 SPSSSRSRSRSRSRSSSSSQSRSRSSS-RERSRSRGSKSRSSSRSHRGSSSPRKRSYSSS 277
Query: 125 KKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQA 164
S + + + R+R+ ++HRS +
Sbjct: 278 SSSPERNRKRSRSRSSSSGDRKKRRTRS-RSPERRHRSSS 316
>gi|31340735 zinc finger protein 445 [Homo sapiens]
Length = 1031
Score = 35.0 bits (79), Expect = 0.074
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 37 KKPFK----GK---GKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPES 89
++PFK GK G+ S KHT+ P + +S++TKL+ E
Sbjct: 893 ERPFKCQWCGKEFIGRHTLSSHQRKHTRAAQAERSPPARSSSQDTKLRLQKLKPSEEMPL 952
Query: 90 SSYRENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAHHRGR 149
+E C + S QD + +CS+ ++SS + + H R R
Sbjct: 953 EDCKEACSQS--SRLTGLQDISIGKKCHKCSICGKTFNKSSQLISHKRF------HTRER 1004
Query: 150 SRACTGCSKQHR 161
C+ C K R
Sbjct: 1005 PFKCSKCGKTFR 1016
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 35.0 bits (79), Expect = 0.074
Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 44/163 (26%)
Query: 31 EKGSDEKKPFKGKGKTAFSHSSEKHT--------QRQAG----------SEPNPNKENSE 72
E+GS KK G G ++ H KH QR+AG S+P+ E+S+
Sbjct: 762 EEGSSGKKDEGGGGSSSQDHGGRKHKGELPPSSCQRRAGTKRSSRSSHRSQPSSGDEDSD 821
Query: 73 ETKL-----KAGNSTAGSEPESSSYRENCRKRK---------------------ISSKDS 106
+ K+ + + E E S E+ R R SS S
Sbjct: 822 DASSHRLHQKSPSQYSEEEEEEDSGSEHSRSRSRSGRRHSSHRSSRRSYSSSSDASSDQS 881
Query: 107 CQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAHHRGR 149
C R + ++ S ++ R S H+S+ + + HR +
Sbjct: 882 CYSRQRSYSDDSYSDYSDRSRRHSKRSHDSDDSDYASSKHRSK 924
Score = 31.2 bits (69), Expect = 1.1
Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 35/193 (18%)
Query: 31 EKGSDEKKPFKGKGKTAFSHSSEKHTQRQ---AGSEPNPNK-----ENSEETKLKAGNST 82
EK KK + K K++ SE+ + + +GS P + ++S+ L A +
Sbjct: 706 EKSKKRKKRKRKKNKSSAPADSERGPKPEPPGSGSPAPPRRRRRAQDDSQRRSLPAEEGS 765
Query: 83 AGSEPE----SSSYRENCRKRKIS-SKDSCQDRAGNC-----------------PEEECS 120
+G + E SSS RK K SCQ RAG ++ S
Sbjct: 766 SGKKDEGGGGSSSQDHGGRKHKGELPPSSCQRRAGTKRSSRSSHRSQPSSGDEDSDDASS 825
Query: 121 LTLNKKSRSSTAVHNSEIQETCDAHHRGRSRACTGCSKQHRSQALGVQT---PSLRKSLV 177
L++KS S + E +++ H R RSR+ S HRS + S +S
Sbjct: 826 HRLHQKSPSQYSEEEEE-EDSGSEHSRSRSRSGRRHS-SHRSSRRSYSSSSDASSDQSCY 883
Query: 178 TSVRAMSEAVYQD 190
+ R+ S+ Y D
Sbjct: 884 SRQRSYSDDSYSD 896
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 34.7 bits (78), Expect = 0.097
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 2 GKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAG 61
G NED SS Q S + S E K+ K KGK+ S EK ++
Sbjct: 710 GDSNEDSSEDSSSEQDSESG----RESGLENKRTAKRNSKAKGKSD-SEDGEKENEKSKT 764
Query: 62 SEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDR 110
S+ + N E + ++ +S + SE E S E+ R K K + QDR
Sbjct: 765 SDSS----NDESSSIEDSSSDSESESEPESESESRRVTKEKEKKTKQDR 809
Score = 32.0 bits (71), Expect = 0.63
Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
Query: 29 FTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPE 88
F + +E+ + SE Q ++G E + N+++SE++ + +S +G E
Sbjct: 675 FYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQ-DSESGRESG 733
Query: 89 SSSYRENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAHHRG 148
+ R R K K +D E E S T + + S+++ +S ++
Sbjct: 734 LENKRTAKRNSKAKGKSDSEDGE---KENEKSKTSDSSNDESSSIEDSSSDSESESEPES 790
Query: 149 RSRA 152
S +
Sbjct: 791 ESES 794
>gi|153792012 DNA polymerase zeta [Homo sapiens]
Length = 3130
Score = 34.7 bits (78), Expect = 0.097
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 44 GKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISS 103
GK +F+ S H++ + SE N + GNSTA S SS+ ENC S
Sbjct: 703 GKNSFNFSDLNHSKNKVSSEGN-----------EKGNSTALSSLFPSSFTENCELLSCSG 751
Query: 104 KDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSE 137
++ + N +E L K H +E
Sbjct: 752 ENRTMVHSLNSTADESGLNKLKIRYEEFQEHKTE 785
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 34.7 bits (78), Expect = 0.097
Identities = 31/135 (22%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 31 EKGSDEKKPFKGKGKTAFSHSSEKHTQ--------RQAGSEPNPNKENSEETKLKAGNST 82
+K + K K K K+ KH + R G + KE +++ K +
Sbjct: 453 KKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQE 512
Query: 83 AGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQE-- 140
E S E+ SK +DR EC +T K S +S S ++
Sbjct: 513 RSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRS 572
Query: 141 ---TCDAHHRGRSRA 152
H R RSR+
Sbjct: 573 RRVRSRTHDRDRSRS 587
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 34.3 bits (77), Expect = 0.13
Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 8/131 (6%)
Query: 23 PFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEP----NPNKENSEETKLKA 78
P S+ E D + T SHS + + QA SE N ++E+ E + +
Sbjct: 368 PDPTTSYVEDQEDSDSSEEDSSHT-LSHSKSESREEQADSESSESLNFSEESPESPEDEN 426
Query: 79 GNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEI 138
+S G + SSS + DS + E+ S S + N EI
Sbjct: 427 SSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKNIEI 486
Query: 139 QE---TCDAHH 146
+ T DA+H
Sbjct: 487 ESRKLTVDAYH 497
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 34.3 bits (77), Expect = 0.13
Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 8/131 (6%)
Query: 23 PFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEP----NPNKENSEETKLKA 78
P S+ E D + T SHS + + QA SE N ++E+ E + +
Sbjct: 352 PDPTTSYVEDQEDSDSSEEDSSHT-LSHSKSESREEQADSESSESLNFSEESPESPEDEN 410
Query: 79 GNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEI 138
+S G + SSS + DS + E+ S S + N EI
Sbjct: 411 SSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKNIEI 470
Query: 139 QE---TCDAHH 146
+ T DA+H
Sbjct: 471 ESRKLTVDAYH 481
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 34 SDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESSSYR 93
SDEK + K K A SSEK R + + S T+ ++ ++++ S+
Sbjct: 35 SDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSS 94
Query: 94 ENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAHHRGRSRA 152
SS S R+G+ S T S SS++ S + D R RS++
Sbjct: 95 SG------SSSSSASSRSGS------SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKS 141
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 34 SDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESSSYR 93
SDEK + K K A SSEK R + + S T+ ++ ++++ S+
Sbjct: 35 SDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSS 94
Query: 94 ENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAHHRGRSRA 152
SS S R+G+ S T S SS++ S + D R RS++
Sbjct: 95 SG------SSSSSASSRSGS------SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKS 141
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 34 SDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESSSYR 93
SDEK + K K A SSEK R + + S T+ ++ ++++ S+
Sbjct: 35 SDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSS 94
Query: 94 ENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAHHRGRSRA 152
SS S R+G+ S T S SS++ S + D R RS++
Sbjct: 95 SG------SSSSSASSRSGS------SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKS 141
>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 3 [Homo sapiens]
Length = 305
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 34 SDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESSSYR 93
SDEK + K K A SSEK R + + S T+ ++ ++++ S+
Sbjct: 35 SDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSS 94
Query: 94 ENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAHHRGRSRA 152
SS S R+G+ S T S SS++ S + D R RS++
Sbjct: 95 SG------SSSSSASSRSGS------SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKS 141
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 34.3 bits (77), Expect = 0.13
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 15/147 (10%)
Query: 6 EDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKGKGKTAFSHSSEKH-----TQRQA 60
+ P H + + + +++ + G+ KK K KG + ++ K T+RQ
Sbjct: 97 QTPFRHLYTSKTHLKKAEYKKSKDEKGGTPLKKDSKKKGGSYATNPESKQIVEEKTKRQN 156
Query: 61 GSEPNPNKENSEETKLKAGNSTAGSEPESSSYR---ENCRKRKISSKDSCQDRAGNCPEE 117
++ P K + E + K S++ + PES + + +NC S KD +
Sbjct: 157 EADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNC-----SQKDKKDSKNSKKTNT 211
Query: 118 ECSLTLN--KKSRSSTAVHNSEIQETC 142
E T N KK + N I E C
Sbjct: 212 EFLHTKNNPKKDLKRSKTSNDPISEIC 238
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 31 EKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEETKLKAGNSTAGSEPESS 90
+K + EK KGK K H +E + +P +NS AG +P S
Sbjct: 753 QKQASEKVSNKGKRK----HKNEDDNRASESKKPKTEDKNS-----------AGHKP--S 795
Query: 91 SYRENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRSSTAVHNSEIQETCDAHHRGRS 150
S RE+ ++ KD AG P ++ + R+ + + + + G S
Sbjct: 796 SNRESSKQSAAKEKDLLPSPAGPVPSKDPKTEHGSRKRTISQSSSLKSSSNSNKETSGSS 855
Query: 151 RACTGCSKQHRSQ 163
+ + SKQ +++
Sbjct: 856 KNSSSTSKQKKTE 868
Score = 28.1 bits (61), Expect = 9.0
Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 28 SFTEKGSDEKKPFKGKGKTAFSHSSEKHTQRQAGSEPNPNKENSEET----------KLK 77
S + GS+ + +++ S S + A EP P N + K+
Sbjct: 428 SSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNPHKVS 487
Query: 78 AGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECSLTLNKKSRS 129
+S + P S Y++ R++ + +S D +G P+E S T + S++
Sbjct: 488 PASSVDSNIPSSQGYKKEGREQ--GTGNSYTDTSG--PKETSSATPGRDSKT 535
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.123 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,560,002
Number of Sequences: 37866
Number of extensions: 608047
Number of successful extensions: 2313
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 2062
Number of HSP's gapped (non-prelim): 371
length of query: 282
length of database: 18,247,518
effective HSP length: 101
effective length of query: 181
effective length of database: 14,423,052
effective search space: 2610572412
effective search space used: 2610572412
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.