Guide to the Human Genome
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Search of human proteins with 169217521

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169217521 PREDICTED: similar to signal-regulatory protein
beta 1 [Homo sapiens]
         (160 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169217521 PREDICTED: similar to signal-regulatory protein bet...   324   2e-89
gi|239751927 PREDICTED: similar to signal-regulatory protein bet...   257   3e-69
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso...   240   3e-64
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso...   240   4e-64
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi...   226   5e-60
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi...   226   5e-60
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi...   226   5e-60
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso...   222   1e-58
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ...   199   1e-51
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ...   197   4e-51
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ...   197   4e-51
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]          156   8e-39
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ...   156   8e-39
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ...   143   7e-35
gi|30425382 signal-regulatory protein delta [Homo sapiens]            111   3e-25
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa...    89   2e-18
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa...    89   2e-18
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]           46   2e-05
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]           46   2e-05
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]           45   3e-05
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ...    45   3e-05
gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ...    43   1e-04
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]             42   3e-04
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ...    42   3e-04
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]             42   3e-04
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur...    39   0.001
gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2 precu...    39   0.001
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]           38   0.003
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]           38   0.003
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]           38   0.003

>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
           [Homo sapiens]
          Length = 160

 Score =  324 bits (830), Expect = 2e-89
 Identities = 160/160 (100%), Positives = 160/160 (100%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL
Sbjct: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120

Query: 121 GTELSVRGEYSVGLLCPLVCDNNSIITLSILGATARCGGG 160
           GTELSVRGEYSVGLLCPLVCDNNSIITLSILGATARCGGG
Sbjct: 121 GTELSVRGEYSVGLLCPLVCDNNSIITLSILGATARCGGG 160


>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
           [Homo sapiens]
          Length = 136

 Score =  257 bits (657), Expect = 3e-69
 Identities = 127/129 (98%), Positives = 128/129 (99%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL
Sbjct: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120

Query: 121 GTELSVRGE 129
           GTELSVR +
Sbjct: 121 GTELSVRAD 129


>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
           [Homo sapiens]
          Length = 398

 Score =  240 bits (613), Expect = 3e-64
 Identities = 120/123 (97%), Positives = 121/123 (98%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH
Sbjct: 26  GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 85

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
           FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 
Sbjct: 86  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 145

Query: 129 EYS 131
           + S
Sbjct: 146 KPS 148


>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
           [Homo sapiens]
          Length = 181

 Score =  240 bits (612), Expect = 4e-64
 Identities = 122/131 (93%), Positives = 125/131 (95%), Gaps = 1/131 (0%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH
Sbjct: 26  GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 85

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
           FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 
Sbjct: 86  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR- 144

Query: 129 EYSVGLLCPLV 139
           E ++    PL+
Sbjct: 145 EAALAPTAPLL 155


>gi|18426911 signal-regulatory protein alpha precursor [Homo
           sapiens]
          Length = 504

 Score =  226 bits (577), Expect = 5e-60
 Identities = 110/131 (83%), Positives = 119/131 (90%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           + A C++ GVAGE+ELQVIQP+KSV VAAGE+ATLRC  TSLIPVGPI WFRGAG GREL
Sbjct: 19  LAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGREL 78

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 79  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGA 138

Query: 121 GTELSVRGEYS 131
           GTELSVR + S
Sbjct: 139 GTELSVRAKPS 149


>gi|91105767 signal-regulatory protein alpha precursor [Homo
           sapiens]
          Length = 504

 Score =  226 bits (577), Expect = 5e-60
 Identities = 110/131 (83%), Positives = 119/131 (90%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           + A C++ GVAGE+ELQVIQP+KSV VAAGE+ATLRC  TSLIPVGPI WFRGAG GREL
Sbjct: 19  LAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGREL 78

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 79  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGA 138

Query: 121 GTELSVRGEYS 131
           GTELSVR + S
Sbjct: 139 GTELSVRAKPS 149


>gi|91105764 signal-regulatory protein alpha precursor [Homo
           sapiens]
          Length = 504

 Score =  226 bits (577), Expect = 5e-60
 Identities = 110/131 (83%), Positives = 119/131 (90%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           + A C++ GVAGE+ELQVIQP+KSV VAAGE+ATLRC  TSLIPVGPI WFRGAG GREL
Sbjct: 19  LAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGREL 78

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 79  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGA 138

Query: 121 GTELSVRGEYS 131
           GTELSVR + S
Sbjct: 139 GTELSVRAKPS 149


>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
           [Homo sapiens]
          Length = 398

 Score =  222 bits (565), Expect = 1e-58
 Identities = 108/123 (87%), Positives = 115/123 (93%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           GVAGE+ELQVIQP+KS+SVAAGESATL C +TSLIPVGPI WFRGAG GRELIYNQKEGH
Sbjct: 26  GVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGH 85

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
           FPRVTTVS+LTKRNN+DFSI ISNITPADAGTYYCVKFRKGSPD VEFKSGAGTELSVR 
Sbjct: 86  FPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRA 145

Query: 129 EYS 131
           + S
Sbjct: 146 KPS 148


>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
           [Homo sapiens]
          Length = 170

 Score =  199 bits (505), Expect = 1e-51
 Identities = 93/131 (70%), Positives = 111/131 (84%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           +T L     VAGE+ELQ+IQPEK + V  G++ATL C +TSL+PVGP++WFRG G GREL
Sbjct: 17  LTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGREL 76

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYCVKFRKGSP++VEFKSG 
Sbjct: 77  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGP 136

Query: 121 GTELSVRGEYS 131
           GTE+++ G  S
Sbjct: 137 GTEMALGGPAS 147


>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
           [Homo sapiens]
          Length = 276

 Score =  197 bits (500), Expect = 4e-51
 Identities = 91/126 (72%), Positives = 109/126 (86%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           +T L     VAGE+ELQ+IQPEK + V  G++ATL C +TSL+PVGP++WFRG G GREL
Sbjct: 17  LTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGREL 76

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYCVKFRKGSP++VEFKSG 
Sbjct: 77  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGP 136

Query: 121 GTELSV 126
           GTE+++
Sbjct: 137 GTEMAL 142


>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
           [Homo sapiens]
          Length = 387

 Score =  197 bits (500), Expect = 4e-51
 Identities = 91/126 (72%), Positives = 109/126 (86%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           +T L     VAGE+ELQ+IQPEK + V  G++ATL C +TSL+PVGP++WFRG G GREL
Sbjct: 17  LTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGREL 76

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYCVKFRKGSP++VEFKSG 
Sbjct: 77  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGP 136

Query: 121 GTELSV 126
           GTE+++
Sbjct: 137 GTEMAL 142


>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
          Length = 651

 Score =  156 bits (394), Expect = 8e-39
 Identities = 79/119 (66%), Positives = 94/119 (78%), Gaps = 1/119 (0%)

Query: 10  VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 69
           VAGE ELQVIQPE  VSVAAGE ATL C +TSL+PVGPI WFRGA  G++LIY+ K  H 
Sbjct: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568

Query: 70  PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
           PRVTT+S+  KRN+ D+SI IS+IT  DAGTYYC+K R+  P +VE KSG GT++SVRG
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVRG 627



 Score =  113 bits (283), Expect = 6e-26
 Identities = 60/118 (50%), Positives = 74/118 (62%), Gaps = 27/118 (22%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           G AGE+ELQVIQPEK                          WF+G   G+ELIY+ K GH
Sbjct: 417 GAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGGH 450

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
           FP++  +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 451 FPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507


>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
           sapiens]
          Length = 651

 Score =  156 bits (394), Expect = 8e-39
 Identities = 79/119 (66%), Positives = 94/119 (78%), Gaps = 1/119 (0%)

Query: 10  VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 69
           VAGE ELQVIQPE  VSVAAGE ATL C +TSL+PVGPI WFRGA  G++LIY+ K  H 
Sbjct: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568

Query: 70  PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
           PRVTT+S+  KRN+ D+SI IS+IT  DAGTYYC+K R+  P +VE KSG GT++SVRG
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVRG 627



 Score =  113 bits (283), Expect = 6e-26
 Identities = 60/118 (50%), Positives = 74/118 (62%), Gaps = 27/118 (22%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           G AGE+ELQVIQPEK                          WF+G   G+ELIY+ K GH
Sbjct: 417 GAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGGH 450

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
           FP++  +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 451 FPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507


>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
           sapiens]
          Length = 532

 Score =  143 bits (360), Expect = 7e-35
 Identities = 76/142 (53%), Positives = 92/142 (64%), Gaps = 27/142 (19%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           G AGE+EL+VIQPEK                          WF+G   G+ELIY+ K GH
Sbjct: 417 GAAGEEELRVIQPEK--------------------------WFKGTETGQELIYSSKGGH 450

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
           FP++  +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV  
Sbjct: 451 FPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSVHS 509

Query: 129 EYSVGLLCPLVCDNNSIITLSI 150
           EYSVGLL P VCDN SI+T SI
Sbjct: 510 EYSVGLLRPPVCDNKSIVTPSI 531


>gi|30425382 signal-regulatory protein delta [Homo sapiens]
          Length = 197

 Score =  111 bits (277), Expect = 3e-25
 Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 1/109 (0%)

Query: 18  VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSE 77
           V Q E S +V+ GES  L C++   +P GP++WF+G G  R+LIYN K+G+FPRV  + +
Sbjct: 32  VQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGD 91

Query: 78  LTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
            TK  N DFS  I  I+ ADAGTYYCVKF KG     E++SG GT++ V
Sbjct: 92  TTKPGNTDFSTRIREISLADAGTYYCVKFIKGRAIK-EYQSGRGTQVFV 139


>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
           sapiens]
          Length = 244

 Score = 88.6 bits (218), Expect = 2e-18
 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 6/117 (5%)

Query: 13  EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 72
           E +L +IQP++ V    G++  L C +    P GPI WF+GAG  RE IYN      P+ 
Sbjct: 58  EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 117

Query: 73  TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRGE 129
           T V    + +N DFSI + N++  DAGTYYCVKF++    + ++ SG GT L V+ +
Sbjct: 118 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAK 168


>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
           sapiens]
          Length = 342

 Score = 88.6 bits (218), Expect = 2e-18
 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 6/117 (5%)

Query: 13  EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 72
           E +L +IQP++ V    G++  L C +    P GPI WF+GAG  RE IYN      P+ 
Sbjct: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215

Query: 73  TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRGE 129
           T V    + +N DFSI + N++  DAGTYYCVKF++    + ++ SG GT L V+ +
Sbjct: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAK 266



 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           G +  ++ QV+QPE  + VA GE+  LRC +      G I W + +   ++ IYN K G 
Sbjct: 32  GQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGS 91

Query: 69  FPRVTTVSELTKRN-NLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 127
           FP V  + + T    N D+SI I N+T    GTY+CV+F  G  +  E KS  GT + V+
Sbjct: 92  FPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRF-DGLSEHSEMKSDEGTSVLVK 150

Query: 128 G 128
           G
Sbjct: 151 G 151


>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
          Length = 157

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 22/123 (17%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           E+ + Q   ++S++ GE ATL C  +  +    + W           Y QK G  PR+  
Sbjct: 26  EIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSW-----------YQQKPGQAPRLLI 74

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTE 123
               T+   +           DF+++IS++ P D   YYC +     P  ++ ++   T 
Sbjct: 75  YGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQHETKTSTR 134

Query: 124 LSV 126
            SV
Sbjct: 135 PSV 137


>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
          Length = 151

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 22/123 (17%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           E+ + Q   ++S++ GE ATL C  +  +    + W           Y QK G  PR+  
Sbjct: 21  EIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSW-----------YQQKPGQAPRLLI 69

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTE 123
               T+   +           DF+++IS++ P D   YYC +     P  ++ ++   T 
Sbjct: 70  YGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQHETKTSTR 129

Query: 124 LSV 126
            SV
Sbjct: 130 PSV 132


>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
          Length = 152

 Score = 44.7 bits (104), Expect = 3e-05
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           E+ + Q   ++S++ GE ATL C  +  +    + W           Y QK G  PR+  
Sbjct: 21  EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAW-----------YQQKPGLAPRLLI 69

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSPD--DVEFKSGAG 121
               ++   +           DF+++IS + P D   YYC ++    P    +E K+ A 
Sbjct: 70  YDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTVIQLETKTSAR 129

Query: 122 TELSVR 127
             L  R
Sbjct: 130 PSLFTR 135


>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
           sapiens]
          Length = 152

 Score = 44.7 bits (104), Expect = 3e-05
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           E+ + Q   ++S++ GE ATL C  +  +    + W           Y QK G  PR+  
Sbjct: 21  EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAW-----------YQQKPGLAPRLLI 69

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSPD--DVEFKSGAG 121
               ++   +           DF+++IS + P D   YYC ++    P    +E K+ A 
Sbjct: 70  YDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTVIQLETKTSAR 129

Query: 122 TELSVR 127
             L  R
Sbjct: 130 PSLFTR 135


>gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo
           sapiens]
          Length = 162

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 9/92 (9%)

Query: 16  LQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWF--RGAGAGRELIY--NQKEGHFPR 71
           +Q+ QP  S+S + G+S T+ C  +       + W+  +   A + LIY  +  +   P 
Sbjct: 74  IQMTQPPSSLSASVGDSVTITCRASQSF-TNQLAWYQQKPGKAPKLLIYRVSSLQTGVPS 132

Query: 72  VTTVSELTKRNNLDFSISISNITPADAGTYYC 103
           + + SE    +  DF+++IS++ P D  TYYC
Sbjct: 133 LFSGSE----SGTDFTLTISSLQPDDVATYYC 160


>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
          Length = 191

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 23/102 (22%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++QV Q   S+S + G+  T+ C  +  I  G + W           Y QK G  P +  
Sbjct: 23  DIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSW-----------YQQKPGQAPTLLI 70

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVK 105
            +  + ++ +           DF+++IS++ P D  TYYC++
Sbjct: 71  YAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCLQ 112


>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
           sapiens]
          Length = 155

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 23/102 (22%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++QV Q   S+S + G+  T+ C  +  I  G + W           Y QK G  P +  
Sbjct: 23  DIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSW-----------YQQKPGQAPTLLI 70

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVK 105
            +  + ++ +           DF+++IS++ P D  TYYC++
Sbjct: 71  YAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCLQ 112


>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
          Length = 191

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 23/102 (22%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++QV Q   S+S + G+  T+ C  +  I  G + W           Y QK G  P +  
Sbjct: 23  DIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSW-----------YQQKPGQAPTLLI 70

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVK 105
            +  + ++ +           DF+++IS++ P D  TYYC++
Sbjct: 71  YAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCLQ 112


>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
           [Homo sapiens]
          Length = 527

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 19/133 (14%)

Query: 18  VIQPEKSVSVAAGESATLRCAMT--SLIPVGPIMWFRGA--------GAGRELIYNQKEG 67
           V+ P   +    GE+ TLRC ++         + WFR            GRE    Q E 
Sbjct: 32  VVGPTDPILATVGENTTLRCHLSPEKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEE 91

Query: 68  HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEF----KSGAGTE 123
           +  R T VS+   R ++  ++ I NIT  + GTY C  F++G   D        +G G++
Sbjct: 92  YRGRTTFVSKDISRGSV--ALVIHNITAQENGTYRCY-FQEGRSYDEAILHLVVAGLGSK 148

Query: 124 --LSVRGEYSVGL 134
             +S+RG    G+
Sbjct: 149 PLISMRGHEDGGI 161


>gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2
           precursor [Homo sapiens]
          Length = 334

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 19/133 (14%)

Query: 18  VIQPEKSVSVAAGESATLRCAMT--SLIPVGPIMWFRGA--------GAGRELIYNQKEG 67
           V+ P   +    GE+ TLRC ++         + WFR            GRE    Q E 
Sbjct: 32  VVGPTDPILATVGENTTLRCHLSPEKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEE 91

Query: 68  HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEF----KSGAGTE 123
           +  R T VS+   R ++  ++ I NIT  + GTY C  F++G   D        +G G++
Sbjct: 92  YRGRTTFVSKDISRGSV--ALVIHNITAQENGTYRCY-FQEGRSYDEAILHLVVAGLGSK 148

Query: 124 --LSVRGEYSVGL 134
             +S+RG    G+
Sbjct: 149 PLISMRGHEDGGI 161


>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 296

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 23/108 (21%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++Q+ Q   S+S + G+  T+ C  +  I    + W           Y QK G  P++  
Sbjct: 194 DIQMTQSPSSLSASVGDRVTITCRASQGIS-NNLNW-----------YQQKPGKTPKLLI 241

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSP 111
            +  + ++ +           D++++IS++ P D  TYYC +    SP
Sbjct: 242 YAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATYYCQQSDSTSP 289


>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 242

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 23/108 (21%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++Q+ Q   S+S + G+  T+ C  +  I    + W           Y QK G  P++  
Sbjct: 140 DIQMTQSPSSLSASVGDRVTITCRASQGIS-NNLNW-----------YQQKPGKTPKLLI 187

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSP 111
            +  + ++ +           D++++IS++ P D  TYYC +    SP
Sbjct: 188 YAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATYYCQQSDSTSP 235


>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 242

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 23/108 (21%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++Q+ Q   S+S + G+  T+ C  +  I    + W           Y QK G  P++  
Sbjct: 140 DIQMTQSPSSLSASVGDRVTITCRASQGIS-NNLNW-----------YQQKPGKTPKLLI 187

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSP 111
            +  + ++ +           D++++IS++ P D  TYYC +    SP
Sbjct: 188 YAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATYYCQQSDSTSP 235


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,225,126
Number of Sequences: 37866
Number of extensions: 255387
Number of successful extensions: 1329
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 1033
Number of HSP's gapped (non-prelim): 393
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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