Guide to the Human Genome
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Search of human proteins with 169217213

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169217213 PREDICTED: similar to hCG1820375 [Homo sapiens]
         (111 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169217213 PREDICTED: similar to hCG1820375 [Homo sapiens]          221   1e-58
gi|169216400 PREDICTED: similar to hCG1820375 [Homo sapiens]          221   1e-58
gi|169216858 PREDICTED: hypothetical protein LOC653155 [Homo sap...   221   1e-58
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]      217   1e-57
gi|4506081 mitogen-activated protein kinase 10 isoform 1 [Homo s...    44   2e-05
gi|20986510 mitogen-activated protein kinase 10 isoform 2 [Homo ...    44   2e-05
gi|20986508 mitogen-activated protein kinase 10 isoform 4 [Homo ...    44   2e-05
gi|20986506 mitogen-activated protein kinase 10 isoform 3 [Homo ...    44   2e-05
gi|20986523 mitogen-activated protein kinase 8 isoform JNK1 alph...    41   2e-04
gi|20986521 mitogen-activated protein kinase 8 isoform JNK1 beta...    41   2e-04
gi|20986519 mitogen-activated protein kinase 8 isoform JNK1 beta...    41   2e-04
gi|4506095 mitogen-activated protein kinase 8 isoform JNK1 alpha...    41   2e-04
gi|21237745 mitogen-activated protein kinase 9 isoform JNK2 beta...    40   3e-04
gi|21237742 mitogen-activated protein kinase 9 isoform JNK2 beta...    40   3e-04
gi|21237739 mitogen-activated protein kinase 9 isoform JNK2 alph...    40   3e-04
gi|21237736 mitogen-activated protein kinase 9 isoform JNK2 alph...    40   3e-04
gi|47717134 CDC-like kinase 2 [Homo sapiens]                           38   0.002
gi|186700629 calcium/calmodulin-dependent serine protein kinase ...    38   0.002
gi|186700627 calcium/calmodulin-dependent serine protein kinase ...    38   0.002
gi|186972120 calcium/calmodulin-dependent serine protein kinase ...    38   0.002
gi|26667199 calcium/calmodulin-dependent protein kinase II gamma...    35   0.017
gi|26667191 calcium/calmodulin-dependent protein kinase II gamma...    35   0.017
gi|26667211 calcium/calmodulin-dependent protein kinase II gamma...    35   0.017
gi|26667203 calcium/calmodulin-dependent protein kinase II gamma...    35   0.017
gi|26667196 calcium/calmodulin-dependent protein kinase II gamma...    35   0.017
gi|212549756 calcium/calmodulin-dependent protein kinase II delt...    34   0.022
gi|26667183 calcium/calmodulin-dependent protein kinase II delta...    34   0.022
gi|212549753 calcium/calmodulin-dependent protein kinase II delt...    34   0.022
gi|26667186 calcium/calmodulin-dependent protein kinase II delta...    34   0.022
gi|26667189 calcium/calmodulin-dependent protein kinase II delta...    34   0.022

>gi|169217213 PREDICTED: similar to hCG1820375 [Homo sapiens]
          Length = 111

 Score =  221 bits (563), Expect = 1e-58
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL 60
           MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL
Sbjct: 1   MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL 60

Query: 61  ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 111
           ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI
Sbjct: 61  ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 111


>gi|169216400 PREDICTED: similar to hCG1820375 [Homo sapiens]
          Length = 111

 Score =  221 bits (563), Expect = 1e-58
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL 60
           MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL
Sbjct: 1   MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL 60

Query: 61  ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 111
           ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI
Sbjct: 61  ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 111


>gi|169216858 PREDICTED: hypothetical protein LOC653155 [Homo
           sapiens]
          Length = 111

 Score =  221 bits (563), Expect = 1e-58
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL 60
           MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL
Sbjct: 1   MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL 60

Query: 61  ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 111
           ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI
Sbjct: 61  ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 111


>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
          Length = 1007

 Score =  217 bits (553), Expect = 1e-57
 Identities = 108/111 (97%), Positives = 110/111 (99%)

Query: 1    MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFRYIEIDKVTEREKVTVISTINPTKDLL 60
            MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNF YIE+DKVTEREKVTV+STINPTKDLL
Sbjct: 897  MLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLL 956

Query: 61   ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 111
            ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI
Sbjct: 957  ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 1007


>gi|4506081 mitogen-activated protein kinase 10 isoform 1 [Homo
           sapiens]
          Length = 422

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++DPAKRIS++ ALQH +I
Sbjct: 323 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359


>gi|20986510 mitogen-activated protein kinase 10 isoform 2 [Homo
           sapiens]
          Length = 464

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++DPAKRIS++ ALQH +I
Sbjct: 323 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359


>gi|20986508 mitogen-activated protein kinase 10 isoform 4 [Homo
           sapiens]
          Length = 277

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++DPAKRIS++ ALQH +I
Sbjct: 178 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 214


>gi|20986506 mitogen-activated protein kinase 10 isoform 3 [Homo
           sapiens]
          Length = 426

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++DPAKRIS++ ALQH +I
Sbjct: 285 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321


>gi|20986523 mitogen-activated protein kinase 8 isoform JNK1 alpha2
           [Homo sapiens]
          Length = 427

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++D +KRIS+++ALQH +I
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321


>gi|20986521 mitogen-activated protein kinase 8 isoform JNK1 beta2
           [Homo sapiens]
          Length = 427

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++D +KRIS+++ALQH +I
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321


>gi|20986519 mitogen-activated protein kinase 8 isoform JNK1 beta1
           [Homo sapiens]
          Length = 384

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++D +KRIS+++ALQH +I
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321


>gi|4506095 mitogen-activated protein kinase 8 isoform JNK1 alpha1
           [Homo sapiens]
          Length = 384

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++D +KRIS+++ALQH +I
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321


>gi|21237745 mitogen-activated protein kinase 9 isoform JNK2 beta2
           [Homo sapiens]
          Length = 424

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++DP KRIS+++AL+H +I
Sbjct: 285 ERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321


>gi|21237742 mitogen-activated protein kinase 9 isoform JNK2 beta1
           [Homo sapiens]
          Length = 382

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++DP KRIS+++AL+H +I
Sbjct: 285 ERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321


>gi|21237739 mitogen-activated protein kinase 9 isoform JNK2 alpha1
           [Homo sapiens]
          Length = 382

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++DP KRIS+++AL+H +I
Sbjct: 285 ERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321


>gi|21237736 mitogen-activated protein kinase 9 isoform JNK2 alpha2
           [Homo sapiens]
          Length = 424

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 17/37 (45%), Positives = 28/37 (75%)

Query: 71  EDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFI 107
           E  + K  Q +DLL ++L++DP KRIS+++AL+H +I
Sbjct: 285 ERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321


>gi|47717134 CDC-like kinase 2 [Homo sapiens]
          Length = 498

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 16/40 (40%), Positives = 28/40 (70%)

Query: 67  QRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAF 106
           +R    + ++ HQL DL++ +L  +PAKR+++ +ALQH F
Sbjct: 438 RRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPF 477


>gi|186700629 calcium/calmodulin-dependent serine protein kinase
           isoform 3 [Homo sapiens]
          Length = 897

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 15/30 (50%), Positives = 26/30 (86%)

Query: 81  KDLLDQILMLDPAKRISINQALQHAFIQEK 110
           KDL+ ++LMLDPA+RI++ +AL H +++E+
Sbjct: 250 KDLVRRMLMLDPAERITVYEALNHPWLKER 279


>gi|186700627 calcium/calmodulin-dependent serine protein kinase
           isoform 2 [Homo sapiens]
          Length = 898

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 15/30 (50%), Positives = 26/30 (86%)

Query: 81  KDLLDQILMLDPAKRISINQALQHAFIQEK 110
           KDL+ ++LMLDPA+RI++ +AL H +++E+
Sbjct: 250 KDLVRRMLMLDPAERITVYEALNHPWLKER 279


>gi|186972120 calcium/calmodulin-dependent serine protein kinase
           isoform 1 [Homo sapiens]
          Length = 921

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 15/30 (50%), Positives = 26/30 (86%)

Query: 81  KDLLDQILMLDPAKRISINQALQHAFIQEK 110
           KDL+ ++LMLDPA+RI++ +AL H +++E+
Sbjct: 250 KDLVRRMLMLDPAERITVYEALNHPWLKER 279


>gi|26667199 calcium/calmodulin-dependent protein kinase II gamma
           isoform 3 [Homo sapiens]
          Length = 518

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + K+L++Q+L ++PAKRI+ +QAL+H ++ ++
Sbjct: 244 EAKNLINQMLTINPAKRITADQALKHPWVCQR 275


>gi|26667191 calcium/calmodulin-dependent protein kinase II gamma
           isoform 4 [Homo sapiens]
          Length = 495

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + K+L++Q+L ++PAKRI+ +QAL+H ++ ++
Sbjct: 244 EAKNLINQMLTINPAKRITADQALKHPWVCQR 275


>gi|26667211 calcium/calmodulin-dependent protein kinase II gamma
           isoform 6 [Homo sapiens]
          Length = 504

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + K+L++Q+L ++PAKRI+ +QAL+H ++ ++
Sbjct: 244 EAKNLINQMLTINPAKRITADQALKHPWVCQR 275


>gi|26667203 calcium/calmodulin-dependent protein kinase II gamma
           isoform 1 [Homo sapiens]
          Length = 556

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + K+L++Q+L ++PAKRI+ +QAL+H ++ ++
Sbjct: 244 EAKNLINQMLTINPAKRITADQALKHPWVCQR 275


>gi|26667196 calcium/calmodulin-dependent protein kinase II gamma
           isoform 2 [Homo sapiens]
          Length = 527

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + K+L++Q+L ++PAKRI+ +QAL+H ++ ++
Sbjct: 244 EAKNLINQMLTINPAKRITADQALKHPWVCQR 275


>gi|212549756 calcium/calmodulin-dependent protein kinase II delta
           isoform 4 [Homo sapiens]
          Length = 489

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + KDL++++L ++PAKRI+ ++AL+H +I ++
Sbjct: 244 EAKDLINKMLTINPAKRITASEALKHPWICQR 275


>gi|26667183 calcium/calmodulin-dependent protein kinase II delta
           isoform 1 [Homo sapiens]
          Length = 478

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + KDL++++L ++PAKRI+ ++AL+H +I ++
Sbjct: 244 EAKDLINKMLTINPAKRITASEALKHPWICQR 275


>gi|212549753 calcium/calmodulin-dependent protein kinase II delta
           isoform 5 [Homo sapiens]
          Length = 492

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + KDL++++L ++PAKRI+ ++AL+H +I ++
Sbjct: 244 EAKDLINKMLTINPAKRITASEALKHPWICQR 275


>gi|26667186 calcium/calmodulin-dependent protein kinase II delta
           isoform 1 [Homo sapiens]
          Length = 478

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + KDL++++L ++PAKRI+ ++AL+H +I ++
Sbjct: 244 EAKDLINKMLTINPAKRITASEALKHPWICQR 275


>gi|26667189 calcium/calmodulin-dependent protein kinase II delta
           isoform 2 [Homo sapiens]
          Length = 478

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 13/32 (40%), Positives = 27/32 (84%)

Query: 79  QLKDLLDQILMLDPAKRISINQALQHAFIQEK 110
           + KDL++++L ++PAKRI+ ++AL+H +I ++
Sbjct: 244 EAKDLINKMLTINPAKRITASEALKHPWICQR 275


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.139    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,580,178
Number of Sequences: 37866
Number of extensions: 134276
Number of successful extensions: 678
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 489
Number of HSP's gapped (non-prelim): 213
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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