Guide to the Human Genome
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Name: MAPK9 Sequence: fasta or formatted (424aa) NCBI GI: 21237736
Description:

mitogen-activated protein kinase 9 isoform JNK2 alpha2

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [242aa] mitogen-activated protein kinase 9 isoform JNK2 gamma
alt prot [382aa] mitogen-activated protein kinase 9 isoform JNK2 alpha1
alt prot [382aa] mitogen-activated protein kinase 9 isoform JNK2 beta1
alt prot [424aa] mitogen-activated protein kinase 9 isoform JNK2 beta2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         25           2
 C cysteine            2.4         10           1
 D aspartate           6.6         28           1
 E glutamate           7.1         30           2
 F phenylalanine       3.1         13           1
 G glycine             4.2         18           1
 H histidine           2.4         10           1
 I isoleucine          6.6         28           2
 K lysine              6.6         28           2
 L leucine             8.5         36           2
 M methionine          3.3         14           2
 N asparagine          3.5         15           1
 P proline             5.0         21           3
 Q glutamine           5.0         21           2
 R arginine            4.2         18           1
 S serine              8.0         34           3
 T threonine           5.0         21           1
 V valine              7.5         32           2
 W tryptophan          1.4          6           1
 Y tyrosine            3.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 9 isoform JNK2 alph... 
MAPK9                 0.975   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.894   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.869   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK10                0.835   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.835   mitogen-activated protein kinase 10 isoform 3 
MAPK8                 0.826   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.812   mitogen-activated protein kinase 8 isoform JNK1 alph...
MAPK10                0.771   mitogen-activated protein kinase 10 isoform 1 
MAPK8                 0.765   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.752   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK10                0.547   mitogen-activated protein kinase 10 isoform 4 
MAPK9                 0.530   mitogen-activated protein kinase 9 isoform JNK2 gam...
MAPK14                0.372   mitogen-activated protein kinase 14 isoform 2 
MAPK14                0.360   mitogen-activated protein kinase 14 isoform 1 
MAPK13                0.356   mitogen-activated protein kinase 13 
MAPK11                0.355   mitogen-activated protein kinase 11 
MAPK12                0.349   mitogen-activated protein kinase 12 
MAPK14                0.314   mitogen-activated protein kinase 14 isoform 3 
MAPK14                0.302   mitogen-activated protein kinase 14 isoform 4 
MAPK1                 0.277   mitogen-activated protein kinase 1 
MAPK1                 0.277   mitogen-activated protein kinase 1 
MAPK3                 0.275   mitogen-activated protein kinase 3 isoform 1 
MAPK3                 0.267   mitogen-activated protein kinase 3 isoform 2 
MAPK7                 0.266   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.266   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.266   mitogen-activated protein kinase 7 isoform 1 
MAPK3                 0.228   mitogen-activated protein kinase 3 isoform 3 
NLK                   0.221   nemo like kinase 
MAPK15                0.210   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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