Guide to the Human Genome
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Name: MAPK8 Sequence: fasta or formatted (427aa) NCBI GI: 20986523
Description:

mitogen-activated protein kinase 8 isoform JNK1 alpha2

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [384aa] mitogen-activated protein kinase 8 isoform JNK1 beta1
alt prot [427aa] mitogen-activated protein kinase 8 isoform JNK1 beta2
alt prot [384aa] mitogen-activated protein kinase 8 isoform JNK1 alpha1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         26           3
 C cysteine            2.3         10           2
 D aspartate           5.9         25           1
 E glutamate           6.6         28           2
 F phenylalanine       2.8         12           1
 G glycine             5.2         22           1
 H histidine           2.6         11           1
 I isoleucine          6.3         27           2
 K lysine              6.8         29           2
 L leucine             9.1         39           2
 M methionine          3.7         16           2
 N asparagine          4.2         18           2
 P proline             5.6         24           3
 Q glutamine           4.0         17           1
 R arginine            4.9         21           1
 S serine              7.7         33           5
 T threonine           4.0         17           1
 V valine              7.0         30           2
 W tryptophan          0.9          4           1
 Y tyrosine            4.2         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 8 isoform JNK1 alph... 
MAPK8                 0.980   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK10                0.910   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.910   mitogen-activated protein kinase 10 isoform 3 
MAPK8                 0.889   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK8                 0.869   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK10                0.830   mitogen-activated protein kinase 10 isoform 1 
MAPK9                 0.823   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.805   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.761   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.744   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK10                0.595   mitogen-activated protein kinase 10 isoform 4 
MAPK9                 0.455   mitogen-activated protein kinase 9 isoform JNK2 gam...
MAPK11                0.365   mitogen-activated protein kinase 11 
MAPK13                0.352   mitogen-activated protein kinase 13 
MAPK14                0.346   mitogen-activated protein kinase 14 isoform 2 
MAPK14                0.337   mitogen-activated protein kinase 14 isoform 1 
MAPK12                0.335   mitogen-activated protein kinase 12 
MAPK14                0.295   mitogen-activated protein kinase 14 isoform 3 
MAPK14                0.290   mitogen-activated protein kinase 14 isoform 4 
MAPK1                 0.278   mitogen-activated protein kinase 1 
MAPK1                 0.278   mitogen-activated protein kinase 1 
MAPK3                 0.276   mitogen-activated protein kinase 3 isoform 1 
MAPK3                 0.271   mitogen-activated protein kinase 3 isoform 2 
MAPK7                 0.266   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.266   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.266   mitogen-activated protein kinase 7 isoform 1 
MAPK3                 0.216   mitogen-activated protein kinase 3 isoform 3 
NLK                   0.213   nemo like kinase 
MAPK15                0.203   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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