Guide to the Human Genome
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Name: MAPK9 Sequence: fasta or formatted (424aa) NCBI GI: 21237745
Description:

mitogen-activated protein kinase 9 isoform JNK2 beta2

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [242aa] mitogen-activated protein kinase 9 isoform JNK2 gamma
alt prot [424aa] mitogen-activated protein kinase 9 isoform JNK2 alpha2
alt prot [382aa] mitogen-activated protein kinase 9 isoform JNK2 alpha1
alt prot [382aa] mitogen-activated protein kinase 9 isoform JNK2 beta1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         26           2
 C cysteine            2.1          9           1
 D aspartate           6.6         28           1
 E glutamate           7.1         30           2
 F phenylalanine       3.1         13           1
 G glycine             3.8         16           1
 H histidine           2.4         10           1
 I isoleucine          6.4         27           2
 K lysine              6.6         28           2
 L leucine             8.7         37           2
 M methionine          3.5         15           2
 N asparagine          3.5         15           1
 P proline             5.2         22           3
 Q glutamine           4.7         20           2
 R arginine            4.5         19           1
 S serine              8.0         34           3
 T threonine           4.7         20           1
 V valine              7.5         32           2
 W tryptophan          1.4          6           1
 Y tyrosine            4.0         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 9 isoform JNK2 beta... 
MAPK9                 0.976   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.894   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.870   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK10                0.850   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.850   mitogen-activated protein kinase 10 isoform 3 
MAPK8                 0.831   mitogen-activated protein kinase 8 isoform JNK1 alph...
MAPK8                 0.819   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK10                0.788   mitogen-activated protein kinase 10 isoform 1 
MAPK8                 0.770   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK8                 0.758   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK10                0.562   mitogen-activated protein kinase 10 isoform 4 
MAPK9                 0.507   mitogen-activated protein kinase 9 isoform JNK2 gam...
MAPK14                0.370   mitogen-activated protein kinase 14 isoform 2 
MAPK13                0.363   mitogen-activated protein kinase 13 
MAPK11                0.361   mitogen-activated protein kinase 11 
MAPK14                0.359   mitogen-activated protein kinase 14 isoform 1 
MAPK12                0.348   mitogen-activated protein kinase 12 
MAPK14                0.313   mitogen-activated protein kinase 14 isoform 3 
MAPK14                0.301   mitogen-activated protein kinase 14 isoform 4 
MAPK1                 0.289   mitogen-activated protein kinase 1 
MAPK1                 0.289   mitogen-activated protein kinase 1 
MAPK3                 0.286   mitogen-activated protein kinase 3 isoform 1 
MAPK3                 0.280   mitogen-activated protein kinase 3 isoform 2 
MAPK7                 0.276   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.276   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.276   mitogen-activated protein kinase 7 isoform 1 
MAPK3                 0.232   mitogen-activated protein kinase 3 isoform 3 
NLK                   0.223   nemo like kinase 
MAPK15                0.208   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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