Guide to the Human Genome
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Name: MAPK9 Sequence: fasta or formatted (382aa) NCBI GI: 21237742
Description:

mitogen-activated protein kinase 9 isoform JNK2 beta1

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [242aa] mitogen-activated protein kinase 9 isoform JNK2 gamma
alt prot [424aa] mitogen-activated protein kinase 9 isoform JNK2 alpha2
alt prot [382aa] mitogen-activated protein kinase 9 isoform JNK2 alpha1
alt prot [424aa] mitogen-activated protein kinase 9 isoform JNK2 beta2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         22           2
 C cysteine            2.1          8           1
 D aspartate           6.0         23           1
 E glutamate           7.3         28           2
 F phenylalanine       3.4         13           1
 G glycine             3.7         14           1
 H histidine           2.6         10           1
 I isoleucine          6.5         25           2
 K lysine              7.3         28           2
 L leucine             8.9         34           2
 M methionine          3.9         15           2
 N asparagine          3.4         13           1
 P proline             5.2         20           3
 Q glutamine           5.5         21           2
 R arginine            4.7         18           1
 S serine              5.5         21           1
 T threonine           3.9         15           1
 V valine              8.1         31           2
 W tryptophan          1.6          6           1
 Y tyrosine            4.5         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 9 isoform JNK2 beta... 
MAPK9                 0.988   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.973   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.962   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK10                0.871   mitogen-activated protein kinase 10 isoform 1 
MAPK10                0.867   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.867   mitogen-activated protein kinase 10 isoform 3 
MAPK8                 0.853   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK8                 0.849   mitogen-activated protein kinase 8 isoform JNK1 alph...
MAPK8                 0.840   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.836   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK10                0.622   mitogen-activated protein kinase 10 isoform 4 
MAPK9                 0.560   mitogen-activated protein kinase 9 isoform JNK2 gam...
MAPK14                0.408   mitogen-activated protein kinase 14 isoform 2 
MAPK13                0.401   mitogen-activated protein kinase 13 
MAPK11                0.399   mitogen-activated protein kinase 11 
MAPK14                0.397   mitogen-activated protein kinase 14 isoform 1 
MAPK12                0.385   mitogen-activated protein kinase 12 
MAPK14                0.346   mitogen-activated protein kinase 14 isoform 3 
MAPK14                0.333   mitogen-activated protein kinase 14 isoform 4 
MAPK1                 0.320   mitogen-activated protein kinase 1 
MAPK1                 0.320   mitogen-activated protein kinase 1 
MAPK3                 0.316   mitogen-activated protein kinase 3 isoform 1 
MAPK3                 0.309   mitogen-activated protein kinase 3 isoform 2 
MAPK7                 0.306   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.306   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.306   mitogen-activated protein kinase 7 isoform 1 
MAPK3                 0.256   mitogen-activated protein kinase 3 isoform 3 
NLK                   0.247   nemo like kinase 
MAPK15                0.229   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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