Guide to the Human Genome
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Name: MAPK9 Sequence: fasta or formatted (382aa) NCBI GI: 21237739
Description:

mitogen-activated protein kinase 9 isoform JNK2 alpha1

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [242aa] mitogen-activated protein kinase 9 isoform JNK2 gamma
alt prot [424aa] mitogen-activated protein kinase 9 isoform JNK2 alpha2
alt prot [382aa] mitogen-activated protein kinase 9 isoform JNK2 beta1
alt prot [424aa] mitogen-activated protein kinase 9 isoform JNK2 beta2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         21           2
 C cysteine            2.4          9           1
 D aspartate           6.0         23           1
 E glutamate           7.3         28           2
 F phenylalanine       3.4         13           1
 G glycine             4.2         16           1
 H histidine           2.6         10           1
 I isoleucine          6.8         26           2
 K lysine              7.3         28           2
 L leucine             8.6         33           2
 M methionine          3.7         14           2
 N asparagine          3.4         13           1
 P proline             5.0         19           3
 Q glutamine           5.8         22           2
 R arginine            4.5         17           1
 S serine              5.5         21           1
 T threonine           4.2         16           1
 V valine              8.1         31           2
 W tryptophan          1.6          6           1
 Y tyrosine            4.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 9 isoform JNK2 alph... 
MAPK9                 0.988   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.972   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.960   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK10                0.853   mitogen-activated protein kinase 10 isoform 1 
MAPK10                0.850   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.850   mitogen-activated protein kinase 10 isoform 3 
MAPK8                 0.848   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.844   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.833   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK8                 0.829   mitogen-activated protein kinase 8 isoform JNK1 alph...
MAPK10                0.605   mitogen-activated protein kinase 10 isoform 4 
MAPK9                 0.585   mitogen-activated protein kinase 9 isoform JNK2 gam...
MAPK14                0.411   mitogen-activated protein kinase 14 isoform 2 
MAPK14                0.397   mitogen-activated protein kinase 14 isoform 1 
MAPK13                0.393   mitogen-activated protein kinase 13 
MAPK11                0.392   mitogen-activated protein kinase 11 
MAPK12                0.385   mitogen-activated protein kinase 12 
MAPK14                0.347   mitogen-activated protein kinase 14 isoform 3 
MAPK14                0.334   mitogen-activated protein kinase 14 isoform 4 
MAPK1                 0.306   mitogen-activated protein kinase 1 
MAPK1                 0.306   mitogen-activated protein kinase 1 
MAPK3                 0.303   mitogen-activated protein kinase 3 isoform 1 
MAPK3                 0.295   mitogen-activated protein kinase 3 isoform 2 
MAPK7                 0.294   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.294   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.294   mitogen-activated protein kinase 7 isoform 1 
MAPK3                 0.252   mitogen-activated protein kinase 3 isoform 3 
NLK                   0.244   nemo like kinase 
MAPK15                0.232   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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