BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169217153 PREDICTED: similar to EEF1A1 protein [Homo sapiens] (105 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169217153 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 221 1e-58 gi|113430525 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 221 1e-58 gi|113429979 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 221 1e-58 gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H... 125 7e-30 gi|239757543 PREDICTED: similar to eukaryotic translation elonga... 124 2e-29 gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H... 124 2e-29 gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 67 2e-12 gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 67 2e-12 gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] 58 1e-09 gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 58 1e-09 gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 58 1e-09 gi|46094014 peptide chain release factor 3 [Homo sapiens] 57 3e-09 gi|34147630 Tu translation elongation factor, mitochondrial prec... 30 0.41 gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 28 1.2 gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 28 1.5 gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 28 1.5 gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 28 1.5 gi|7262393 ATP-binding cassette, sub-family D (ALD), member 1 [H... 27 3.4 gi|92091572 dedicator of cytokinesis 4 [Homo sapiens] 27 3.4 gi|24119166 retinoblastoma binding protein 9 [Homo sapiens] 26 5.9 gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo sa... 26 7.7 >gi|169217153 PREDICTED: similar to EEF1A1 protein [Homo sapiens] Length = 105 Score = 221 bits (563), Expect = 1e-58 Identities = 105/105 (100%), Positives = 105/105 (100%) Query: 1 MGKEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAE 60 MGKEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAE Sbjct: 1 MGKEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAE 60 Query: 61 CECGVTIDISPWKFETSKQWTRLLLELTRSPNIPRKLRSLNAYYL 105 CECGVTIDISPWKFETSKQWTRLLLELTRSPNIPRKLRSLNAYYL Sbjct: 61 CECGVTIDISPWKFETSKQWTRLLLELTRSPNIPRKLRSLNAYYL 105 >gi|113430525 PREDICTED: similar to EEF1A1 protein [Homo sapiens] Length = 105 Score = 221 bits (563), Expect = 1e-58 Identities = 105/105 (100%), Positives = 105/105 (100%) Query: 1 MGKEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAE 60 MGKEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAE Sbjct: 1 MGKEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAE 60 Query: 61 CECGVTIDISPWKFETSKQWTRLLLELTRSPNIPRKLRSLNAYYL 105 CECGVTIDISPWKFETSKQWTRLLLELTRSPNIPRKLRSLNAYYL Sbjct: 61 CECGVTIDISPWKFETSKQWTRLLLELTRSPNIPRKLRSLNAYYL 105 >gi|113429979 PREDICTED: similar to EEF1A1 protein [Homo sapiens] Length = 105 Score = 221 bits (563), Expect = 1e-58 Identities = 105/105 (100%), Positives = 105/105 (100%) Query: 1 MGKEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAE 60 MGKEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAE Sbjct: 1 MGKEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAE 60 Query: 61 CECGVTIDISPWKFETSKQWTRLLLELTRSPNIPRKLRSLNAYYL 105 CECGVTIDISPWKFETSKQWTRLLLELTRSPNIPRKLRSLNAYYL Sbjct: 61 CECGVTIDISPWKFETSKQWTRLLLELTRSPNIPRKLRSLNAYYL 105 >gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo sapiens] Length = 462 Score = 125 bits (314), Expect = 7e-30 Identities = 63/90 (70%), Positives = 70/90 (77%), Gaps = 6/90 (6%) Query: 1 MGKEKAHISITVIGHQDSGKPTTNGHLV------DKRTIENFEKDAAEMGKGFFKYAWVL 54 MGKEK HI+I VIGH DSGK TT GHL+ DKRTIE FEK+AAEMGKG FKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60 Query: 55 HKLKAECECGVTIDISPWKFETSKQWTRLL 84 KLKAE E G+TIDIS WKFETSK + ++ Sbjct: 61 DKLKAERERGITIDISLWKFETSKYYVTII 90 >gi|239757543 PREDICTED: similar to eukaryotic translation elongation factor 1 alpha 2 [Homo sapiens] Length = 444 Score = 124 bits (310), Expect = 2e-29 Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 6/90 (6%) Query: 1 MGKEKAHISITVIGHQDSGKPTTNGHLV------DKRTIENFEKDAAEMGKGFFKYAWVL 54 MGKEK HI+I VIGH DSGK TT GHL+ DKRTIE FEK+AAEMGKG FKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60 Query: 55 HKLKAECECGVTIDISPWKFETSKQWTRLL 84 KLKAE E G+TIDIS WKFET+K + ++ Sbjct: 61 DKLKAERERGITIDISLWKFETTKYYITII 90 >gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo sapiens] Length = 463 Score = 124 bits (310), Expect = 2e-29 Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 6/90 (6%) Query: 1 MGKEKAHISITVIGHQDSGKPTTNGHLV------DKRTIENFEKDAAEMGKGFFKYAWVL 54 MGKEK HI+I VIGH DSGK TT GHL+ DKRTIE FEK+AAEMGKG FKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60 Query: 55 HKLKAECECGVTIDISPWKFETSKQWTRLL 84 KLKAE E G+TIDIS WKFET+K + ++ Sbjct: 61 DKLKAERERGITIDISLWKFETTKYYITII 90 >gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2 [Homo sapiens] Length = 642 Score = 67.4 bits (163), Expect = 2e-12 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 6/86 (6%) Query: 5 KAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKLK 58 K +++ VIGH D+GK T GH+ ++KRT+ +E+++ + GK F YAWVL + Sbjct: 216 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETG 275 Query: 59 AECECGVTIDISPWKFETSKQWTRLL 84 E E GVT+D+ KFET+ + L+ Sbjct: 276 EERERGVTMDVGMTKFETTTKVITLM 301 >gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1 [Homo sapiens] Length = 684 Score = 67.4 bits (163), Expect = 2e-12 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 6/86 (6%) Query: 5 KAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKLK 58 K +++ VIGH D+GK T GH+ ++KRT+ +E+++ + GK F YAWVL + Sbjct: 258 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETG 317 Query: 59 AECECGVTIDISPWKFETSKQWTRLL 84 E E GVT+D+ KFET+ + L+ Sbjct: 318 EERERGVTMDVGMTKFETTTKVITLM 343 >gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] Length = 499 Score = 58.2 bits (139), Expect = 1e-09 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%) Query: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57 +K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L Sbjct: 71 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 130 Query: 58 KAECECGVTIDISPWKFETSKQWTRLL 84 + E + G T+++ FET K+ +L Sbjct: 131 QEERDKGKTVEVGRAYFETEKKHFTIL 157 >gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] Length = 636 Score = 58.2 bits (139), Expect = 1e-09 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%) Query: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57 +K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L Sbjct: 208 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 267 Query: 58 KAECECGVTIDISPWKFETSKQWTRLL 84 + E + G T+++ FET K+ +L Sbjct: 268 QEERDKGKTVEVGRAYFETEKKHFTIL 294 >gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] Length = 637 Score = 58.2 bits (139), Expect = 1e-09 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%) Query: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57 +K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L Sbjct: 209 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 268 Query: 58 KAECECGVTIDISPWKFETSKQWTRLL 84 + E + G T+++ FET K+ +L Sbjct: 269 QEERDKGKTVEVGRAYFETEKKHFTIL 295 >gi|46094014 peptide chain release factor 3 [Homo sapiens] Length = 628 Score = 57.0 bits (136), Expect = 3e-09 Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 6/87 (6%) Query: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57 +K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L Sbjct: 200 KKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 259 Query: 58 KAECECGVTIDISPWKFETSKQWTRLL 84 + E + G T+++ FET ++ +L Sbjct: 260 QEERDKGKTVEVGRAYFETERKHFTIL 286 >gi|34147630 Tu translation elongation factor, mitochondrial precursor [Homo sapiens] Length = 455 Score = 30.0 bits (66), Expect = 0.41 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 9/75 (12%) Query: 3 KEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAEMGKGFFKYAWVLHKLKAECE 62 ++K H+++ IGH D GK T + K AE G FK + E Sbjct: 56 RDKPHVNVGTIGHVDHGKTTLTAAIT---------KILAEGGGAKFKKYEEIDNAPEERA 106 Query: 63 CGVTIDISPWKFETS 77 G+TI+ + ++ T+ Sbjct: 107 RGITINAAHVEYSTA 121 >gi|38788333 remodeling and spacing factor 1 [Homo sapiens] Length = 1441 Score = 28.5 bits (62), Expect = 1.2 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 9 SITVIGHQDSGKPTTNGHLVDKRTIENFEKDAAE 42 +IT +GH+ GK NG + D+R NF+ + E Sbjct: 430 TITALGHE--GKQLVNGEVSDERVAPNFKTEPIE 461 >gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4 [Homo sapiens] Length = 3321 Score = 28.1 bits (61), Expect = 1.5 Identities = 15/68 (22%), Positives = 30/68 (44%) Query: 33 IENFEKDAAEMGKGFFKYAWVLHKLKAECECGVTIDISPWKFETSKQWTRLLLELTRSPN 92 ++N + D + + K+ + ++L EC VT ++ E + +W LL E+ Sbjct: 1697 LQNLQDDLEKQERSLQKFGSITNQLLKECHPPVTETLTNTLKEVNMRWNNLLEEIAEQLQ 1756 Query: 93 IPRKLRSL 100 + L L Sbjct: 1757 SSKALLQL 1764 >gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2 [Homo sapiens] Length = 8749 Score = 28.1 bits (61), Expect = 1.5 Identities = 15/68 (22%), Positives = 30/68 (44%) Query: 33 IENFEKDAAEMGKGFFKYAWVLHKLKAECECGVTIDISPWKFETSKQWTRLLLELTRSPN 92 ++N + D + + K+ + ++L EC VT ++ E + +W LL E+ Sbjct: 7102 LQNLQDDLEKQERSLQKFGSITNQLLKECHPPVTETLTNTLKEVNMRWNNLLEEIAEQLQ 7161 Query: 93 IPRKLRSL 100 + L L Sbjct: 7162 SSKALLQL 7169 >gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1 [Homo sapiens] Length = 8797 Score = 28.1 bits (61), Expect = 1.5 Identities = 15/68 (22%), Positives = 30/68 (44%) Query: 33 IENFEKDAAEMGKGFFKYAWVLHKLKAECECGVTIDISPWKFETSKQWTRLLLELTRSPN 92 ++N + D + + K+ + ++L EC VT ++ E + +W LL E+ Sbjct: 7173 LQNLQDDLEKQERSLQKFGSITNQLLKECHPPVTETLTNTLKEVNMRWNNLLEEIAEQLQ 7232 Query: 93 IPRKLRSL 100 + L L Sbjct: 7233 SSKALLQL 7240 >gi|7262393 ATP-binding cassette, sub-family D (ALD), member 1 [Homo sapiens] Length = 745 Score = 26.9 bits (58), Expect = 3.4 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 8/67 (11%) Query: 30 KRTIENFEKDAAEMGKGFF---KYAWVLHKLKAECECGVTIDISPWKFETSKQWTRLLLE 86 K + EK M + F+ KYA L EC V+ID+ F+ +K LL Sbjct: 602 KDVLSGGEKQRIGMARMFYHRPKYA-----LLDECTSAVSIDVEGKIFQAAKDAGIALLS 656 Query: 87 LTRSPNI 93 +T P++ Sbjct: 657 ITHRPSL 663 >gi|92091572 dedicator of cytokinesis 4 [Homo sapiens] Length = 1966 Score = 26.9 bits (58), Expect = 3.4 Identities = 11/35 (31%), Positives = 21/35 (60%) Query: 3 KEKAHISITVIGHQDSGKPTTNGHLVDKRTIENFE 37 + K H+ +T+I + D GK NG ++ ++ E +E Sbjct: 1250 QRKEHLHLTIIQNFDRGKCWENGIILCRKIAEQYE 1284 >gi|24119166 retinoblastoma binding protein 9 [Homo sapiens] Length = 186 Score = 26.2 bits (56), Expect = 5.9 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 39 DAAEMGKGFFKYAWVLHKLKAEC----ECGVTID-ISPWK 73 D E G+F W K+KA C + G T D PWK Sbjct: 105 DENERASGYFTRPWQWEKIKANCPYIVQFGSTDDPFLPWK 144 >gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo sapiens] Length = 740 Score = 25.8 bits (55), Expect = 7.7 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 8/67 (11%) Query: 30 KRTIENFEKDAAEMGKGFF---KYAWVLHKLKAECECGVTIDISPWKFETSKQWTRLLLE 86 K + EK M + F+ KYA L EC V+ID+ F+ +K LL Sbjct: 606 KDVLSGGEKQRMGMARMFYHKPKYA-----LLDECTSAVSIDVEGKIFQAAKGAGISLLS 660 Query: 87 LTRSPNI 93 +T P++ Sbjct: 661 ITHRPSL 667 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.134 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,118,745 Number of Sequences: 37866 Number of extensions: 151540 Number of successful extensions: 300 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 274 Number of HSP's gapped (non-prelim): 21 length of query: 105 length of database: 18,247,518 effective HSP length: 76 effective length of query: 29 effective length of database: 15,369,702 effective search space: 445721358 effective search space used: 445721358 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.