BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169216709 PREDICTED: hypothetical protein [Homo sapiens] (108 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169216709 PREDICTED: hypothetical protein [Homo sapiens] 215 5e-57 gi|221136769 hypothetical protein LOC100129239 [Homo sapiens] 215 5e-57 gi|113430626 PREDICTED: hypothetical protein LOC729078 [Homo sap... 45 2e-05 gi|113430146 PREDICTED: hypothetical protein LOC729078 [Homo sap... 45 2e-05 gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 39 0.001 gi|168229156 NFKB activating protein [Homo sapiens] 38 0.002 gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens] 38 0.002 gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 38 0.002 gi|56090620 NFKB activating protein-like [Homo sapiens] 38 0.002 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.004 gi|4885379 histone cluster 1, H1e [Homo sapiens] 36 0.006 gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 36 0.008 gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 36 0.008 gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 36 0.008 gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 36 0.008 gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 35 0.010 gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 35 0.013 gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022 gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 34 0.022 gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 34 0.029 gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 33 0.038 gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapi... 33 0.049 gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 33 0.049 gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 33 0.049 gi|33667044 ABI gene family, member 3 (NESH) binding protein [Ho... 33 0.065 gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] 33 0.065 gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] 33 0.065 gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 32 0.084 gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 32 0.084 gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 32 0.084 >gi|169216709 PREDICTED: hypothetical protein [Homo sapiens] Length = 108 Score = 215 bits (548), Expect = 5e-57 Identities = 108/108 (100%), Positives = 108/108 (100%) Query: 1 MAKVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSS 60 MAKVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSS Sbjct: 1 MAKVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSS 60 Query: 61 SQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSVL 108 SQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSVL Sbjct: 61 SQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSVL 108 >gi|221136769 hypothetical protein LOC100129239 [Homo sapiens] Length = 108 Score = 215 bits (548), Expect = 5e-57 Identities = 108/108 (100%), Positives = 108/108 (100%) Query: 1 MAKVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSS 60 MAKVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSS Sbjct: 1 MAKVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSS 60 Query: 61 SQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSVL 108 SQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSVL Sbjct: 61 SQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSVL 108 >gi|113430626 PREDICTED: hypothetical protein LOC729078 [Homo sapiens] Length = 161 Score = 44.7 bits (104), Expect = 2e-05 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 4/108 (3%) Query: 1 MAKVTSEPQKPNEDVDEQTPSTSS----TKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPL 56 MAK T P KP E++ + ST TK +K+ K Q+++ K K K K+PL Sbjct: 1 MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL 60 Query: 57 RGSSSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 + +S +K + + KP+ P + +H+ + K + K + + Sbjct: 61 QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQ 108 Score = 27.3 bits (59), Expect = 2.7 Identities = 14/43 (32%), Positives = 23/43 (53%) Query: 64 AGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 A ET+TP + + PIL + + K KKE+ + Q +T+ Sbjct: 2 AKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTN 44 >gi|113430146 PREDICTED: hypothetical protein LOC729078 [Homo sapiens] Length = 161 Score = 44.7 bits (104), Expect = 2e-05 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 4/108 (3%) Query: 1 MAKVTSEPQKPNEDVDEQTPSTSS----TKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPL 56 MAK T P KP E++ + ST TK +K+ K Q+++ K K K K+PL Sbjct: 1 MAKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTNKNGKVEKKIIKVKKPL 60 Query: 57 RGSSSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 + +S +K + + KP+ P + +H+ + K + K + + Sbjct: 61 QRNSRKKTQSPPSCSKKPRITMRPTIFVCHHKQNKTQHKNQKSKHKRQ 108 Score = 27.3 bits (59), Expect = 2.7 Identities = 14/43 (32%), Positives = 23/43 (53%) Query: 64 AGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 A ET+TP + + PIL + + K KKE+ + Q +T+ Sbjct: 2 AKETHTPVKPKENMKQPILSTKKPTPRTKEKKEKKNSSQQKTN 44 >gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] Length = 484 Score = 38.9 bits (89), Expect = 0.001 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 4/108 (3%) Query: 2 AKVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSR---SGVKGLKTTRKAKRPLRG 58 +K + ++ E +TP S + R+ R+RR R SG + K R KR L Sbjct: 308 SKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSR 367 Query: 59 SSSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 S S + + K K+ R R R K+K K +E D+E+ S Sbjct: 368 SPSPRRHKKEKKKDKDKE-RSRDERERSTSKKKKSKDKEKDRERKSES 414 Score = 37.7 bits (86), Expect = 0.002 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 7/86 (8%) Query: 21 STSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGP 80 STS T+ +KK + ++RS++ K T R+++ S ++ + + PKK R P Sbjct: 306 STSKTRDKKK-EDKEKKRSKTPPKSYSTARRSRS---ASRERRRRRSRSGTRSPKKPRSP 361 Query: 81 ---ILRGRYHRLKEKMKKEEADKEQS 103 + R R +K KK++ DKE+S Sbjct: 362 KRKLSRSPSPRRHKKEKKKDKDKERS 387 Score = 30.0 bits (66), Expect = 0.42 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Query: 16 DEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQK-AGETNTP--AG 72 DE+ STS K K + R+R+S S + TR +G S+K E P G Sbjct: 389 DERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKEEKKPIETG 448 Query: 73 KPKKARGPILRGRYHRLKE-KMKKEEADKEQSETS 106 PK + +G L+E K+ ++ +E + S Sbjct: 449 SPKTKECSVEKGTGDSLRESKVNGDDHHEEDMDMS 483 >gi|168229156 NFKB activating protein [Homo sapiens] Length = 415 Score = 38.1 bits (87), Expect = 0.002 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 18/111 (16%) Query: 8 PQKPNEDVDEQTP-----------STSSTKGRKKGKTPRQR-RSRSGVKGLKTTRKAKRP 55 P+ P D DE TP S S+++ KK K+ R + RS+ K + RK K+ Sbjct: 150 PKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKY 209 Query: 56 LRGSSSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 S S ET++ K+ R + + KEK KK + K + + S Sbjct: 210 SEDSDSDSDSETDSSDEDNKR------RAKKAKKKEKKKKHRSKKYKKKRS 254 >gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens] Length = 885 Score = 37.7 bits (86), Expect = 0.002 Identities = 28/102 (27%), Positives = 46/102 (45%) Query: 6 SEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAG 65 +E + ++ +D +ST + GK ++RR RS V GL+ RK RP + + Sbjct: 506 TESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNKV 565 Query: 66 ETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSV 107 + + +KA L+ R R K E + +QSE V Sbjct: 566 QKKRWQQRGRKANTRPLKRRRKRGPRIPKDENINFKQSELPV 607 >gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] Length = 879 Score = 37.7 bits (86), Expect = 0.002 Identities = 28/102 (27%), Positives = 46/102 (45%) Query: 6 SEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAG 65 +E + ++ +D +ST + GK ++RR RS V GL+ RK RP + + Sbjct: 506 TESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNKV 565 Query: 66 ETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSV 107 + + +KA L+ R R K E + +QSE V Sbjct: 566 QKKRWQQRGRKANTRPLKRRRKRGPRIPKDENINFKQSELPV 607 >gi|56090620 NFKB activating protein-like [Homo sapiens] Length = 402 Score = 37.7 bits (86), Expect = 0.002 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 3/107 (2%) Query: 3 KVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLR---GS 59 ++ S+ P ED +E T SS+ + +++ SRS K + + +KR R S Sbjct: 145 QLDSDEHTPVEDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDS 204 Query: 60 SSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 S +TN+ + KK + + + K K KK + K++S S Sbjct: 205 DSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDS 251 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 36.6 bits (83), Expect = 0.004 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 9/84 (10%) Query: 22 TSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGPI 81 T + +GR + +TP +RRSRS + +R RG S + TPA + + R P+ Sbjct: 577 TPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRS-----RSRTPARRRSRTRSPV 631 Query: 82 LRGRYHRLKEKMKKEEADKEQSET 105 R R + + + + +S T Sbjct: 632 RR----RSRSRSPARRSGRSRSRT 651 Score = 35.4 bits (80), Expect = 0.010 Identities = 20/70 (28%), Positives = 31/70 (44%) Query: 10 KPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNT 69 KP+ E++ S SS + K +TP ++RSRSG ++ P R S + Sbjct: 1548 KPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDK 1607 Query: 70 PAGKPKKARG 79 P P+ G Sbjct: 1608 PRAAPRAQSG 1617 Score = 35.0 bits (79), Expect = 0.013 Identities = 30/103 (29%), Positives = 39/103 (37%), Gaps = 3/103 (2%) Query: 7 EPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRK---AKRPLRGSSSQK 63 EP KP V E + S S T +KK K + R RS + RK K+ R S K Sbjct: 166 EPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESK 225 Query: 64 AGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 + +P K K+ R R K A + S S Sbjct: 226 KRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADS 268 Score = 33.9 bits (76), Expect = 0.029 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Query: 6 SEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAG 65 S P+ P + + S SS + + K +TP +RRS L TRKA+ R S+ + Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPEL--TRKARLSRRSRSASSSP 1714 Query: 66 ETNTPAGKPKKARGP 80 ET + P+ R P Sbjct: 1715 ETRSRT-PPRHRRSP 1728 Score = 32.7 bits (73), Expect = 0.065 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 10/83 (12%) Query: 8 PQKP----NEDVDEQTPSTSSTKGRKKGKTPRQR-RSRSGVKGLKTTRKAKRPLRGSSSQ 62 PQ+P + + + S S+ +GR ++P R RSRS + +++ P R S Sbjct: 537 PQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRS 596 Query: 63 KAGETNTPAGKPKKARGPILRGR 85 + TP + ++R P RGR Sbjct: 597 R-----TPTRRRSRSRTPARRGR 614 Score = 31.6 bits (70), Expect = 0.14 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 6 SEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQR-RSRSGVKGLKTTRKAKRPLRGSSSQKA 64 S P+ + ++ +GR + +TP +R SRS + +R A+R R S Q+ Sbjct: 472 SHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRR 531 Query: 65 GETNTPAGKP--KKARGPILRGR 85 G + +P +P ++R RGR Sbjct: 532 GRSRSPQ-RPGWSRSRNTQRRGR 553 Score = 31.6 bits (70), Expect = 0.14 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 22 TSSTKGRKKGKTPRQR--RSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARG 79 T + +GR + +TP +R RSRS + +++ P RG S + + G+ +R Sbjct: 662 TPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSR---SLVRRGR-SHSRT 717 Query: 80 PILRGRYHRLKEKMKKEEADKEQSETS 106 P RGR E+ K + +S ++ Sbjct: 718 PQRRGRSGSSSERKNKSRTSQRRSRSN 744 Score = 31.6 bits (70), Expect = 0.14 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Query: 22 TSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLR----GSSSQKAGETNTPAGKPKKA 77 T + +GR + +TPR+ RSRS + ++ P R GSSS++ ++ T + + Sbjct: 685 TPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSN 744 Query: 78 RGPILR 83 P ++ Sbjct: 745 SSPEMK 750 Score = 31.6 bits (70), Expect = 0.14 Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 2/104 (1%) Query: 5 TSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKA 64 T ++ + Q+ S + R + + R+RR SG R+ R SS ++ Sbjct: 1782 TRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESS--RTSSRRRR 1839 Query: 65 GETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSVL 108 G + TP K++R + R + + + +S T ++ Sbjct: 1840 GRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLI 1883 Score = 31.2 bits (69), Expect = 0.19 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 21 STSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGP 80 S + + R + +TP +RRSRS + +++ P R + T +P + ++R P Sbjct: 586 SRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR-----RRSRTRSPVRRRSRSRSP 640 Query: 81 ILRGRYHRLKEKMKK 95 R R + ++ Sbjct: 641 ARRSGRSRSRTPARR 655 Score = 30.4 bits (67), Expect = 0.32 Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 15/86 (17%) Query: 18 QTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKA 77 ++PS SS + +K ++ R+RRS S + T+R+ + +P+ KP+ Sbjct: 1726 RSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGR---------------SPSPKPRGL 1770 Query: 78 RGPILRGRYHRLKEKMKKEEADKEQS 103 + R R + + +++ + QS Sbjct: 1771 QRSRSRSRREKTRTTRRRDRSGSSQS 1796 Score = 26.9 bits (58), Expect = 3.5 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 17 EQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKK 76 +++ TSS + R + +TP R RS + K R ++ + + TP ++ Sbjct: 1828 QESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRR 1887 Query: 77 AR---GPILRGR 85 +R P+ R R Sbjct: 1888 SRSRTSPVSRRR 1899 Score = 26.6 bits (57), Expect = 4.6 Identities = 16/62 (25%), Positives = 27/62 (43%) Query: 17 EQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKK 76 E++ S SS + +TP +RSRSG + + P S S + ++ P + Sbjct: 1515 ERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLR 1574 Query: 77 AR 78 R Sbjct: 1575 QR 1576 Score = 26.6 bits (57), Expect = 4.6 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 1/81 (1%) Query: 1 MAKVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSS 60 + +V S P E V E P + RK+ + S S ++ + SS Sbjct: 2576 LKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2635 Query: 61 SQKAGETNTPAGKPKKAR-GP 80 S + +++ + P A+ GP Sbjct: 2636 SSSSSSSSSSSSSPSPAKPGP 2656 Score = 25.8 bits (55), Expect = 7.9 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 8 PQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGET 67 P++ ++ ++ S SS K PR+ RS S +K+K P R S S + Sbjct: 786 PKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSP---PPKQKSKTPSRQSHSSSSPHP 842 Query: 68 NTPAGKPKK 76 +G P + Sbjct: 843 KVKSGTPPR 851 >gi|4885379 histone cluster 1, H1e [Homo sapiens] Length = 219 Score = 36.2 bits (82), Expect = 0.006 Identities = 25/90 (27%), Positives = 33/90 (36%) Query: 3 KVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQ 62 K +KP + TP S+ K KK K P K K + AK S Sbjct: 130 KPAGAAKKPKKATGAATPKKSAKKTPKKAKKPAAAAGAKKAKSPKKAKAAKPKKAPKSPA 189 Query: 63 KAGETNTPAGKPKKARGPILRGRYHRLKEK 92 KA A KPK A+ + + K+K Sbjct: 190 KAKAVKPKAAKPKTAKPKAAKPKKAAAKKK 219 >gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] Length = 1007 Score = 35.8 bits (81), Expect = 0.008 Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 40/124 (32%) Query: 13 EDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRP-LRGSSSQKAGETNTPA 71 E V E+T + S +K RKK K+P +R K RK+K P LR S +K G+ +P Sbjct: 206 EIVKEKT-TRSKSKERKKSKSPSKRS-----KSQDQARKSKSPTLRRRSQEKIGKARSPT 259 Query: 72 ---------------------------GKPKKARGPI-LRG----RYHRLKE-KMKKEEA 98 + KK+R P+ LRG R R KE K K+ E Sbjct: 260 DDKVKIEDKSKSKDRKKSPIINESRSRDRGKKSRSPVDLRGKSKDRRSRSKERKSKRSET 319 Query: 99 DKEQ 102 DKE+ Sbjct: 320 DKEK 323 Score = 32.3 bits (72), Expect = 0.084 Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 13/109 (11%) Query: 3 KVTSEPQKPNEDV-------DEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRP 55 +++S +P +D+ + +P + R++ ++P +RRSRS + R+++ P Sbjct: 408 RLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPL------RRSRSP 461 Query: 56 LRGSSSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 R S S + + + + R GR R + K+K+++ SE Sbjct: 462 RRRSRSPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKVKEDKFKGSLSE 510 Score = 29.6 bits (65), Expect = 0.55 Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 20/123 (16%) Query: 3 KVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQ----------RRSRSGVKGLKT--TR 50 KV E + ++D +++P + ++ R +GK R RRSRS + K T Sbjct: 262 KVKIEDKSKSKD-RKKSPIINESRSRDRGKKSRSPVDLRGKSKDRRSRSKERKSKRSETD 320 Query: 51 KAKRPLRGSSSQKAG--ETNTPAGKP-----KKARGPILRGRYHRLKEKMKKEEADKEQS 103 K K+P++ S + E +P+ +P +++ P R + R + + + K+ Sbjct: 321 KEKKPIKSPSKDASSGKENRSPSRRPGRSPKRRSLSPKPRDKSRRSRSPLLNDRRSKQSK 380 Query: 104 ETS 106 S Sbjct: 381 SPS 383 >gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] Length = 360 Score = 35.8 bits (81), Expect = 0.008 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%) Query: 6 SEPQKPNEDVD-EQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKA 64 SE +K D + S S+++GRK P S S ++ +KA+R R SSS + Sbjct: 144 SEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEASPSPCITERSKQKARRRTRSSSSSSS 203 Query: 65 GETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 +++ + + GR R K K K+ + K++ + Sbjct: 204 SSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKK 243 Score = 28.5 bits (62), Expect = 1.2 Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 8/88 (9%) Query: 17 EQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKK 76 E +PS T+ + K +RR+RS ++ + SSS + +++ G+ K+ Sbjct: 176 EASPSPCITE---RSKQKARRRTRSSSSSSSSSSSS-----SSSSSSSSSSSSSDGRKKR 227 Query: 77 ARGPILRGRYHRLKEKMKKEEADKEQSE 104 + R + + ++K+KK+ +K +++ Sbjct: 228 GKYKDKRRKKKKKRKKLKKKGKEKAEAQ 255 >gi|116089325 splicing factor, arginine/serine-rich 12 isoform a [Homo sapiens] Length = 624 Score = 35.8 bits (81), Expect = 0.008 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 5/99 (5%) Query: 9 QKPNEDVDEQTPSTSSTKGRKKGKTPRQ---RRSRSGVKGLKTTRKAKRPLRGSSSQKAG 65 +K +D +TP S R+ + R+ RRSRS + +T++ KR + S S Sbjct: 469 EKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKR--KSSRSPSPR 526 Query: 66 ETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 N K +K R I R M+K D++ E Sbjct: 527 SRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKE 565 Score = 33.9 bits (76), Expect = 0.029 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 21 STSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGP 80 S S K R++ K+P ++RS+S + +R R R + +K E K ++ Sbjct: 341 SRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERE 400 Query: 81 ILRGRYHRLKEKMKKEEADKEQSE 104 + R + KE+ K ++ DKE+ + Sbjct: 401 REKER-EKEKERGKNKDRDKEREK 423 Score = 30.4 bits (67), Expect = 0.32 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 11/109 (10%) Query: 3 KVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQ-----RRSRSGVKGLKTTRKAKRPLR 57 K + ++ + D K KK +TP + RRSRS ++R+ +R Sbjct: 449 KEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRS------SSRERRRRRS 502 Query: 58 GSSSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 SSS+ + T K ++ P R + + +EK + +++ + E S Sbjct: 503 RSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERS 551 >gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [Homo sapiens] Length = 508 Score = 35.8 bits (81), Expect = 0.008 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 5/99 (5%) Query: 9 QKPNEDVDEQTPSTSSTKGRKKGKTPRQ---RRSRSGVKGLKTTRKAKRPLRGSSSQKAG 65 +K +D +TP S R+ + R+ RRSRS + +T++ KR + S S Sbjct: 353 EKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKR--KSSRSPSPR 410 Query: 66 ETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 N K +K R I R M+K D++ E Sbjct: 411 SRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKE 449 Score = 33.9 bits (76), Expect = 0.029 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 21 STSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGP 80 S S K R++ K+P ++RS+S + +R R R + +K E K ++ Sbjct: 225 SRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERE 284 Query: 81 ILRGRYHRLKEKMKKEEADKEQSE 104 + R + KE+ K ++ DKE+ + Sbjct: 285 REKER-EKEKERGKNKDRDKEREK 307 Score = 30.4 bits (67), Expect = 0.32 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 11/109 (10%) Query: 3 KVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQ-----RRSRSGVKGLKTTRKAKRPLR 57 K + ++ + D K KK +TP + RRSRS ++R+ +R Sbjct: 333 KEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRS------SSRERRRRRS 386 Query: 58 GSSSQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 SSS+ + T K ++ P R + + +EK + +++ + E S Sbjct: 387 RSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERS 435 >gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] Length = 494 Score = 35.4 bits (80), Expect = 0.010 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 14/100 (14%) Query: 17 EQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTR-------KAKRPLRGSSSQKAGETNT 69 E+ S ++GR + K+ RQ RSRS KG +R K KR R S +++ + Sbjct: 310 EEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSR 369 Query: 70 PAGKPKKARGPILRGRYHRLK----EKMKKEEADKEQSET 105 K +++R RG K +K KKE+ D+ QS + Sbjct: 370 SRSKSERSR---KRGSKRDSKAGSSKKKKKEDTDRSQSRS 406 Score = 34.7 bits (78), Expect = 0.017 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 18 QTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRK-AKRPLRGSSSQKAGETNTPAGKPKK 76 ++ S KGRK+ + + RSRS K ++ ++ +KR + SS+K + +T + + Sbjct: 347 RSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRS 406 Query: 77 ARGPILRGRYHRLKEKMKKE 96 + + R H E ++E Sbjct: 407 PSRSVSKEREHAKSESSQRE 426 Score = 33.5 bits (75), Expect = 0.038 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 3/90 (3%) Query: 21 STSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPA---GKPKKA 77 S S ++ R + + R+ RSRSG ++ R GS S+ + + + K +K+ Sbjct: 188 SRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKS 247 Query: 78 RGPILRGRYHRLKEKMKKEEADKEQSETSV 107 R P R K K+Q+E + Sbjct: 248 RSPSKEKSRSRSHSAGKSRSKSKDQAEEKI 277 >gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] Length = 1020 Score = 35.0 bits (79), Expect = 0.013 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%) Query: 8 PQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTR-KAKRPLRGSSSQKA-G 65 P+K E+ S + K +K K+P + ++S + + +AK P S +KA Sbjct: 581 PEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKS 640 Query: 66 ETNTPAGKPKKARGPILRGRY--HRLKEKMKKEEADKEQSETSV 107 T A P+KA+ P + K +K E E++++ V Sbjct: 641 PTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPV 684 Score = 31.2 bits (69), Expect = 0.19 Identities = 21/99 (21%), Positives = 44/99 (44%), Gaps = 4/99 (4%) Query: 7 EPQKPNEDVDEQ--TPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKA 64 E + P + E+ +P K +K K+P + +++ K + + K P++ + Sbjct: 773 EARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQE 832 Query: 65 GETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQS 103 + P K ++ + P K+ KKEEA K+++ Sbjct: 833 VKVKEPPKKAEEEKAPATPKTEE--KKDSKKEEAPKKEA 869 Score = 31.2 bits (69), Expect = 0.19 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 5/109 (4%) Query: 3 KVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLK--TTRKAKRPLRGSS 60 KV P+K E+ TP T K KK + P++ + V+ K K K + Sbjct: 834 KVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAK 893 Query: 61 SQKAGETNTPAGKPKKARGPILRGRYHRLKEK---MKKEEADKEQSETS 106 ++A + K+A + + KEK KKE D + E S Sbjct: 894 KEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPS 942 Score = 28.9 bits (63), Expect = 0.93 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 17/106 (16%) Query: 4 VTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTR-KAKRPLRGSSSQ 62 V +E + P + ++P + K +K K+P + ++S K + +AK P + S Sbjct: 670 VKAEAKSPEK---AKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPV 726 Query: 63 KAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSVL 108 K A P+KA+ P+ KE+ K E K + L Sbjct: 727 K-----EEAKTPEKAKSPV--------KEEAKSPEKAKSPEKAKTL 759 Score = 26.2 bits (56), Expect = 6.0 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 2/69 (2%) Query: 7 EPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVK-GLKTTRKAKRPLRGSSSQKAG 65 EP KP E E P TK K K + ++ + K KT K + ++K+ Sbjct: 940 EPSKPAEK-KEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSS 998 Query: 66 ETNTPAGKP 74 T+ KP Sbjct: 999 STDQKDSKP 1007 >gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] Length = 248 Score = 34.3 bits (77), Expect = 0.022 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%) Query: 24 STKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGPILR 83 +TK +KK KT +++ ++ K KTT K K+ R ++++K T T + +K + Sbjct: 31 TTKKKKKKKTTMKKKKKTTTKK-KTTTKTKK--RTTTTKKTTTTTTKEKEKEKEKEKEKE 87 Query: 84 GRYHRLKEKMKKEEADKEQSE 104 + KEK KK++ K++ + Sbjct: 88 KEKEKEKEKEKKKKKKKKKKK 108 >gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] Length = 352 Score = 34.3 bits (77), Expect = 0.022 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 6 SEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAG 65 SE +K D ++ST +K T RS K + TR + SSS + Sbjct: 144 SEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEERSKQKARRRTRSSSSSSSSSSSSSSS 203 Query: 66 ETNTPAGKP---KKARGPILRGRYHRLKEKMKKEEADKEQSE 104 +++ + +K RG R + K++ K ++ KE++E Sbjct: 204 SSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAE 245 >gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo sapiens] Length = 351 Score = 33.9 bits (76), Expect = 0.029 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 10/86 (11%) Query: 23 SSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPA-----GKPKKA 77 + ++G K RQ+ + +GVK +R K+PLRG Q+ NT + KP+KA Sbjct: 227 AKSRGGGDKKLERQKAALTGVK----SRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKA 282 Query: 78 RGPILRGRYHRLKEKMKKEEADKEQS 103 + R R EK +K EA + Q+ Sbjct: 283 AAAGAKSRGGR-GEKPQKAEAGQGQN 307 >gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] Length = 275 Score = 33.5 bits (75), Expect = 0.038 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Query: 9 QKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETN 68 +K E ++Q K RKK + R+ R R +G + ++ KR + +K E N Sbjct: 120 RKERERENKQRRERKRKKRRKKKR--RKERKREKERGKRERKRKKR--KKEEREKKRERN 175 Query: 69 TPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQ 102 K ++ R + R KE+ KK+E K++ Sbjct: 176 RKERKKERERKERRERKKERKKERRKKKERKKDR 209 Score = 32.7 bits (73), Expect = 0.065 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Query: 20 PSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARG 79 P T RKK + R++R R K RK +R + +K E + +K R Sbjct: 28 PCTQRESERKKERREREKRKREREK----ERKRERGKKEKKKRKKRERGKERERKRKERE 83 Query: 80 PILRGRYHRLKEKMKKEEADKEQSE 104 + R + + K KKE+ +E+ + Sbjct: 84 KQRKERREKERRKRKKEKKKRERKQ 108 Score = 32.3 bits (72), Expect = 0.084 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 6 SEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAG 65 SE +K + +++ + R++GK +++R + +G + RK K + ++ Sbjct: 34 SERKKERREREKRKREREKERKRERGKKEKKKRKKRE-RGKERERKRKEREKQRKERREK 92 Query: 66 ETNTPAGKPKKARGPILRGRYHRLKEKMKKE 96 E K KK R RGR R K+K +KE Sbjct: 93 ERRKRK-KEKKKRERKQRGRRERKKKKERKE 122 Score = 31.2 bits (69), Expect = 0.19 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Query: 26 KGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGPILR-- 83 K R+K K +++R R + +K +R R +++ E + KK R R Sbjct: 92 KERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREK 151 Query: 84 --GRYHRLKEKMKKEEADKEQ 102 G+ R ++K KKEE +K++ Sbjct: 152 ERGKRERKRKKRKKEEREKKR 172 Score = 28.9 bits (63), Expect = 0.93 Identities = 20/98 (20%), Positives = 42/98 (42%) Query: 7 EPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGE 66 E +K ++ ++ + RKK K ++R + + + +K ++ R ++ E Sbjct: 93 ERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKE 152 Query: 67 TNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 K KK + + R +++ KKE KE+ E Sbjct: 153 RGKRERKRKKRKKEEREKKRERNRKERKKERERKERRE 190 Score = 26.2 bits (56), Expect = 6.0 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 26 KGRKKGKTPRQRRSRSGV------KGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARG 79 +GR++ K ++R+ R + K RK KR ++ G+ K KK Sbjct: 109 RGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEER 168 Query: 80 PILR--GRYHRLKEKMKKEEADKEQ 102 R R R KE+ +KE ++++ Sbjct: 169 EKKRERNRKERKKERERKERRERKK 193 >gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapiens] Length = 1758 Score = 33.1 bits (74), Expect = 0.049 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 10/100 (10%) Query: 14 DVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKT------TRKAKRPLRGSSSQKAGET 67 D+ QTP GR R +SG+K KT T+ A+ +GS + AG + Sbjct: 1173 DIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVAEEENKGSGTGAAGAS 1232 Query: 68 NTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETSV 107 +T + GP L + L+E + D S +SV Sbjct: 1233 DTTIKPNAENTGPTLEWDNYDLRE----DALDDSVSSSSV 1268 >gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] Length = 245 Score = 33.1 bits (74), Expect = 0.049 Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 7 EPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGE 66 E ++ E ++ + R++ K R++ ++ G + K +K K+ RG +S++ E Sbjct: 74 EKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKE-RGRTSKEGKE 132 Query: 67 TNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 + ++ R R + R KE+ +KE +E+ + Sbjct: 133 RERKEERKREERKERERKKEEREKERERKERKKRERKQ 170 Score = 32.3 bits (72), Expect = 0.084 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 7/103 (6%) Query: 5 TSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTT---RKAKRPLRGSSS 61 TS+ K E +E+ + RKK + ++R + K + ++ +R + Sbjct: 126 TSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKE 185 Query: 62 QKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 +K E N K ++ R + R R KE+ KKEE KE+ + Sbjct: 186 RKKRERNRKERKKERER----KERRERKKERKKKEERKKERQK 224 Score = 31.6 bits (70), Expect = 0.14 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Query: 1 MAKVTSEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSS 60 ++K ++P +E + + + +G+K+ ++ R++ R K + K ++ RG Sbjct: 25 ISKPCTQPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERG-K 83 Query: 61 SQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 +K GE + KK R + KEK KK+E KE+ TS Sbjct: 84 KEKKGERKKEERERKKRRRE-KENKEGEEKEKRKKKE-KKERGRTS 127 Score = 26.9 bits (58), Expect = 3.5 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 11/87 (12%) Query: 17 EQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKK 76 E+ +G+K+ K R++ R K R+ K G +K + K KK Sbjct: 72 EREKERKRERGKKEKKGERKKEERE----RKKRRREKENKEGEEKEKRKK------KEKK 121 Query: 77 ARGPILR-GRYHRLKEKMKKEEADKEQ 102 RG + G+ KE+ K+EE + + Sbjct: 122 ERGRTSKEGKERERKEERKREERKERE 148 >gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sapiens] Length = 1912 Score = 33.1 bits (74), Expect = 0.049 Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 21/114 (18%) Query: 9 QKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSS-------- 60 + P ED+ E T K +KK K PR + + K R L SS Sbjct: 37 EDPEEDLSET--ETPKLKKKKKPKKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVE 94 Query: 61 --------SQKAGETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSETS 106 S G TP K KK GP + + K K K+EE +++ + S Sbjct: 95 EEEEVALRSDSEGSDYTPGKKKKKKLGP---KKEKKSKSKRKEEEEEEDDDDDS 145 >gi|33667044 ABI gene family, member 3 (NESH) binding protein [Homo sapiens] Length = 1075 Score = 32.7 bits (73), Expect = 0.065 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Query: 5 TSEPQKPNEDVDEQTPSTSST-KGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQK 63 TS +P +QT S ST K R + K PR + R+ G T + +K P ++ Sbjct: 449 TSPEMQPTTPAPQQTTSIPSTPKRRPRPKPPRTKPERTTSAGTITPKISKSPEPTWTTPA 508 Query: 64 AGETNTPAGKPKKARGP 80 G+T + KPK P Sbjct: 509 PGKTQFISLKPKIPLSP 525 >gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] Length = 338 Score = 32.7 bits (73), Expect = 0.065 Identities = 19/81 (23%), Positives = 37/81 (45%) Query: 24 STKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGPILR 83 S K +KK + R + ++ +KA+R R SSS + +++ + + Sbjct: 144 SEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSD 203 Query: 84 GRYHRLKEKMKKEEADKEQSE 104 GR R K K K+ + K++ + Sbjct: 204 GRKKRGKYKDKRRKKKKKRKK 224 Score = 31.2 bits (69), Expect = 0.19 Identities = 21/99 (21%), Positives = 49/99 (49%), Gaps = 6/99 (6%) Query: 6 SEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAG 65 SE +K D ++ST +++ K +RR+RS ++ + SSS + Sbjct: 144 SEKRKKKSRKDTSRNCSASTS-QERSKQKARRRTRSSSSSSSSSSSS-----SSSSSSSS 197 Query: 66 ETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 +++ G+ K+ + R + + ++K+KK+ +K +++ Sbjct: 198 SSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQ 236 >gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] Length = 341 Score = 32.7 bits (73), Expect = 0.065 Identities = 19/81 (23%), Positives = 37/81 (45%) Query: 24 STKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGPILR 83 S K +KK + R + ++ +KA+R R SSS + +++ + + Sbjct: 144 SEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSD 203 Query: 84 GRYHRLKEKMKKEEADKEQSE 104 GR R K K K+ + K++ + Sbjct: 204 GRKKRGKYKDKRRKKKKKRKK 224 Score = 31.2 bits (69), Expect = 0.19 Identities = 21/99 (21%), Positives = 49/99 (49%), Gaps = 6/99 (6%) Query: 6 SEPQKPNEDVDEQTPSTSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAG 65 SE +K D ++ST +++ K +RR+RS ++ + SSS + Sbjct: 144 SEKRKKKSRKDTSRNCSASTS-QERSKQKARRRTRSSSSSSSSSSSS-----SSSSSSSS 197 Query: 66 ETNTPAGKPKKARGPILRGRYHRLKEKMKKEEADKEQSE 104 +++ G+ K+ + R + + ++K+KK+ +K +++ Sbjct: 198 SSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQ 236 >gi|56676397 ankyrin repeat domain 11 [Homo sapiens] Length = 2663 Score = 32.3 bits (72), Expect = 0.084 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 2/94 (2%) Query: 17 EQTPSTSSTKGRKKGKTPRQRRSRSGVK--GLKTTRKAKRPLRGSSSQKAGETNTPAGKP 74 ++ + S K R+ G+ + R +K G ++ K K + E + PA + Sbjct: 950 DRKDALESCKERRDGRAKPEEAHREELKECGCESGFKDKSDGDFGKGLEPWERHHPAREK 1009 Query: 75 KKARGPILRGRYHRLKEKMKKEEADKEQSETSVL 108 +K GP + E+ K++ +DK++SE S+L Sbjct: 1010 EKKDGPDKERKEKTKPERYKEKSSDKDKSEKSIL 1043 Score = 28.1 bits (61), Expect = 1.6 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 15/92 (16%) Query: 28 RKKGKTPRQRRSRSGV------KGLKTTRKAKRPLRGSSSQK------AGETNTPAGKPK 75 R+K K PR RR G K K K K S++K ++ K Sbjct: 1175 RQKDKEPRDRRKDRGAADAGRDKKEKVFEKHKEKKDKESTEKYKDRKDRASVDSTQDKKN 1234 Query: 76 KARGPILRGRYHRLKEKMK---KEEADKEQSE 104 K + P + H ++K K KE++DKE S+ Sbjct: 1235 KQKLPEKAEKKHAAEDKAKSKHKEKSDKEHSK 1266 >gi|62460633 RNA-binding motif protein 16 [Homo sapiens] Length = 1271 Score = 32.3 bits (72), Expect = 0.084 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 10/75 (13%) Query: 21 STSSTKGRKKGKTPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKAGETNTPAGKPKKARGP 80 S S T R + ++PR+RRSRS K RK ++ R S ++ +++ ++AR Sbjct: 398 SRSRTHSRSRSRSPRKRRSRSRSGSRK--RKHRKRSRSRSRERKRKSSRSYSSERRAR-- 453 Query: 81 ILRGRYHRLKEKMKK 95 R KE+ KK Sbjct: 454 ------EREKERQKK 462 >gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1 [Homo sapiens] Length = 1828 Score = 32.3 bits (72), Expect = 0.084 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%) Query: 9 QKPNEDVDEQTPSTSSTKGRKKGK----TPRQRRSRSGVKGLKTTRKAKRPLRGSSSQKA 64 Q+P+ED EQ S S +KK K PR+ + VK T++ KR + SS + Sbjct: 153 QEPSEDEQEQGTSAESEPEQKKVKARRPVPRRTVPKPRVKKQPKTQRGKRKKQDSSDEDD 212 Query: 65 GETNTPAGKPKK 76 + P + ++ Sbjct: 213 DDDEAPKRQTRR 224 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.301 0.120 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,436,452 Number of Sequences: 37866 Number of extensions: 203803 Number of successful extensions: 1448 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 189 Number of HSP's that attempted gapping in prelim test: 1076 Number of HSP's gapped (non-prelim): 525 length of query: 108 length of database: 18,247,518 effective HSP length: 78 effective length of query: 30 effective length of database: 15,293,970 effective search space: 458819100 effective search space used: 458819100 T: 11 A: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.8 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.