Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169215894
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169215894 PREDICTED: similar to hCG1732289 [Homo sapiens]
(370 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169215894 PREDICTED: similar to hCG1732289 [Homo sapiens] 763 0.0
gi|169215721 PREDICTED: similar to hCG1732289 [Homo sapiens] 721 0.0
gi|169215507 PREDICTED: similar to hCG1732289 [Homo sapiens] 686 0.0
gi|34303932 transmembrane and coiled-coil domains 5A [Homo sapiens] 49 6e-06
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 40 0.003
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 36 0.063
gi|169215927 PREDICTED: hypothetical protein [Homo sapiens] 36 0.063
gi|239752137 PREDICTED: hypothetical protein [Homo sapiens] 36 0.063
gi|169215514 PREDICTED: hypothetical protein [Homo sapiens] 36 0.063
gi|169215483 PREDICTED: hypothetical protein isoform 2 [Homo sap... 36 0.063
gi|228008410 BEN domain containing 4 isoform b [Homo sapiens] 36 0.063
gi|148762950 BEN domain containing 4 isoform a [Homo sapiens] 36 0.063
gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo ... 35 0.083
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 35 0.14
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 35 0.14
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 35 0.14
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 34 0.18
gi|169213977 PREDICTED: hypothetical protein [Homo sapiens] 34 0.24
gi|169214385 PREDICTED: hypothetical protein [Homo sapiens] 34 0.24
gi|169213314 PREDICTED: hypothetical protein [Homo sapiens] 34 0.24
gi|222446616 hypothetical protein LOC341346 [Homo sapiens] 33 0.31
gi|239754510 PREDICTED: similar to hCG1644697 [Homo sapiens] 33 0.41
gi|239749071 PREDICTED: similar to hCG1644697 [Homo sapiens] 33 0.41
gi|239743097 PREDICTED: similar to hCG1644697 [Homo sapiens] 33 0.41
gi|239508749 PREDICTED: similar to hCG1644697 [Homo sapiens] 33 0.41
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 33 0.41
gi|55741447 pleckstrin homology domain containing, family H (wit... 33 0.54
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 32 0.70
gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo sap... 32 1.2
gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo sap... 32 1.2
>gi|169215894 PREDICTED: similar to hCG1732289 [Homo sapiens]
Length = 370
Score = 763 bits (1971), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MEVGAGGQCPCDNDLLAMQKSFGWVDSSAAAPENHLACSGHCFCRGMVPSGGETGNCTTA 60
MEVGAGGQCPCDNDLLAMQKSFGWVDSSAAAPENHLACSGHCFCRGMVPSGGETGNCTTA
Sbjct: 1 MEVGAGGQCPCDNDLLAMQKSFGWVDSSAAAPENHLACSGHCFCRGMVPSGGETGNCTTA 60
Query: 61 PTGSTVRLEEQSFLQLEQENHSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWP 120
PTGSTVRLEEQSFLQLEQENHSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWP
Sbjct: 61 PTGSTVRLEEQSFLQLEQENHSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWP 120
Query: 121 PDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGFIR 180
PDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGFIR
Sbjct: 121 PDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGFIR 180
Query: 181 EGGLRAVGQWAQRGGTGHPADAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMH 240
EGGLRAVGQWAQRGGTGHPADAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMH
Sbjct: 181 EGGLRAVGQWAQRGGTGHPADAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMH 240
Query: 241 MALNNQATGLLNLKKDIRGVLDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGS 300
MALNNQATGLLNLKKDIRGVLDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGS
Sbjct: 241 MALNNQATGLLNLKKDIRGVLDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGS 300
Query: 301 SKGLAGQLWLLTLRLLLGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFL 360
SKGLAGQLWLLTLRLLLGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFL
Sbjct: 301 SKGLAGQLWLLTLRLLLGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFL 360
Query: 361 RLKVDGFLPF 370
RLKVDGFLPF
Sbjct: 361 RLKVDGFLPF 370
>gi|169215721 PREDICTED: similar to hCG1732289 [Homo sapiens]
Length = 391
Score = 721 bits (1861), Expect = 0.0
Identities = 350/356 (98%), Positives = 353/356 (99%)
Query: 15 LLAMQKSFGWVDSSAAAPENHLACSGHCFCRGMVPSGGETGNCTTAPTGSTVRLEEQSFL 74
++ + SFGWVDSSAAAPENHLACSGHCFCRGMVPSGGETGNCTTAPTGSTVRLEEQSFL
Sbjct: 36 VVVVMVSFGWVDSSAAAPENHLACSGHCFCRGMVPSGGETGNCTTAPTGSTVRLEEQSFL 95
Query: 75 QLEQENHSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWPPDPAGTQPLGNRAP 134
QLEQENHSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWPPDPAGTQPLGNRAP
Sbjct: 96 QLEQENHSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWPPDPAGTQPLGNRAP 155
Query: 135 LQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGFIREGGLRAVGQWAQRG 194
LQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGFIREGGLRAVGQWAQRG
Sbjct: 156 LQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGFIREGGLRAVGQWAQRG 215
Query: 195 GTGHPADAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLNLK 254
GTGHPADAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLNLK
Sbjct: 216 GTGHPADAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLNLK 275
Query: 255 KDIRGVLDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGSSKGLAGQLWLLTLR 314
KDIRGVLDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGSSKGLAGQLWLLTLR
Sbjct: 276 KDIRGVLDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGSSKGLAGQLWLLTLR 335
Query: 315 LLLGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFLPF 370
LLLGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFLPF
Sbjct: 336 LLLGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFLPF 391
>gi|169215507 PREDICTED: similar to hCG1732289 [Homo sapiens]
Length = 490
Score = 686 bits (1771), Expect = 0.0
Identities = 338/350 (96%), Positives = 338/350 (96%), Gaps = 11/350 (3%)
Query: 21 SFGWVDSSAAAPENHLACSGHCFCRGMVPSGGETGNCTTAPTGSTVRLEEQSFLQLEQEN 80
SFGWVDSS AAPENHLACSGHCFCRGMVPSGG STVRLEEQSFLQLEQEN
Sbjct: 152 SFGWVDSSTAAPENHLACSGHCFCRGMVPSGG-----------STVRLEEQSFLQLEQEN 200
Query: 81 HSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWPPDPAGTQPLGNRAPLQLLRR 140
HSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWPPDPAGTQPLGNRAPLQLLRR
Sbjct: 201 HSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWPPDPAGTQPLGNRAPLQLLRR 260
Query: 141 ELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGFIREGGLRAVGQWAQRGGTGHPA 200
ELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGFIREGGLRAVGQWAQRGGTGHPA
Sbjct: 261 ELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGFIREGGLRAVGQWAQRGGTGHPA 320
Query: 201 DAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGV 260
DAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGV
Sbjct: 321 DAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGV 380
Query: 261 LDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGSSKGLAGQLWLLTLRLLLGAL 320
LDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGSSKGLAGQLWLLTLRLLLGAL
Sbjct: 381 LDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGSSKGLAGQLWLLTLRLLLGAL 440
Query: 321 LVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFLPF 370
LVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFLPF
Sbjct: 441 LVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFLPF 490
>gi|34303932 transmembrane and coiled-coil domains 5A [Homo sapiens]
Length = 288
Score = 49.3 bits (116), Expect = 6e-06
Identities = 37/159 (23%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 214 ELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGVLDQMEDIQLEILR 273
+LQQ+ + ++ + +V A + +QA + ++ ++ + +++E + LE R
Sbjct: 131 KLQQLEASYACQEKELLKVMKEYAFVTQLCEDQALYIKKYQETLKKIEEELEALFLE--R 188
Query: 274 ERAQCRTRARKEKQMASMS-KGRPKLGSSKGLAGQLW--LLTLRLLLGALLVWTAAYVYV 330
E ++ + EK+ S + +G P +++ + +++ L + L LL + +V
Sbjct: 189 EVSKLVSMNPVEKEHTSQNNEGTPTQKTARLFSKKIFCCLFFITLFFIRLLSYMFFHVRF 248
Query: 331 VNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFLP 369
+NP ++P +L R+T+WKLR P L L+ + LP
Sbjct: 249 INPDLLVNVLPKVLGRSTLWKLRCFFFPSLTLETEDMLP 287
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 40.0 bits (92), Expect = 0.003
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 25/163 (15%)
Query: 66 VRLEEQSFLQ--LEQENHSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWPPDP 123
++LEE+ Q +EQE +L+ N +L EQL +Q + P SS T L P
Sbjct: 529 IKLEEKKKTQAEIEQEMATLQYTNPQLLEQLKIERLAQKQVEQIQPPPSSGTPLLGP--- 585
Query: 124 AGTQPLGNRAPLQLLRRELCQ---GQEAFVQQSQVGLG-----------EGLWG--GRKL 167
QP + P+ + + Q Q+ + +Q+G +G G G L
Sbjct: 586 ---QPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPL 642
Query: 168 RNSTPGGPEGFIREGGLRAVGQWAQRGGTGHPADAAQAHPGPH 210
GGP+GF+ G + Q R H Q HPGPH
Sbjct: 643 HQGG-GGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPH 684
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 35.8 bits (81), Expect = 0.063
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 206 HPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLN--------LKKDI 257
H + +LQ++++ F + V TE+ D V ++ + L+N TGLL+ L KD
Sbjct: 1245 HKRKKVEAQLQELQVKFNEGERVRTELADKVTKLQVELDN-VTGLLSQSDSKSSKLTKDF 1303
Query: 258 RGVLDQMEDIQLEILRERAQCRTRARKEKQM 288
+ Q++D Q + E Q + + K KQ+
Sbjct: 1304 SALESQLQDTQELLQEENRQKLSLSTKLKQV 1334
>gi|169215927 PREDICTED: hypothetical protein [Homo sapiens]
Length = 357
Score = 35.8 bits (81), Expect = 0.063
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 310 LLTLRLL-LGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFL 368
LLTL LL LG L+WT +++P + L S T+ +LR L P L L+ +G L
Sbjct: 300 LLTLPLLFLGLSLLWTV----LLDPGAVSAWLWSLTSETTLRRLRYTLSPLLELRANGLL 355
Query: 369 P 369
P
Sbjct: 356 P 356
>gi|239752137 PREDICTED: hypothetical protein [Homo sapiens]
Length = 357
Score = 35.8 bits (81), Expect = 0.063
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 310 LLTLRLL-LGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFL 368
LLTL LL LG L+WT +++P + L S T+ +LR L P L L+ +G L
Sbjct: 300 LLTLPLLFLGLSLLWTV----LLDPGAVSAWLWSLTSETTLRRLRYTLSPLLELRANGLL 355
Query: 369 P 369
P
Sbjct: 356 P 356
>gi|169215514 PREDICTED: hypothetical protein [Homo sapiens]
Length = 357
Score = 35.8 bits (81), Expect = 0.063
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 310 LLTLRLL-LGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFL 368
LLTL LL LG L+WT +++P + L S T+ +LR L P L L+ +G L
Sbjct: 300 LLTLPLLFLGLSLLWTV----LLDPGAVSAWLWSLTSETTLRRLRYTLSPLLELRANGLL 355
Query: 369 P 369
P
Sbjct: 356 P 356
>gi|169215483 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 356
Score = 35.8 bits (81), Expect = 0.063
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 310 LLTLRLL-LGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFL 368
LLTL LL LG L+WT +++P + L S T+ +LR L P L L+ +G L
Sbjct: 299 LLTLPLLFLGLSLLWTV----LLDPGAVSAWLWSLTSETTLRRLRYTLSPLLELRANGLL 354
Query: 369 P 369
P
Sbjct: 355 P 355
>gi|228008410 BEN domain containing 4 isoform b [Homo sapiens]
Length = 441
Score = 35.8 bits (81), Expect = 0.063
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 21 SFGWVDSSAAAPENHLACSGHCFCRGMVPSGGETGNCTTA----PTGSTVRLEEQS---- 72
SF + S+A+ HLA + GG T T+ P+ ST+ EE+
Sbjct: 261 SFPTPNPSSASEYGHLADVDPLSTSPVHTLGGWTSPATSESHGHPSSSTLPEEEEEEDEE 320
Query: 73 -----FLQLEQENHSLKRQNQELREQLGALLGPGQ---QFLPLCPEHSSCTALAWPPD-- 122
+LEQE SL+++N+ELR +L ++ P Q +L + +H + + P D
Sbjct: 321 GYCPRCQELEQEVISLQQENEELRRKLESIPVPCQTVLDYLKMVLQHHNQLLIPQPADQP 380
Query: 123 PAGTQPLGNRAPLQLLRRE 141
G++ L N P+ + ++
Sbjct: 381 TEGSKQLLNNYPVYITSKQ 399
>gi|148762950 BEN domain containing 4 isoform a [Homo sapiens]
Length = 534
Score = 35.8 bits (81), Expect = 0.063
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 21 SFGWVDSSAAAPENHLACSGHCFCRGMVPSGGETGNCTTA----PTGSTVRLEEQS---- 72
SF + S+A+ HLA + GG T T+ P+ ST+ EE+
Sbjct: 261 SFPTPNPSSASEYGHLADVDPLSTSPVHTLGGWTSPATSESHGHPSSSTLPEEEEEEDEE 320
Query: 73 -----FLQLEQENHSLKRQNQELREQLGALLGPGQ---QFLPLCPEHSSCTALAWPPD-- 122
+LEQE SL+++N+ELR +L ++ P Q +L + +H + + P D
Sbjct: 321 GYCPRCQELEQEVISLQQENEELRRKLESIPVPCQTVLDYLKMVLQHHNQLLIPQPADQP 380
Query: 123 PAGTQPLGNRAPLQLLRRE 141
G++ L N P+ + ++
Sbjct: 381 TEGSKQLLNNYPVYITSKQ 399
>gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo
sapiens]
Length = 817
Score = 35.4 bits (80), Expect = 0.083
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 199 PADAAQAHPGPHPQNELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLNLKKDI 257
PA +AQ P PHP + LQ+ R FER D A L + GL + K D+
Sbjct: 128 PAPSAQPAPPPHPPSRLQETRKLFERSAPAAAG-GDKEAAARRLLRQERAGLQDRKLDV 185
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 34.7 bits (78), Expect = 0.14
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 212 QNELQQIRLCFER----KKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGVLDQMEDI 267
Q E++++R E+ +K+ E+ D +E L+ Q T L+N KK + + QM+
Sbjct: 1688 QAEIEELRATLEQTERSRKIAEQELLD-ASERVQLLHTQNTSLINTKKKLETDISQMQGE 1746
Query: 268 QLEILRERAQCRTRARKEKQMASM 291
+IL+E +A+K A+M
Sbjct: 1747 MEDILQEARNAEEKAKKAITDAAM 1770
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 34.7 bits (78), Expect = 0.14
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 212 QNELQQIRLCFER----KKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGVLDQMEDI 267
Q E++++R E+ +K+ E+ D +E L+ Q T L+N KK + + QM+
Sbjct: 1688 QAEIEELRATLEQTERSRKIAEQELLD-ASERVQLLHTQNTSLINTKKKLETDISQMQGE 1746
Query: 268 QLEILRERAQCRTRARKEKQMASM 291
+IL+E +A+K A+M
Sbjct: 1747 MEDILQEARNAEEKAKKAITDAAM 1770
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 34.7 bits (78), Expect = 0.14
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 212 QNELQQIRLCFER----KKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGVLDQMEDI 267
Q E++++R ER +KM E+ D +E L+ Q T L+N KK + + Q++
Sbjct: 1686 QAEVEELRASLERTERGRKMAEQELLD-ASERVQLLHTQNTSLINTKKKLETDISQIQGE 1744
Query: 268 QLEILRERAQCRTRARKEKQMASM 291
+I++E +A+K A+M
Sbjct: 1745 MEDIVQEARNAEEKAKKAITDAAM 1768
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 214 ELQQIRLCFER----KKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGVLDQMEDIQL 269
EL+++R E+ +++ E+ + +++ L++Q TGLLN KK + L Q+
Sbjct: 1733 ELEELRAALEQGERSRRLAEQELLEATERLNL-LHSQNTGLLNQKKKLEADLAQLSGEVE 1791
Query: 270 EILRERAQCRTRARKEKQMASM 291
E +ER + +A+K A+M
Sbjct: 1792 EAAQERREAEEKAKKAITDAAM 1813
>gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 33.9 bits (76), Expect = 0.24
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 151 QQSQVGLGEGLWGGRKL--RNSTPGGP-EGFIREGGLRAVGQWAQRGGTGHPADAAQAHP 207
Q+ Q G G G WG L RN TP P G RE G W GG G P + P
Sbjct: 155 QRGQEGAGTG-WGDATLSRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEGNRRLRP 213
Query: 208 GP 209
P
Sbjct: 214 PP 215
>gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 33.9 bits (76), Expect = 0.24
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 151 QQSQVGLGEGLWGGRKL--RNSTPGGP-EGFIREGGLRAVGQWAQRGGTGHPADAAQAHP 207
Q+ Q G G G WG L RN TP P G RE G W GG G P + P
Sbjct: 155 QRGQEGAGTG-WGDATLSRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEGNRRLRP 213
Query: 208 GP 209
P
Sbjct: 214 PP 215
>gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 33.9 bits (76), Expect = 0.24
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 151 QQSQVGLGEGLWGGRKL--RNSTPGGP-EGFIREGGLRAVGQWAQRGGTGHPADAAQAHP 207
Q+ Q G G G WG L RN TP P G RE G W GG G P + P
Sbjct: 155 QRGQEGAGTG-WGDATLSRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEGNRRLRP 213
Query: 208 GP 209
P
Sbjct: 214 PP 215
>gi|222446616 hypothetical protein LOC341346 [Homo sapiens]
Length = 343
Score = 33.5 bits (75), Expect = 0.31
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 310 LLTLRLLLGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFLP 369
+LT+ LL +L + A ++ FE ++ +L T W LR + +PFL L+V+ LP
Sbjct: 290 VLTVTGLLCYILFFGATFL-------FERVLLRMLGCRTTWDLREMREPFLNLEVEALLP 342
>gi|239754510 PREDICTED: similar to hCG1644697 [Homo sapiens]
Length = 194
Score = 33.1 bits (74), Expect = 0.41
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 119 WPPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGF 178
W P P PLG +A C+ GLG GL GGR ++ GF
Sbjct: 17 WTPAPQLWFPLGIQA------LSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSGF 70
Query: 179 IREGGLRAVGQWAQRGGTGHPADAAQAH 206
+ G R G+ G GHP + H
Sbjct: 71 VSFRGSRLTGERKGVGTEGHPGFYERRH 98
>gi|239749071 PREDICTED: similar to hCG1644697 [Homo sapiens]
Length = 194
Score = 33.1 bits (74), Expect = 0.41
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 119 WPPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGF 178
W P P PLG +A C+ GLG GL GGR ++ GF
Sbjct: 17 WTPAPQLWFPLGIQA------LSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSGF 70
Query: 179 IREGGLRAVGQWAQRGGTGHPADAAQAH 206
+ G R G+ G GHP + H
Sbjct: 71 VSFRGSRLTGERKGVGTEGHPGFYERRH 98
>gi|239743097 PREDICTED: similar to hCG1644697 [Homo sapiens]
Length = 194
Score = 33.1 bits (74), Expect = 0.41
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 119 WPPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGF 178
W P P PLG +A C+ GLG GL GGR ++ GF
Sbjct: 17 WTPAPQLWFPLGIQA------LSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSGF 70
Query: 179 IREGGLRAVGQWAQRGGTGHPADAAQAH 206
+ G R G+ G GHP + H
Sbjct: 71 VSFRGSRLTGERKGVGTEGHPGFYERRH 98
>gi|239508749 PREDICTED: similar to hCG1644697 [Homo sapiens]
Length = 194
Score = 33.1 bits (74), Expect = 0.41
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 119 WPPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGF 178
W P P PLG +A C+ GLG GL GGR ++ GF
Sbjct: 17 WTPAPQLWFPLGIQA------LSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSGF 70
Query: 179 IREGGLRAVGQWAQRGGTGHPADAAQAH 206
+ G R G+ G GHP + H
Sbjct: 71 VSFRGSRLTGERKGVGTEGHPGFYERRH 98
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 33.1 bits (74), Expect = 0.41
Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 29/154 (18%)
Query: 58 TTAPTGSTVRLEEQSFLQLEQENHSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTAL 117
T P + EE+ + LE+ + ++ ++ + G G +Q S C L
Sbjct: 178 TWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDKGDPEGPEAGGAEQ-----KAASGCERL 232
Query: 118 AWPPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEG 177
PP PAG + G+ + F + G + L G + +P GP
Sbjct: 233 QGPPTPAGKETEGSLS------------DSDFKEPPSEGRLDALQGPPRTGGPSPAGP-- 278
Query: 178 FIREGGLRAVGQWAQRGGTGHPADAAQAHPGPHP 211
A + A+ +PA A PGPHP
Sbjct: 279 --------AAARLAEDPAPHYPAGAPA--PGPHP 302
>gi|55741447 pleckstrin homology domain containing, family H (with
MyTH4 domain) member 1 [Homo sapiens]
Length = 1364
Score = 32.7 bits (73), Expect = 0.54
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 75 QLEQENHSLKRQNQELREQLGAL--------LGPGQQFLPLCPEHSSCTALAWPPDPAGT 126
+LE EN LK NQ L EQ+G+L + P ++ L P + + + P +P G
Sbjct: 141 KLEMENQHLKSHNQRLVEQVGSLQDALEAIQIAPSRKL--LVPPYGAAEQDSVPSEP-GI 197
Query: 127 QPLG 130
QP+G
Sbjct: 198 QPMG 201
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 32.3 bits (72), Expect = 0.70
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 212 QNELQQIRLCFER----KKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGVLDQMEDI 267
Q E++++R E+ +K+ E+ D +E L+ Q T L+N KK + + Q++
Sbjct: 1686 QAEIEELRATLEQTERSRKIAEQELLD-ASERVQLLHTQNTSLINTKKKLETDISQIQGE 1744
Query: 268 QLEILRERAQCRTRARKEKQMASM 291
+I++E +A+K A+M
Sbjct: 1745 MEDIIQEARNAEEKAKKAITDAAM 1768
>gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo
sapiens]
Length = 338
Score = 31.6 bits (70), Expect = 1.2
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 18/57 (31%)
Query: 120 PPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPE 176
PP A QP Q +RR+LC+ Q G G WGG ++ N PG PE
Sbjct: 161 PPASASAQP-------QSVRRQLCRAQT----------GSG-WGGPQVLNLVPGEPE 199
>gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo
sapiens]
Length = 338
Score = 31.6 bits (70), Expect = 1.2
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 18/57 (31%)
Query: 120 PPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPE 176
PP A QP Q +RR+LC+ Q G G WGG ++ N PG PE
Sbjct: 161 PPASASAQP-------QSVRRQLCRAQT----------GSG-WGGPQVLNLVPGEPE 199
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,728,207
Number of Sequences: 37866
Number of extensions: 883622
Number of successful extensions: 3447
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 3373
Number of HSP's gapped (non-prelim): 110
length of query: 370
length of database: 18,247,518
effective HSP length: 104
effective length of query: 266
effective length of database: 14,309,454
effective search space: 3806314764
effective search space used: 3806314764
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.