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Search of human proteins with 11276081
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
(801 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11276081 protocadherin beta 8 precursor [Homo sapiens] 1574 0.0
gi|11036654 protocadherin beta 13 precursor [Homo sapiens] 1440 0.0
gi|14195605 protocadherin beta 16 precursor [Homo sapiens] 1203 0.0
gi|9256614 protocadherin beta 3 precursor [Homo sapiens] 1201 0.0
gi|9256610 protocadherin beta 15 precursor [Homo sapiens] 1174 0.0
gi|9256612 protocadherin beta 2 precursor [Homo sapiens] 1167 0.0
gi|9256608 protocadherin beta 14 precursor [Homo sapiens] 1165 0.0
gi|9256604 protocadherin beta 11 precursor [Homo sapiens] 1158 0.0
gi|9256616 protocadherin beta 4 precursor [Homo sapiens] 1153 0.0
gi|7661662 protocadherin beta 5 precursor [Homo sapiens] 1152 0.0
gi|9256618 protocadherin beta 6 precursor [Homo sapiens] 1148 0.0
gi|9256602 protocadherin beta 10 precursor [Homo sapiens] 1145 0.0
gi|9256606 protocadherin beta 12 precursor [Homo sapiens] 1140 0.0
gi|14195616 protocadherin beta 9 precursor [Homo sapiens] 1133 0.0
gi|11036656 protocadherin beta 7 precursor [Homo sapiens] 1126 0.0
gi|14195607 protocadherin beta 1 precursor [Homo sapiens] 779 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 654 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 654 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 650 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 650 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 648 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 648 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 646 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 646 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 645 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 645 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 643 0.0
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs... 643 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 642 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 642 0.0
>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
Length = 801
Score = 1574 bits (4075), Expect = 0.0
Identities = 801/801 (100%), Positives = 801/801 (100%)
Query: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
Query: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
Query: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG
Sbjct: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
Query: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN
Sbjct: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
Query: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD
Sbjct: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
Query: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP
Sbjct: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
Query: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
Query: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH
Sbjct: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
Query: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA
Sbjct: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
Query: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF
Sbjct: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
Query: 781 GPEMEQNSNFRNGFGFSLQLK 801
GPEMEQNSNFRNGFGFSLQLK
Sbjct: 781 GPEMEQNSNFRNGFGFSLQLK 801
>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
Length = 798
Score = 1440 bits (3728), Expect = 0.0
Identities = 734/799 (91%), Positives = 758/799 (94%), Gaps = 1/799 (0%)
Query: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
ELQVIDINDHSPVFLDKQMLVKVSESSPPGT FPLKNAEDLD+GQNNIENYIISPNSYFR
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
Query: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
VLTRKRSDGRKYPELVLD ALDREEEAELRLTLTALDGGSPPRSGTAQVYIEV+DVNDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
Query: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
PEF+QPFYRVQISEDSP+ FLVVKVSATDVDTGVNGEISYSLFQAS+EI KTFK++ LTG
Sbjct: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
Query: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
EI LKKQLDFEK QSYEVNIEARDAG FSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN
Sbjct: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKS+ NFYTLLTE PLDRESRAEYN+
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSA-ENFYTLLTERPLDRESRAEYNI 419
Query: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
TITVTDLGTP L T LNMTVL++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
Query: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
SGTNAQVTYSLLPPQDPHLPL SLVSIN DNGHLFALRSLDYEALQ F+FRVGASD GSP
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
Query: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH
Sbjct: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
Query: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
+LLVDGFSQPYLPLPEAAP Q QAD LTVYLVVALASVSSLFLFSVLLFVAV LCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
Query: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
ASVGRC VPEGP PGHLVD+ GT +LSQ+YQYEVCLAGGSGTNEF+FLKP++PN
Sbjct: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
Query: 781 GPEMEQNSNFRNGFGFSLQ 799
G E++ NS F N FGF++Q
Sbjct: 780 GKEIQGNSTFPNNFGFNIQ 798
>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
Length = 776
Score = 1203 bits (3112), Expect = 0.0
Identities = 607/765 (79%), Positives = 676/765 (88%), Gaps = 1/765 (0%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
RQRQVL F+LL LS AGA E SYSVVEETE SFV NL KDLGL E S R R++S
Sbjct: 10 RQRQVLVFFVLLSLSGAGA-ELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIIS 68
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
+GNK HLQL +T DLL+NEKLDRE+LCG TEPC+L FQVL+E+P E FQAEL+VIDIND
Sbjct: 69 QGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDIND 128
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
HSP+F +K+M++K+ E+SP GT FPL +A DLD+G NN++NY ISP+S+FRVL + DG
Sbjct: 129 HSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDG 188
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
RKYPELVLD LDREEE +LRLTLTALDGGSPPRSGTAQV IEVVD+NDNAPEF+QP Y+
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYK 248
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
VQI E+SP+ LV VSA D+D G NG+ISY+LFQ S++ISKT +V+ +TGE+RL+KQ+D
Sbjct: 249 VQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVD 308
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
FE SYEV I+A D GG SGKCT+L+QV+DVND+ P+VTMSA TSPIPEN+PE VVA+F
Sbjct: 309 FEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVF 368
Query: 370 SVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGT 429
SVSD DSG NGK SIQEDLPFLLK SV NFYTL+TE LDRE+RAEYN+T+TVTD+GT
Sbjct: 369 SVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGT 428
Query: 430 PRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489
PRL T N+TV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 429 PRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 490 SLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVR 549
SLLPPQDPHLPLASLVSIN DNGHLFALRSLDYEAL+ FEFRV A+DRGSPALSSEALVR
Sbjct: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVR 548
Query: 550 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 609
VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
Query: 610 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQ 669
ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPP SATATLH+LLVDGFSQ
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
Query: 670 PYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVP 729
P+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRAASVGRCS+P
Sbjct: 669 PFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMP 728
Query: 730 EGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPN 774
EGPFPG LVDV GTG+LSQ+YQYEVCL GGS T+EF+FLKP++PN
Sbjct: 729 EGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPN 773
>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
Length = 796
Score = 1201 bits (3106), Expect = 0.0
Identities = 598/797 (75%), Positives = 686/797 (86%), Gaps = 1/797 (0%)
Query: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
MEA G+ RQRQVL F+ LG SLAG+ E R YSV EE E + NLAKDLGL E
Sbjct: 1 MEAGGERFLRQRQVLLLFVFLGGSLAGS-ESRRYSVAEEKEKGFLIANLAKDLGLRVEEL 59
Query: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
+ RG +VVS+GNK H QL+ +T DLLLNEKLDRE+LCG TEPC+L FQ+LL++P +F
Sbjct: 60 AARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTN 119
Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
EL++ID+NDHSPVF + +M +K+ ES+ PGT PL NAEDLD+G+N+++NY I+PNS+F
Sbjct: 120 ELRIIDVNDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFH 179
Query: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
VLTR R DGRKYPELVLD ALDREE+ EL LTLTALDGGSPPRSGTAQ+ I+V+D+NDNA
Sbjct: 180 VLTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNA 239
Query: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
PEF QP Y V + E++P++ ++V VSA+D+DTG G ISY+ F AS+EI KTF+++ +TG
Sbjct: 240 PEFAQPLYEVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITG 299
Query: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
+++L K L+FE SYEV+IEA+D GG SGK TV++QV+DVND+ PE+T+S+ SPIPEN
Sbjct: 300 DMQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPEN 359
Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
+ ETV+A+FSVSDLDSG+NG++ CSI+ +LPF LK SV NFYTL++E LDRE+R+EYN+
Sbjct: 360 SGETVLAVFSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNI 419
Query: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
TIT+TDLGTPRL T N+TVLVSDVNDNAPAFTQ SYTLFVRENNSPALHIGSVSATDRD
Sbjct: 420 TITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRD 479
Query: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
SGTNAQVTYSLLPPQDPHLPL+SLVSIN DNGHLFALRSLDYEALQAFEFRVGA+DRGSP
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSP 539
Query: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
Query: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
+LLVDGFSQPYLPLPEAAPAQ QAD LTVYLVVALASVSSLFLFSVLLFVAV LCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
Query: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
ASVGRCSVPEGPFPG +VDV GTG+LSQ+YQYEVCL GGSGTNEF+FLKP++PN
Sbjct: 720 ASVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGA 779
Query: 781 GPEMEQNSNFRNGFGFS 797
E N +FR F FS
Sbjct: 780 ERVSEANPSFRKSFEFS 796
>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
Length = 787
Score = 1174 bits (3038), Expect = 0.0
Identities = 594/775 (76%), Positives = 665/775 (85%), Gaps = 1/775 (0%)
Query: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
ME +G+ QRQVL LLL ++LAG EPR YSV+EETE SFV NLA DLGL E
Sbjct: 1 MEPAGERFPEQRQVLILLLLLEVTLAGW-EPRRYSVMEETERGSFVANLANDLGLGVGEL 59
Query: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
+ RG RVVS N+ LQL+ +T L+LNEKLDRE LCG TEPC++ FQVLL+ P E F+A
Sbjct: 60 AERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRA 119
Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
EL V DINDHSP F +++M +K+ E+S GT FPLK A DLD+G NN++NY ISPNS+F
Sbjct: 120 ELLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFH 179
Query: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
V TR R DGRKYPELVLD LDREE+AELRLTLTA+DGGSPPRSGT Q+ I V+D NDNA
Sbjct: 180 VSTRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNA 239
Query: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
PEF Q Y VQ+ E+SP+ LVVKVSA D+DTG NGEISYSL+ +S EI K F++ L+G
Sbjct: 240 PEFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSG 299
Query: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
EIRL K+LDFE SY+++IEA D GG SGKC+V ++V+DVND+ PE+++S+ TSPIPEN
Sbjct: 300 EIRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPEN 359
Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
+PET VALF + D DSGENGK+ CSIQ+D+PF LK SV NFY L+TE LDRE+RAEYN+
Sbjct: 360 SPETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNI 419
Query: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
TIT+TDLGTPRL T ++TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD
Sbjct: 420 TITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479
Query: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
SGTNAQVTYSLLPP+DPHLPL SLVSINTDNGHLFAL+SLDYEALQAFEFRVGA+DRG P
Sbjct: 480 SGTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFP 539
Query: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AK RLVVLVKDNGEPP SATATL
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQ 659
Query: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
+LLVDGFSQPYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSV LFVAV LCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRA 719
Query: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNI 775
ASVGRCSVPEGPFPGHLVDV GTG+LSQ+YQYEVCL GGS +N+F+FLKP+ PNI
Sbjct: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNI 774
>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
Length = 798
Score = 1167 bits (3018), Expect = 0.0
Identities = 587/788 (74%), Positives = 669/788 (84%), Gaps = 1/788 (0%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
+QRQVL F+LLG++ A + +PR YSV EETE SFV NL KDLGLE E + RG RVVS
Sbjct: 12 KQRQVLIFFVLLGIAQA-SCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARVVS 70
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
+G K+HLQ +++T DLLLNEKLDRE+LCG TEPCVL FQVLLE+P +FFQAEL++ D+ND
Sbjct: 71 KGKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDVND 130
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
HSPVFLDK++L+K+ ES PGT F ++ A+DLD+G N+++NY ISPN +F + + DG
Sbjct: 131 HSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSLDG 190
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
P+LVL+ ALDREE+ E+RLTLTALDGGSPPRSGTA V IEVVD+NDN PEF + Y
Sbjct: 191 IILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLLYE 250
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
VQI EDSP+ V VSA D+D G NGEISY+ QAS++I KTF++ +GE+ L+++LD
Sbjct: 251 VQIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQKLD 310
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
FE Q+Y VNI+A D GG SG C V +QV+D+ND+ PE+TMS + IPEN +T++A+F
Sbjct: 311 FESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIAVF 370
Query: 370 SVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGT 429
SVSD DSG+NG++ CSIQ+DLPF LK SV NFYTL+ T LDRE+R+EYN+TITVTD GT
Sbjct: 371 SVSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDFGT 430
Query: 430 PRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489
PRL T N+TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 431 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 490
Query: 490 SLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVR 549
SLLPPQDPHLPLASLVSIN DNGHLFAL+SLDYEALQAFEFRVGA+DRGSPALSSEALVR
Sbjct: 491 SLLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEALVR 550
Query: 550 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 609
VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 551 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 610
Query: 610 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQ 669
ATEPGLFGVWAHNGEVRTARLL ERDAAKQRLVVLVKDNGEPP SATATLH+LLVDGFSQ
Sbjct: 611 ATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 670
Query: 670 PYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVP 729
PYL LPEAAPAQ QAD LTVYLVVALASVSSLFLFSVLLFVAV LCRRSRAASVGRCSVP
Sbjct: 671 PYLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVP 730
Query: 730 EGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSFGPEMEQNSN 789
EGPFPG +VDV GTG+LSQ+YQYEVCL GGSGTNEF+FLKP++PN E N +
Sbjct: 731 EGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEANPS 790
Query: 790 FRNGFGFS 797
FR F F+
Sbjct: 791 FRKSFEFT 798
>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
Length = 798
Score = 1165 bits (3015), Expect = 0.0
Identities = 587/799 (73%), Positives = 672/799 (84%), Gaps = 1/799 (0%)
Query: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
ME G L R+RQVL +LLGLS AG E YSV EETE SFV NLA+DLGL E
Sbjct: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGT-ESAHYSVAEETEIGSFVANLARDLGLGVEEL 59
Query: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
S R RVVS NK +L L+ T +LLLNEKLDR++LCG TEPCVL FQV+LE+P +FF+
Sbjct: 60 SSREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRF 119
Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
EL V DINDHSP FLDK++L+K+SE + G F +++A+DLD+G N+++NY ISPNS+F
Sbjct: 120 ELCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFY 179
Query: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
+ SD + YPELVLD ALD E+EAELRLTLTA+DGGSPP+SGT V I+V+D+NDNA
Sbjct: 180 IKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNA 239
Query: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
PEF Q Y VQ+ ED P+ + +SA D+D G G+ISY+ F AS++I KTF+++ ++G
Sbjct: 240 PEFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISG 299
Query: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
E+ L+ LDFE QSY +NI+A D GG SGKCT+L++V+D+ND+ PEVT+S+ T IPEN
Sbjct: 300 EVNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPEN 359
Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
A ET+VALFS+ D DSG+NG++ CSIQ++LPF LK + NF+TL++E LDRES+AEYN+
Sbjct: 360 ASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNI 419
Query: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
TITVTDLGTPRL T N+TVL+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRD
Sbjct: 420 TITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
Query: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
SGTNAQV YSLLPPQD HLPLASLVSIN DNGHLFALRSLDYEALQ FEFRVGA+DRGSP
Sbjct: 480 SGTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSP 539
Query: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
Query: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
+LLVDGFSQPYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
Query: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
ASVGRCSVPEGPFPGHLVDV GTG+LSQ+YQYEVCL GGSGTNEF+FLKP++PN Q H
Sbjct: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDT 779
Query: 781 GPEMEQNSNFRNGFGFSLQ 799
G M + NFRN FG ++Q
Sbjct: 780 GRNMGEIENFRNSFGLNIQ 798
>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
Length = 797
Score = 1158 bits (2995), Expect = 0.0
Identities = 592/797 (74%), Positives = 667/797 (83%), Gaps = 1/797 (0%)
Query: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
ME G + RQVL F+LLG+S AG+ E S+SV EE + SFV NLAKDLGL+ RE
Sbjct: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGS-ETWSFSVAEEMQSGSFVGNLAKDLGLKVREL 59
Query: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
S RG RVVS K LQL+ T DLLL+E LDRE+LCG EPCVL QVL+++P +F Q
Sbjct: 60 SSRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQI 119
Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
ELQV DINDHSP+F +KQML+++ E+SP G F L++A+DLD+G N +++Y ISPNS+F
Sbjct: 120 ELQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFH 179
Query: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
+ R D RKYPELVLD ALD EE EL L+ALDGGSPPRSGTA V + VVD+NDN+
Sbjct: 180 IKMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNS 239
Query: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
PEF+Q FY V+I E+S + L++ VSA D+D+G NGEI Y+ AS++I KTF+++ +G
Sbjct: 240 PEFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSG 299
Query: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
EI L+ LDFE +SY + I+A D GG GK TV+I VIDVND+APE+T+S+ TSPIPEN
Sbjct: 300 EITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN 359
Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
PETVV +FS+ D+DSG+NG+I CSI EDLPF+LKSSV N+YTL TE PLDRES AEYN+
Sbjct: 360 TPETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNI 419
Query: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
TITVTDLG PRL T N TVLVSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRD
Sbjct: 420 TITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
Query: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
SGTNAQV YSLLPPQD HLPLASLVSINTDNGHLFALRSLDYEALQAF+FRVGA+DRGSP
Sbjct: 480 SGTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSP 539
Query: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATL
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQ 659
Query: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
+LLVDGFSQPYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
Query: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
ASVG CSVP+GPFPGHLVDV GTG+LSQ+YQYEVCL GGS TNEF+FLKPV+PNIQ
Sbjct: 720 ASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGL 779
Query: 781 GPEMEQNSNFRNGFGFS 797
G E+NS FRN FGF+
Sbjct: 780 GKNSEENSTFRNSFGFN 796
>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
Length = 795
Score = 1153 bits (2982), Expect = 0.0
Identities = 584/786 (74%), Positives = 659/786 (83%), Gaps = 1/786 (0%)
Query: 12 RQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRG 71
RQVL L++ LS EP YSV+EETE SFV +LAKDLGL E + R RV+S
Sbjct: 11 RQVLAFILMVFLSQV-RLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSARVLSDD 69
Query: 72 NKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHS 131
+K LQL+++T DLLL EKLDRE+LCG EPCVL FQV LE P +FFQ EL + DINDHS
Sbjct: 70 DKQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQDINDHS 129
Query: 132 PVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDGRK 191
P+F ++++L+K+ E+S PGT FPL AEDLD+G N ++ Y ISPNS+F +LTR S+G+K
Sbjct: 130 PIFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRNHSEGKK 189
Query: 192 YPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYRVQ 251
YP+LV D LDREE+ E LTL ALDGGSPPRSGT V I ++D+NDNAPEF Y VQ
Sbjct: 190 YPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQ 249
Query: 252 ISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFE 311
+ E+SP+ +V+V A D+D G G +SY LFQASDEI +TF ++ +TGEI LKK+LDFE
Sbjct: 250 VLENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLKKKLDFE 309
Query: 312 KFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALFSV 371
K +SY V IEA D GG SGK TV+I+V+DVND+ PE+ +S+ TS IPENAPETVV++F +
Sbjct: 310 KIKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPETVVSIFRI 369
Query: 372 SDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGTPR 431
D DSGENGK+ CSI ++LPF+LK ++ NFYTL+TE PLDRE+ AEYN+TI VTDLGTPR
Sbjct: 370 RDRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTPR 429
Query: 432 LTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 491
L T N+TV VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL
Sbjct: 430 LKTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 489
Query: 492 LPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVL 551
LPPQDPHLPLASLVSIN DNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVL
Sbjct: 490 LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVL 549
Query: 552 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 611
VLD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT
Sbjct: 550 VLDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 609
Query: 612 EPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQPY 671
EPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH+LLVDGFSQPY
Sbjct: 610 EPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 669
Query: 672 LPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVPEG 731
LPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRAASVGRCSVPEG
Sbjct: 670 LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEG 729
Query: 732 PFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSFGPEMEQNSNFR 791
PFPGHLVDV GTG+LSQ+YQYEVCL G SGT EF+FLKP+ PN+ G E+++N FR
Sbjct: 730 PFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGREVKENPKFR 789
Query: 792 NGFGFS 797
N FS
Sbjct: 790 NSLVFS 795
>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
Length = 795
Score = 1152 bits (2980), Expect = 0.0
Identities = 587/788 (74%), Positives = 663/788 (84%), Gaps = 2/788 (0%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
++RQV+F +LL L AG+ R YS+ EETE V NLAKDLGL E + RG R+
Sbjct: 10 QKRQVMFLAILLLLWEAGSEAVR-YSIPEETESGYSVANLAKDLGLGVGELATRGARMHY 68
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
+GNK LQL+ +T +LLL EKLDRE +CG TEPC+L FQ+LLE+P +FFQ +LQ+ DIND
Sbjct: 69 KGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDIND 128
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
H+P F +K+ML+K+ ES+ PGT FPLK A+D DIG N ++NY ISPNS+F V T R DG
Sbjct: 129 HAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDG 188
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
RKYPELVLD ALDREE EL LTLTALDGG+PPRSGT + I V+D NDNAPEF Q FY
Sbjct: 189 RKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYE 248
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
VQ+ E+SP++ LVV VSA D+D G G ++Y+LFQ DE+++ F +D T EIRLK+ LD
Sbjct: 249 VQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQG-DEVTQPFVIDEKTAEIRLKRALD 307
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
FE Y V I A D GG SGKCTV I+V+DVND+APE+TMS +SP PENAPETVVA+F
Sbjct: 308 FEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVAVF 367
Query: 370 SVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGT 429
SVSD DSG+NG++ CSIQ DLPFLLK ++ NFYTL+T+ LDRES+AEYN+TITVTD+GT
Sbjct: 368 SVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGT 427
Query: 430 PRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489
PRL T N+TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 428 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 487
Query: 490 SLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVR 549
SLLPPQ+PHL LASLVSIN DNGHLFALRSLDYEALQAFEFRVGA+DRGSPALSSEALVR
Sbjct: 488 SLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVR 547
Query: 550 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 609
VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 548 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 607
Query: 610 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQ 669
ATEPGLF +WAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH+LLVDGFSQ
Sbjct: 608 ATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 667
Query: 670 PYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVP 729
PYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRAASVGRCSVP
Sbjct: 668 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVP 727
Query: 730 EGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSFGPEMEQNSN 789
EGPFPGHLVDV GTG+LSQ+Y YEVCL G SG EF+FLKP++PN+ G E+ + +
Sbjct: 728 EGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKTAA 787
Query: 790 FRNGFGFS 797
FRN FG +
Sbjct: 788 FRNSFGLN 795
>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
Length = 794
Score = 1148 bits (2970), Expect = 0.0
Identities = 580/788 (73%), Positives = 666/788 (84%), Gaps = 2/788 (0%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
++RQV F F+LL L +E YSV+EETE +FV NL KDLGL E + RG RVV
Sbjct: 9 KKRQVAF-FILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVF 67
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
+GN+ HLQ + +T DLLLNEKLDRE+LCG TEPCVL FQVLLE+P +FFQA L+V DIND
Sbjct: 68 KGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDIND 127
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
H+P F ++ML+K+SE + PG FPLK A DLD G N ++ Y IS N +F VLTR RS+G
Sbjct: 128 HAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEG 187
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
RK+PELVLD LDREE+ +LRLTL ALDGGSPPRSGT+++ I+V+D+NDN PEF Q Y
Sbjct: 188 RKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYE 247
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
Q+ E++P+ LV+ VSA D+D G G++SY+LFQ D++++ F+++ +TGEIRL+K LD
Sbjct: 248 AQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALD 306
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
FE+ QSY+V++EA D GG SGKC+++++V+DVND+APE+TMS F S IPEN PE VA+F
Sbjct: 307 FEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVF 366
Query: 370 SVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGT 429
SVSD DSG N ++ CSI+ +LPFLL+ SV NFYTL+TE LDRESRAEYN+TITVTDLGT
Sbjct: 367 SVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGT 426
Query: 430 PRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489
PRL T ++TV VSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTY
Sbjct: 427 PRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTY 486
Query: 490 SLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVR 549
SLLPPQDPHLPL+SLVSIN DNGHLFALRSLDYEALQ+FEFRVGA+DRGSPALSSEALVR
Sbjct: 487 SLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVR 546
Query: 550 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 609
+LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 547 LLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 606
Query: 610 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQ 669
ATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH+LLVDGFSQ
Sbjct: 607 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 666
Query: 670 PYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVP 729
PYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRAASVGR SVP
Sbjct: 667 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVP 726
Query: 730 EGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSFGPEMEQNSN 789
EGPFPGHLVDV GTG+LSQ+YQY+VCL GGS TNEF+FLKP++PN EME+
Sbjct: 727 EGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPT 786
Query: 790 FRNGFGFS 797
RN F FS
Sbjct: 787 SRNSFPFS 794
>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
Length = 800
Score = 1145 bits (2963), Expect = 0.0
Identities = 585/792 (73%), Positives = 664/792 (83%), Gaps = 3/792 (0%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
RQRQVLF FL G+SLAG+ R YSV EETE SFV NLAKDLGL + E + RG RVVS
Sbjct: 10 RQRQVLFLFLFWGVSLAGSGFGR-YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVS 68
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
NK +L L+ T +LL NEKLDRE LCG EPC+L FQ+L++ PF+ ++AEL+V DIND
Sbjct: 69 DDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
H+PVF DK+ ++K+SE++ GTAF L+ A+D D G N I+NY ISPNS+F + +G
Sbjct: 129 HAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEG 188
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
YPELVLD ALDREE+ EL LTLTALDGGSP RSGT+ V I V+DVNDNAP+F Q Y
Sbjct: 189 MIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYE 248
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
Q E+SPI FL+VKV A DVD+GVN E+SYS F AS+ I TF+++ +GEI L++ LD
Sbjct: 249 TQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLD 308
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
+E SY++NI+A D GG S +C VL++V+D ND+ PE+ +S+F++ + EN+PET +A+F
Sbjct: 309 YELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVF 368
Query: 370 SVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGT 429
++D DSGENGK+ C IQE+LPFLLK SV NFY L+TE LDRE RAEYN+TITVTDLGT
Sbjct: 369 KINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGT 428
Query: 430 PRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489
PRL T N+TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 490 SLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVR 549
SLLPPQDPHLPLASLVSIN DNGHLFALRSLDYEALQAFEFRVGA+DRGSPALS EALVR
Sbjct: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVR 548
Query: 550 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 609
VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
Query: 610 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQ 669
ATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLHLLLVDGFSQ
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668
Query: 670 PYLPLPEAAPAQGQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCS 727
PYLPLPEAAPAQ Q AD LTVYLVVALASVSSLFL SVLLFVAV LCRRSRAASVGRCS
Sbjct: 669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCS 728
Query: 728 VPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSFGPEMEQN 787
VPEGPFPGHLVDVRG +LSQ+YQYEVCL GG GT+EF+FLKPV+ +IQ G + E+N
Sbjct: 729 VPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEEN 788
Query: 788 SNFRNGFGFSLQ 799
S FRN FGF++Q
Sbjct: 789 STFRNSFGFNIQ 800
>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
Length = 795
Score = 1140 bits (2949), Expect = 0.0
Identities = 582/796 (73%), Positives = 661/796 (83%), Gaps = 1/796 (0%)
Query: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
ME G + RQVL F+LLG+S AG+ E ++ V+EE + SFV NLAK LGLE E
Sbjct: 1 MENGGAGTLQIRQVLLFFVLLGMSQAGS-ETGNFLVMEELQSGSFVGNLAKTLGLEVSEL 59
Query: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
S RG RVVS NK LQL+ T DLLL E LDRE+LCG EPCVL FQVL+++P +F Q
Sbjct: 60 SSRGARVVSNDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQI 119
Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
ELQV DINDHSPVFL+K+ML+++ E+SP G F L++A+DLD+G N +++Y I+PNS+F
Sbjct: 120 ELQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFH 179
Query: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
V R D RKYPELVLD ALD EE EL LTALDGGSPPRSGTA V + VVD+NDN+
Sbjct: 180 VKIRVNPDNRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNS 239
Query: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
PEF+Q FY V+I E+S + LVV VSA D+D+G N E+SY+ AS++I KTF+++ +G
Sbjct: 240 PEFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSG 299
Query: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
+I L LDFE +SY + I+A D GG GK TV IQV+DVND+APE+T+S+ TSPIPEN
Sbjct: 300 DITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPEN 359
Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
PETVV +F + D DSG+NGK+ CSI ED+PF+LKSSV N+YTL TE PLDRESRAEYN+
Sbjct: 360 TPETVVMVFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNI 419
Query: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
TITVTDLGTPRL T N+TVLVSDVNDNAPAFTQTSY LFVRENNSPALHIGS+SATDRD
Sbjct: 420 TITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRD 479
Query: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
SGTNAQV YSLLP QDPHLPLASLVSIN DNGHLFALRSLDYEALQ F+FRVGA+D GSP
Sbjct: 480 SGTNAQVNYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSP 539
Query: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQN 599
Query: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
Query: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
+LLVDGFSQPYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
Query: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
A VGRCSVPEGPFPGHLVDV GTG+LSQ+Y YEVC+ GGS +N+F+FLKP++PN S
Sbjct: 720 APVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQST 779
Query: 781 GPEMEQNSNFRNGFGF 796
G E+E+N F+N GF
Sbjct: 780 GSEVEENPPFQNNLGF 795
>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
Length = 797
Score = 1133 bits (2931), Expect = 0.0
Identities = 575/797 (72%), Positives = 660/797 (82%), Gaps = 1/797 (0%)
Query: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
M+ G RQRQVLF FL G+SLAG+ R YSV EETE SFV NLAKDLGL + E
Sbjct: 1 MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGR-YSVTEETEKGSFVVNLAKDLGLAEGEL 59
Query: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
+ RG RVVS NK +L L+ T +LL NEKLDRE LCG EPC+L FQ+L++ PF+ ++A
Sbjct: 60 AARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRA 119
Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
EL+V DINDHSPVF K+M++K+SE++ GTAF L+ A+D D G N+I+NY IS NS+F
Sbjct: 120 ELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFH 179
Query: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
+ +G YPELVLD ALDREE+ EL LTLTALDGGSP RSGT+ + I V+DVNDNA
Sbjct: 180 IKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNA 239
Query: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
P+F Q Y Q E+SP+ L+VKVSA D D+GVN E+SYS F AS++I TF+++ +G
Sbjct: 240 PQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSG 299
Query: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
EI L++ LD+E SY++NI+A D GG S +CTVLI+V+D ND+ PE+ +S+ ++ + EN
Sbjct: 300 EIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAEN 359
Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
+P V+A+F + D DSGENGK C +Q++LPF LK SV NFY L+TE LDRES+AEYN+
Sbjct: 360 SPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNI 419
Query: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
TITVTDLGTPRL T ++T+ VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD
Sbjct: 420 TITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479
Query: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
SGTNAQVTYSLLPPQDPHLPLASLVSIN DNGHLFALRSLDYEALQAF+FRVGASDRGSP
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSP 539
Query: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
Query: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
+LLVDGFSQPYLPLPEAAPAQ QAD LTVYLVVALASVSSLFL SVLLFVAV LCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRA 719
Query: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
ASVGRCSVPEGPFPGHLVDV GTG+L Q+YQYEVCL GGS T EF+FLKP+ P++ H
Sbjct: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRG 779
Query: 781 GPEMEQNSNFRNGFGFS 797
G E+E+NS N FGF+
Sbjct: 780 GKEIEENSTLPNSFGFN 796
>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
Length = 793
Score = 1126 bits (2912), Expect = 0.0
Identities = 575/796 (72%), Positives = 658/796 (82%), Gaps = 3/796 (0%)
Query: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
MEA + ++RQVLF + LG+S AGA EP Y V EETE +F+TNLAKDLGL E
Sbjct: 1 MEARVERAVQKRQVLFLCVFLGMSWAGA-EPLRYFVAEETERGTFLTNLAKDLGLGVGEL 59
Query: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
RG R+VS N L L+ T DLLLNEKLDRE+LCG EPCVL FQ+LLE PF+ F+A
Sbjct: 60 RARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRA 119
Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
EL V DINDH+PVFLD+++ +K+ ES+ PG AF L++A+D D+G N++ NY ISPN+YF
Sbjct: 120 ELWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFH 179
Query: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
+ +G YPELVL+ LDREE E LTLTALDGGSPPRSGTA V I V+DVNDNA
Sbjct: 180 INVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNA 239
Query: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
P+F + Y+VQ+ E+SP+ +VV VSA D+DTG NGEI+Y+ A++ I KTF+++ +G
Sbjct: 240 PDFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSG 299
Query: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
+ LK QLD+E Q+Y + I+A+D GG SGKCTV++ V D+ND+ PE+ +S+ TSPI EN
Sbjct: 300 SLHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAEN 359
Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
+PETVVA+F + D DSG NGK CSIQ+D+PF+LK SV NFYTL+TE PLDRE EYN+
Sbjct: 360 SPETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNI 419
Query: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
TITVTDLGTPRL T N+TVLVSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRD
Sbjct: 420 TITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRD 479
Query: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
SGTNAQV YSLLP QDPHLPLASLVSIN DNGHLFALRSLDYEALQAFEFRVGA+DRGSP
Sbjct: 480 SGTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSP 539
Query: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
ALSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPP SATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLH 659
Query: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
+LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAV LCRRSRA
Sbjct: 660 VLLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRA 717
Query: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
A VGRCSVPEGPFP HLVD+ GTG+LSQ+YQYEVCL GGSGTNEF+FLKP++PN+ S
Sbjct: 718 APVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQST 777
Query: 781 GPEMEQNSNFRNGFGF 796
G E+E+N F+N GF
Sbjct: 778 GREVEENRPFQNNLGF 793
>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
Length = 818
Score = 779 bits (2012), Expect = 0.0
Identities = 398/798 (49%), Positives = 555/798 (69%), Gaps = 17/798 (2%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
+ RQV + L +S+ A R YSV EE E SFV N+AKDLGLE + + RG R+VS
Sbjct: 10 QNRQVGSLLIFLCISVGDATTIR-YSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVS 68
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
GNK+H +L+++T DL + EKLDRE LCG +PCVL F+V+L P + F+AE++V DIND
Sbjct: 69 EGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDIND 128
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
++PVFL+K+ L+K+ ES+P G+ FPL++A+DLD+G N ++NY +S N YF + TR S G
Sbjct: 129 NAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHG 188
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
KY ELVL+ LDREE+ E+ LT+TA+DGGSPP+SGTA +++ V+DVND+ P+F + YR
Sbjct: 189 PKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYR 248
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
Q+SE+SP LV V+A D+D G N I+YSL Q + I KTF++D GE+RL+ LD
Sbjct: 249 AQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLD 308
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVAL 368
FE ++Y+++I+A D GG S VL++V+DVND+ PEV +S+ +SP+PE++P +TVVAL
Sbjct: 309 FEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVAL 368
Query: 369 FSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLG 428
F++ D D GK++C ++EDLPF++K + GN Y+L+T+ LDRE + YN+TI D G
Sbjct: 369 FTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTG 428
Query: 429 TPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 488
P L+ + VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+T
Sbjct: 429 PPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQIT 488
Query: 489 YSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALV 548
YSLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F+F V A+D G +LSS+ V
Sbjct: 489 YSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTV 548
Query: 549 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 608
RV+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LL
Sbjct: 549 RVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLL 608
Query: 609 KATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFS 668
KAT+ GLF V NGE+ T R +SERD Q+L++LV+D+G+P S T +L++LLVDGFS
Sbjct: 609 KATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFS 668
Query: 669 QPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSR---AASVGR 725
+PYL + + + T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 669 EPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQE 728
Query: 726 CSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNI---------- 775
+ F +LV +G GSLS+ YE+C A G+G +EF+FLK +PN
Sbjct: 729 HFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEIK 788
Query: 776 --QGHSFGPEMEQNSNFR 791
G S P ++N + R
Sbjct: 789 MEAGSSLPPNSDRNKSQR 806
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 654 bits (1687), Expect = 0.0
Identities = 365/769 (47%), Positives = 489/769 (63%), Gaps = 13/769 (1%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
R QVL LL L A AA+ R YS+ EE E SFV N+ KDLGLE +E + GVR+VS
Sbjct: 10 RSEQVLLLTLLGTLWGAAAAQIR-YSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVS 68
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
RG LN L+ ++DRE+LC + C++ F +L+E + E++++DIND
Sbjct: 69 RGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDIND 128
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
++P FL +++ VK+ E++ P + FPL D D+G N+++ + +S NS+F V + + G
Sbjct: 129 NTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHG 188
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
KYPELVL+ LDRE EA RL LTA+DGG P RS AQ+ + V+DVNDN P F QP YR
Sbjct: 189 PKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYR 248
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
V + E+ P+ V+ V+ATD D GV+GE++YS + +++IS+ F ++ LTGEI LD
Sbjct: 249 VSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLD 308
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-TVVAL 368
+E YE+ +EARD G + VLI ++DVND+ PEV +++ + I E+AP TV+AL
Sbjct: 309 YEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIAL 368
Query: 369 FSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLG 428
F V D DSG NG ++CSI LPF L+ SVGN+Y L+T LDRE YN+T+T TD G
Sbjct: 369 FQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKG 428
Query: 429 TPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 488
TP L+T +++ V+D NDN P F +SY+++V ENN I SV+A D D NAQV+
Sbjct: 429 TPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVS 488
Query: 489 YSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALV 548
YSL PL+S VSIN+D G L+ALRS DYE L+ + V ASD G P LSS +
Sbjct: 489 YSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSL 548
Query: 549 RVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 607
+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 608 LKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGF 667
LKA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668
Query: 668 SQPYLPLPEAAPAQGQADS-LTVYLVVALASVSSLFLFSVLLFVAVLLCR--RSR---AA 721
L P+ DS LT+YLVVA+A+VS +FL V++ +A+ L R +SR A+
Sbjct: 669 PDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQAS 728
Query: 722 SVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
G S+P H V V G + Q Y +EV L S + F +P
Sbjct: 729 GGGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 654 bits (1687), Expect = 0.0
Identities = 365/769 (47%), Positives = 489/769 (63%), Gaps = 13/769 (1%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
R QVL LL L A AA+ R YS+ EE E SFV N+ KDLGLE +E + GVR+VS
Sbjct: 10 RSEQVLLLTLLGTLWGAAAAQIR-YSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVS 68
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
RG LN L+ ++DRE+LC + C++ F +L+E + E++++DIND
Sbjct: 69 RGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDIND 128
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
++P FL +++ VK+ E++ P + FPL D D+G N+++ + +S NS+F V + + G
Sbjct: 129 NTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHG 188
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
KYPELVL+ LDRE EA RL LTA+DGG P RS AQ+ + V+DVNDN P F QP YR
Sbjct: 189 PKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYR 248
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
V + E+ P+ V+ V+ATD D GV+GE++YS + +++IS+ F ++ LTGEI LD
Sbjct: 249 VSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLD 308
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-TVVAL 368
+E YE+ +EARD G + VLI ++DVND+ PEV +++ + I E+AP TV+AL
Sbjct: 309 YEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIAL 368
Query: 369 FSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLG 428
F V D DSG NG ++CSI LPF L+ SVGN+Y L+T LDRE YN+T+T TD G
Sbjct: 369 FQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKG 428
Query: 429 TPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 488
TP L+T +++ V+D NDN P F +SY+++V ENN I SV+A D D NAQV+
Sbjct: 429 TPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVS 488
Query: 489 YSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALV 548
YSL PL+S VSIN+D G L+ALRS DYE L+ + V ASD G P LSS +
Sbjct: 489 YSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSL 548
Query: 549 RVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 607
+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 608 LKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGF 667
LKA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668
Query: 668 SQPYLPLPEAAPAQGQADS-LTVYLVVALASVSSLFLFSVLLFVAVLLCR--RSR---AA 721
L P+ DS LT+YLVVA+A+VS +FL V++ +A+ L R +SR A+
Sbjct: 669 PDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQAS 728
Query: 722 SVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
G S+P H V V G + Q Y +EV L S + F +P
Sbjct: 729 GGGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 650 bits (1676), Expect = 0.0
Identities = 354/760 (46%), Positives = 485/760 (63%), Gaps = 12/760 (1%)
Query: 19 LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
L L L L A YSV EET+ SFV N+AKDLGL+ +E + GVR+VSRG L
Sbjct: 18 LSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFAL 77
Query: 79 NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
N + L+ ++DRE+LC + PC++ F +L+E + F E+++IDIND++P F ++
Sbjct: 78 NPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEE 137
Query: 139 MLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
+ K++E + PGT L +DLD+G N++++Y +S N +F + ++ +DG ++PE+VL
Sbjct: 138 LEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQ 197
Query: 199 NALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPI 258
+ LDREEEA L LTA DGG P RSGT ++YI+VVD NDN P F Q Y + + E+ P+
Sbjct: 198 SPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPL 257
Query: 259 SFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFEKFQSYEV 318
++ V+ATD D G NGE++YS +++ F++D TGEI K+ LDFE+++ Y +
Sbjct: 258 GTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSM 317
Query: 319 NIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN-APETVVALFSVSDLDSG 377
++A+D G K VLI+V+DVND+APEVT+++ T+ +PEN P T++AL SV D DSG
Sbjct: 318 EVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSG 377
Query: 378 ENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGTPRLTTHLN 437
+NG +C I +LPF L+ V N+Y L+TE LDRE + YN+TIT D GTP L+T +
Sbjct: 378 DNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETH 437
Query: 438 MTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDP 497
+++LV+D+NDN+P F Q SY+ ++ ENN I SV A D DS NAQ+TYSL+
Sbjct: 438 ISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQ 497
Query: 498 HLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDAND 557
PL++ +SIN+D G L+ALRS DYE + + +V A D G P LSS + + +LD ND
Sbjct: 498 GAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQND 557
Query: 558 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLF 616
N+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF
Sbjct: 558 NAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLF 617
Query: 617 GVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQPYLPLPE 676
V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D S L
Sbjct: 618 SVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGS 677
Query: 677 AAPAQGQADS-LTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVPEG---- 731
P+ DS LT+YLVVA A+VS +F L FV VLL R R R G
Sbjct: 678 LEPSAKPNDSDLTLYLVVAAAAVSCVF----LAFVIVLLAHRLRRWHKSRLLQASGGGLA 733
Query: 732 PFPG-HLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
PG H V V G + Q Y +EV L S + F +P
Sbjct: 734 SMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 650 bits (1676), Expect = 0.0
Identities = 354/760 (46%), Positives = 485/760 (63%), Gaps = 12/760 (1%)
Query: 19 LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
L L L L A YSV EET+ SFV N+AKDLGL+ +E + GVR+VSRG L
Sbjct: 18 LSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFAL 77
Query: 79 NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
N + L+ ++DRE+LC + PC++ F +L+E + F E+++IDIND++P F ++
Sbjct: 78 NPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEE 137
Query: 139 MLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
+ K++E + PGT L +DLD+G N++++Y +S N +F + ++ +DG ++PE+VL
Sbjct: 138 LEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQ 197
Query: 199 NALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPI 258
+ LDREEEA L LTA DGG P RSGT ++YI+VVD NDN P F Q Y + + E+ P+
Sbjct: 198 SPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPL 257
Query: 259 SFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFEKFQSYEV 318
++ V+ATD D G NGE++YS +++ F++D TGEI K+ LDFE+++ Y +
Sbjct: 258 GTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSM 317
Query: 319 NIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN-APETVVALFSVSDLDSG 377
++A+D G K VLI+V+DVND+APEVT+++ T+ +PEN P T++AL SV D DSG
Sbjct: 318 EVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSG 377
Query: 378 ENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGTPRLTTHLN 437
+NG +C I +LPF L+ V N+Y L+TE LDRE + YN+TIT D GTP L+T +
Sbjct: 378 DNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETH 437
Query: 438 MTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDP 497
+++LV+D+NDN+P F Q SY+ ++ ENN I SV A D DS NAQ+TYSL+
Sbjct: 438 ISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQ 497
Query: 498 HLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDAND 557
PL++ +SIN+D G L+ALRS DYE + + +V A D G P LSS + + +LD ND
Sbjct: 498 GAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQND 557
Query: 558 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLF 616
N+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF
Sbjct: 558 NAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLF 617
Query: 617 GVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQPYLPLPE 676
V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D S L
Sbjct: 618 SVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGS 677
Query: 677 AAPAQGQADS-LTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVPEG---- 731
P+ DS LT+YLVVA A+VS +F L FV VLL R R R G
Sbjct: 678 LEPSAKPNDSDLTLYLVVAAAAVSCVF----LAFVIVLLAHRLRRWHKSRLLQASGGGLA 733
Query: 732 PFPG-HLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
PG H V V G + Q Y +EV L S + F +P
Sbjct: 734 SMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 648 bits (1672), Expect = 0.0
Identities = 352/760 (46%), Positives = 489/760 (64%), Gaps = 12/760 (1%)
Query: 19 LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
+LLG A YSV EET+ SFV ++AKDLGLE RE + RGVR++SRG L
Sbjct: 18 ILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFAL 77
Query: 79 NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
NQ + L+ ++DRE++C + C++ F +L+E + ++++IDIND+ P FL ++
Sbjct: 78 NQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEE 137
Query: 139 MLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
+ VK+ E++ PG FPL A D D+G N++++Y +SPN +F + + D KYPELVL+
Sbjct: 138 INVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLE 197
Query: 199 NALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPI 258
LDREEE L LTA DGG PPRS TA + + VVDVND+ P F P Y+V + E+ P+
Sbjct: 198 RVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPV 257
Query: 259 SFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFEKFQSYEV 318
++ V A D+D GVNGE++YS + + ++ K F ++ LTGEI + LD+E+ YE+
Sbjct: 258 GTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEM 317
Query: 319 NIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSG 377
++A+D G K VLI V+DVND+APEVTM++ +S IPE+ P TV+ALF + D DSG
Sbjct: 318 EVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSG 377
Query: 378 ENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGTPRLTTHLN 437
+NG+++C+I E+LPF L+ S+ N+Y L+T LDRE+ + YN+T+ TD GTP L+ +
Sbjct: 378 KNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETH 437
Query: 438 MTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDP 497
+ + V+D NDN P F +SY++++ ENN I V+A D DS NAQ+TYSL
Sbjct: 438 IFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQ 497
Query: 498 HLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDAND 557
P++S VSIN+D G L+AL+S DYE L+ + RV A D G P LSS + + VLD ND
Sbjct: 498 GAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQND 557
Query: 558 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLF 616
N P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+EPGLF
Sbjct: 558 NPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLF 617
Query: 617 GVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQPYLPLPE 676
V + GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D + L
Sbjct: 618 AVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGS 677
Query: 677 AAPAQGQAD-SLTVYLVVALASVSSLFLFSVLLFVAVLLCR--RSR---AASVGRCSVPE 730
P+ G + LT+YLVVA+A+VS +FL VL+ +A+ L R +SR A+ G +VP
Sbjct: 678 LEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP- 736
Query: 731 GPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
H V + G + Q Y +EV L S + F +P
Sbjct: 737 ---TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 648 bits (1672), Expect = 0.0
Identities = 352/760 (46%), Positives = 489/760 (64%), Gaps = 12/760 (1%)
Query: 19 LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
+LLG A YSV EET+ SFV ++AKDLGLE RE + RGVR++SRG L
Sbjct: 18 ILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFAL 77
Query: 79 NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
NQ + L+ ++DRE++C + C++ F +L+E + ++++IDIND+ P FL ++
Sbjct: 78 NQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEE 137
Query: 139 MLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
+ VK+ E++ PG FPL A D D+G N++++Y +SPN +F + + D KYPELVL+
Sbjct: 138 INVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLE 197
Query: 199 NALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPI 258
LDREEE L LTA DGG PPRS TA + + VVDVND+ P F P Y+V + E+ P+
Sbjct: 198 RVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPV 257
Query: 259 SFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFEKFQSYEV 318
++ V A D+D GVNGE++YS + + ++ K F ++ LTGEI + LD+E+ YE+
Sbjct: 258 GTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEM 317
Query: 319 NIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSG 377
++A+D G K VLI V+DVND+APEVTM++ +S IPE+ P TV+ALF + D DSG
Sbjct: 318 EVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSG 377
Query: 378 ENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGTPRLTTHLN 437
+NG+++C+I E+LPF L+ S+ N+Y L+T LDRE+ + YN+T+ TD GTP L+ +
Sbjct: 378 KNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETH 437
Query: 438 MTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDP 497
+ + V+D NDN P F +SY++++ ENN I V+A D DS NAQ+TYSL
Sbjct: 438 IFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQ 497
Query: 498 HLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDAND 557
P++S VSIN+D G L+AL+S DYE L+ + RV A D G P LSS + + VLD ND
Sbjct: 498 GAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQND 557
Query: 558 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLF 616
N P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+EPGLF
Sbjct: 558 NPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLF 617
Query: 617 GVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQPYLPLPE 676
V + GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D + L
Sbjct: 618 AVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGS 677
Query: 677 AAPAQGQAD-SLTVYLVVALASVSSLFLFSVLLFVAVLLCR--RSR---AASVGRCSVPE 730
P+ G + LT+YLVVA+A+VS +FL VL+ +A+ L R +SR A+ G +VP
Sbjct: 678 LEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP- 736
Query: 731 GPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
H V + G + Q Y +EV L S + F +P
Sbjct: 737 ---TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 646 bits (1667), Expect = 0.0
Identities = 354/760 (46%), Positives = 480/760 (63%), Gaps = 12/760 (1%)
Query: 19 LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
LLLG+ + AE YSV EE E S V N+AKDLGL RE + RGVR+VSRG L
Sbjct: 18 LLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRTQLFAL 77
Query: 79 NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
N + L+ ++DRE+LC + CV ++LLE + + E+++ID+ND+ P F +Q
Sbjct: 78 NPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPSFGTEQ 137
Query: 139 MLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
+KV+E+ PG FPL A D D+G N+++ Y ++ N YF + + +DG KYPELVL+
Sbjct: 138 REIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYPELVLE 197
Query: 199 NALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPI 258
ALDREEEA L LTA DGG P RSGTA++ I +VD NDNAP F QP Y V + E+ P+
Sbjct: 198 RALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVRENVPV 257
Query: 259 SFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFEKFQSYEV 318
++ V ATD D G NG+++YS + D+IS+ F+++ L+G+I + LD+E Y++
Sbjct: 258 GTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDSGFYDI 317
Query: 319 NIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPE-NAPETVVALFSVSDLDSG 377
++EA D G + VL+ V+D ND+APEVT+++ TS + E ++P TV+ALF+V D DSG
Sbjct: 318 DVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVHDSDSG 377
Query: 378 ENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGTPRLTTHLN 437
NG ++CSI ++LPF L+ + GN+Y LLT LDRE +EYN+T+T TD GTP L+T +
Sbjct: 378 GNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPLSTETH 437
Query: 438 MTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDP 497
+++ V D+NDN P F SY+ ++ ENN I S++A D DSG NA++TYSL
Sbjct: 438 ISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLAEDTFQ 497
Query: 498 HLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDAND 557
PL+S VSIN++ G L+AL S DYE + + + ASD G P LSS + + VLD ND
Sbjct: 498 GAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFVLDQND 557
Query: 558 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLF 616
N P +LYP + EL PR+A+ GYLVTKVVAVD DSGQNAWLSY LLK++EPGLF
Sbjct: 558 NVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKSSEPGLF 617
Query: 617 GVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQPYLPLPE 676
V H GEVRTAR L +RDA KQRLVV+V+D+G+PP SAT TL + + D L
Sbjct: 618 AVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDVLADLGS 677
Query: 677 AAPAQGQADS-LTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVPEGPF-- 733
P+ DS LT+YLVVA+A+VS +F L FV VLL + R R EG
Sbjct: 678 LKPSADPDDSGLTLYLVVAVAAVSCVF----LAFVTVLLALKLRRWHKSRLLHAEGSRLA 733
Query: 734 ---PGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
H V V G + Q Y +EV L S + F +P
Sbjct: 734 GVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQP 773
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 646 bits (1667), Expect = 0.0
Identities = 354/760 (46%), Positives = 480/760 (63%), Gaps = 12/760 (1%)
Query: 19 LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
LLLG+ + AE YSV EE E S V N+AKDLGL RE + RGVR+VSRG L
Sbjct: 18 LLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRTQLFAL 77
Query: 79 NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
N + L+ ++DRE+LC + CV ++LLE + + E+++ID+ND+ P F +Q
Sbjct: 78 NPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPSFGTEQ 137
Query: 139 MLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
+KV+E+ PG FPL A D D+G N+++ Y ++ N YF + + +DG KYPELVL+
Sbjct: 138 REIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYPELVLE 197
Query: 199 NALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPI 258
ALDREEEA L LTA DGG P RSGTA++ I +VD NDNAP F QP Y V + E+ P+
Sbjct: 198 RALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVRENVPV 257
Query: 259 SFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFEKFQSYEV 318
++ V ATD D G NG+++YS + D+IS+ F+++ L+G+I + LD+E Y++
Sbjct: 258 GTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDSGFYDI 317
Query: 319 NIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPE-NAPETVVALFSVSDLDSG 377
++EA D G + VL+ V+D ND+APEVT+++ TS + E ++P TV+ALF+V D DSG
Sbjct: 318 DVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVHDSDSG 377
Query: 378 ENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGTPRLTTHLN 437
NG ++CSI ++LPF L+ + GN+Y LLT LDRE +EYN+T+T TD GTP L+T +
Sbjct: 378 GNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPLSTETH 437
Query: 438 MTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDP 497
+++ V D+NDN P F SY+ ++ ENN I S++A D DSG NA++TYSL
Sbjct: 438 ISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLAEDTFQ 497
Query: 498 HLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDAND 557
PL+S VSIN++ G L+AL S DYE + + + ASD G P LSS + + VLD ND
Sbjct: 498 GAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFVLDQND 557
Query: 558 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLF 616
N P +LYP + EL PR+A+ GYLVTKVVAVD DSGQNAWLSY LLK++EPGLF
Sbjct: 558 NVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKSSEPGLF 617
Query: 617 GVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQPYLPLPE 676
V H GEVRTAR L +RDA KQRLVV+V+D+G+PP SAT TL + + D L
Sbjct: 618 AVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDVLADLGS 677
Query: 677 AAPAQGQADS-LTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVPEGPF-- 733
P+ DS LT+YLVVA+A+VS +F L FV VLL + R R EG
Sbjct: 678 LKPSADPDDSGLTLYLVVAVAAVSCVF----LAFVTVLLALKLRRWHKSRLLHAEGSRLA 733
Query: 734 ---PGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
H V V G + Q Y +EV L S + F +P
Sbjct: 734 GVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQP 773
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 645 bits (1664), Expect = 0.0
Identities = 355/769 (46%), Positives = 488/769 (63%), Gaps = 12/769 (1%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
R R +L + LG A YSV EETE SFV N++KDLGLE RE ++RGVR+VS
Sbjct: 10 RSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVS 69
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
RG +N + L+ ++DRE+LC C L ++L+E + + E+++IDIND
Sbjct: 70 RGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDIND 129
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
++P F + ++ +KVSE + PG F L NA D D+G N++++Y +SPN+YF + R R+DG
Sbjct: 130 NAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDG 189
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
K PELVL+ +LDRE+EA L LTALDGG P R G + + V+DVND+ P F Q YR
Sbjct: 190 AKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYR 249
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
V + E+ V+ V+ATD D G+NGE+ YS + S+ F++D TGE++++ LD
Sbjct: 250 VSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLD 309
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-TVVAL 368
FEK++ YE+ I+ +D GG T+LI V+DVND+APE+T+++ + I EN+P TV+AL
Sbjct: 310 FEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIAL 369
Query: 369 FSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLG 428
+V D DSGENG++SC I LPF L+ + GN+Y L+T LDRE YN+T+T TD G
Sbjct: 370 LNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQG 429
Query: 429 TPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 488
+P L+ ++ + V+D NDN P F +SY+ ++ ENN I SV+A D DS NA VT
Sbjct: 430 SPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVT 489
Query: 489 YSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALV 548
YSL +PL+S VSIN++ G L+AL+S DYE + E RV A D G P LSS +
Sbjct: 490 YSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSL 549
Query: 549 RVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 607
+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 550 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRL 609
Query: 608 LKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGF 667
LKA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D
Sbjct: 610 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 669
Query: 668 SQPYLPLPE-AAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCR--RSR---AA 721
+ L + A + L++YLVVA+A+VS +FL V++ +A+ L R +SR A+
Sbjct: 670 PEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQAS 729
Query: 722 SVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
G +P H V V G + Q Y +EV L S + F +P
Sbjct: 730 EGGLAGMP----TSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQP 774
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 645 bits (1664), Expect = 0.0
Identities = 355/769 (46%), Positives = 488/769 (63%), Gaps = 12/769 (1%)
Query: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
R R +L + LG A YSV EETE SFV N++KDLGLE RE ++RGVR+VS
Sbjct: 10 RSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVS 69
Query: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
RG +N + L+ ++DRE+LC C L ++L+E + + E+++IDIND
Sbjct: 70 RGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDIND 129
Query: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
++P F + ++ +KVSE + PG F L NA D D+G N++++Y +SPN+YF + R R+DG
Sbjct: 130 NAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDG 189
Query: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
K PELVL+ +LDRE+EA L LTALDGG P R G + + V+DVND+ P F Q YR
Sbjct: 190 AKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYR 249
Query: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
V + E+ V+ V+ATD D G+NGE+ YS + S+ F++D TGE++++ LD
Sbjct: 250 VSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLD 309
Query: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-TVVAL 368
FEK++ YE+ I+ +D GG T+LI V+DVND+APE+T+++ + I EN+P TV+AL
Sbjct: 310 FEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIAL 369
Query: 369 FSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLG 428
+V D DSGENG++SC I LPF L+ + GN+Y L+T LDRE YN+T+T TD G
Sbjct: 370 LNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQG 429
Query: 429 TPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 488
+P L+ ++ + V+D NDN P F +SY+ ++ ENN I SV+A D DS NA VT
Sbjct: 430 SPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVT 489
Query: 489 YSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALV 548
YSL +PL+S VSIN++ G L+AL+S DYE + E RV A D G P LSS +
Sbjct: 490 YSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSL 549
Query: 549 RVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 607
+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 550 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRL 609
Query: 608 LKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGF 667
LKA+EPGLF V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D
Sbjct: 610 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 669
Query: 668 SQPYLPLPE-AAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCR--RSR---AA 721
+ L + A + L++YLVVA+A+VS +FL V++ +A+ L R +SR A+
Sbjct: 670 PEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQAS 729
Query: 722 SVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
G +P H V V G + Q Y +EV L S + F +P
Sbjct: 730 EGGLAGMP----TSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQP 774
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 643 bits (1659), Expect = 0.0
Identities = 356/769 (46%), Positives = 491/769 (63%), Gaps = 18/769 (2%)
Query: 8 ICRQRQVLFSFLLLGLSLAGAAEPRS--YSVVEETEGSSFVTNLAKDLGLEQREFSRRGV 65
+ R QVL FLL SL A P YS+ EE +S V NLAKDLGL R+ R +
Sbjct: 10 LVRWLQVLLPFLL---SLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKL 66
Query: 66 RVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVI 125
RV + K + +N E+ DLL+++++DRE +CG CVL F + E+P F + V
Sbjct: 67 RVSAE--KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQ 124
Query: 126 DINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRK 185
DIND++P+F ++ +K+ ES+ PGT FPL A D D+G N+++ Y ++ N YF + ++
Sbjct: 125 DINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQ 184
Query: 186 RSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQ 245
DGRKYPEL+L ++LDREE + +L LTA+DGG PP+SGT Q+ I+V D NDN P F Q
Sbjct: 185 TPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQ 244
Query: 246 PFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLK 305
YRV + ED P F V++V+ATD D G+N EI+YS +++ F ++ TGEI K
Sbjct: 245 DVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTK 304
Query: 306 KQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-T 364
LDFE SY ++IEA+D G + C++ ++++D ND APEV +++ ++P+PE++P T
Sbjct: 305 DDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGT 364
Query: 365 VVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITV 424
V+AL D DSGENG++ C + + F+LKSS N+Y L+T+ LDRE EYN+TIT
Sbjct: 365 VIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITA 424
Query: 425 TDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTN 484
TD G P L++ + +T+ +SDVNDNAP F QTSY + V ENN P I +SA+D D G +
Sbjct: 425 TDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPS 484
Query: 485 AQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSS 544
QV+YS++ + S VS++ +G +FA R+ D+E L+AFE + A D+GSPALS+
Sbjct: 485 GQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 544
Query: 545 EALVRVLVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 602
+RVLV D NDN+P VLYP +GSA ++VPRAAEPGYLVTKVVAVD DSG NAW
Sbjct: 545 NVSLRVLVGDLNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNAW 603
Query: 603 LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLL 662
LSY +L+A+EPGLF + GEVRTAR L +RDAA+QRL+V V+D G+PP SATATLHL+
Sbjct: 604 LSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLI 663
Query: 663 LVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAAS 722
D + L + L YLVVALA +S LF +V+L +++ L R S +
Sbjct: 664 FADSLQEVLPDLSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRL-RLSSRSD 722
Query: 723 VGRCSVP---EGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFL 768
C P P PG L + G+L Y Y +C+A S EF FL
Sbjct: 723 AWDCFQPGLSSKPGPGVLPNY-SEGTLP--YSYNLCVASQSAKTEFNFL 768
>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
[Homo sapiens]
Length = 811
Score = 643 bits (1659), Expect = 0.0
Identities = 356/769 (46%), Positives = 491/769 (63%), Gaps = 18/769 (2%)
Query: 8 ICRQRQVLFSFLLLGLSLAGAAEPRS--YSVVEETEGSSFVTNLAKDLGLEQREFSRRGV 65
+ R QVL FLL SL A P YS+ EE +S V NLAKDLGL R+ R +
Sbjct: 10 LVRWLQVLLPFLL---SLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKL 66
Query: 66 RVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVI 125
RV + K + +N E+ DLL+++++DRE +CG CVL F + E+P F + V
Sbjct: 67 RVSAE--KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQ 124
Query: 126 DINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRK 185
DIND++P+F ++ +K+ ES+ PGT FPL A D D+G N+++ Y ++ N YF + ++
Sbjct: 125 DINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQ 184
Query: 186 RSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQ 245
DGRKYPEL+L ++LDREE + +L LTA+DGG PP+SGT Q+ I+V D NDN P F Q
Sbjct: 185 TPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQ 244
Query: 246 PFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLK 305
YRV + ED P F V++V+ATD D G+N EI+YS +++ F ++ TGEI K
Sbjct: 245 DVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTK 304
Query: 306 KQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-T 364
LDFE SY ++IEA+D G + C++ ++++D ND APEV +++ ++P+PE++P T
Sbjct: 305 DDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGT 364
Query: 365 VVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITV 424
V+AL D DSGENG++ C + + F+LKSS N+Y L+T+ LDRE EYN+TIT
Sbjct: 365 VIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITA 424
Query: 425 TDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTN 484
TD G P L++ + +T+ +SDVNDNAP F QTSY + V ENN P I +SA+D D G +
Sbjct: 425 TDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPS 484
Query: 485 AQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSS 544
QV+YS++ + S VS++ +G +FA R+ D+E L+AFE + A D+GSPALS+
Sbjct: 485 GQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 544
Query: 545 EALVRVLVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 602
+RVLV D NDN+P VLYP +GSA ++VPRAAEPGYLVTKVVAVD DSG NAW
Sbjct: 545 NVSLRVLVGDLNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNAW 603
Query: 603 LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLL 662
LSY +L+A+EPGLF + GEVRTAR L +RDAA+QRL+V V+D G+PP SATATLHL+
Sbjct: 604 LSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLI 663
Query: 663 LVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAAS 722
D + L + L YLVVALA +S LF +V+L +++ L R S +
Sbjct: 664 FADSLQEVLPDLSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRL-RLSSRSD 722
Query: 723 VGRCSVP---EGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFL 768
C P P PG L + G+L Y Y +C+A S EF FL
Sbjct: 723 AWDCFQPGLSSKPGPGVLPNY-SEGTLP--YSYNLCVASQSAKTEFNFL 768
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 642 bits (1657), Expect = 0.0
Identities = 352/759 (46%), Positives = 481/759 (63%), Gaps = 10/759 (1%)
Query: 19 LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
L G+ A SYS+ EE E SFV N++KDLGL RE + RGVR+VSRG L
Sbjct: 22 LFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSL 81
Query: 79 NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
N + L+ ++DRE+LC + CV+ F +L+E + F E++V DIND++P F +
Sbjct: 82 NPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAEN 141
Query: 139 MLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
+ VK++E+ G FPL A D D+G N++++Y +SPN +F + + R++G KYPELVL+
Sbjct: 142 LDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLE 201
Query: 199 NALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPI 258
++LDREEEA L LTA DGG P RSGT V + V D NDNAP F P YRV + E+ P+
Sbjct: 202 HSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPV 261
Query: 259 SFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFEKFQSYEV 318
++ V+ATD D G NGE++YS + D F+++ TGEI++ + LD+E+ YE+
Sbjct: 262 GTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEI 321
Query: 319 NIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSG 377
I+A D G + VLI V DVND++PE+T+++ SP+ E++P TVVAL +V DLDS
Sbjct: 322 EIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSE 381
Query: 378 ENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGTPRLTTHLN 437
+NG+++CSI LPF L+ S+ ++Y L+ LDRE + YN+T+T TD G+P L+T +
Sbjct: 382 QNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAH 441
Query: 438 MTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDP 497
+ V+D+NDN P F+Q SY ++ ENN+ I SV+A D DS NAQ+ YSL
Sbjct: 442 FMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQ 501
Query: 498 HLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDAND 557
+PL+S +SIN+D G L+ALRS DYE + +V ASD G P LSS + + VLD ND
Sbjct: 502 GVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQND 561
Query: 558 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLF 616
N+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF
Sbjct: 562 NAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLF 621
Query: 617 GVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQPYLPLPE 676
V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D Q L
Sbjct: 622 AVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGS 681
Query: 677 -AAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCR----RSRAASVGRCSVPEG 731
+PA + LT+YLVVA+A+VS +FL V++ +A L R R AS G + G
Sbjct: 682 FESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG 741
Query: 732 PFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
H V V G + Q Y +EV L S + F +P
Sbjct: 742 ---SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 642 bits (1657), Expect = 0.0
Identities = 352/759 (46%), Positives = 481/759 (63%), Gaps = 10/759 (1%)
Query: 19 LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
L G+ A SYS+ EE E SFV N++KDLGL RE + RGVR+VSRG L
Sbjct: 22 LFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSL 81
Query: 79 NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
N + L+ ++DRE+LC + CV+ F +L+E + F E++V DIND++P F +
Sbjct: 82 NPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAEN 141
Query: 139 MLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
+ VK++E+ G FPL A D D+G N++++Y +SPN +F + + R++G KYPELVL+
Sbjct: 142 LDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLE 201
Query: 199 NALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPI 258
++LDREEEA L LTA DGG P RSGT V + V D NDNAP F P YRV + E+ P+
Sbjct: 202 HSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPV 261
Query: 259 SFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFEKFQSYEV 318
++ V+ATD D G NGE++YS + D F+++ TGEI++ + LD+E+ YE+
Sbjct: 262 GTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEI 321
Query: 319 NIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSG 377
I+A D G + VLI V DVND++PE+T+++ SP+ E++P TVVAL +V DLDS
Sbjct: 322 EIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSE 381
Query: 378 ENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGTPRLTTHLN 437
+NG+++CSI LPF L+ S+ ++Y L+ LDRE + YN+T+T TD G+P L+T +
Sbjct: 382 QNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAH 441
Query: 438 MTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDP 497
+ V+D+NDN P F+Q SY ++ ENN+ I SV+A D DS NAQ+ YSL
Sbjct: 442 FMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQ 501
Query: 498 HLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDAND 557
+PL+S +SIN+D G L+ALRS DYE + +V ASD G P LSS + + VLD ND
Sbjct: 502 GVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQND 561
Query: 558 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLF 616
N+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF
Sbjct: 562 NAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLF 621
Query: 617 GVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQPYLPLPE 676
V H GEVRTAR L +RDA KQ LVV V+D+G+PP SAT TL + + D Q L
Sbjct: 622 AVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGS 681
Query: 677 -AAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCR----RSRAASVGRCSVPEG 731
+PA + LT+YLVVA+A+VS +FL V++ +A L R R AS G + G
Sbjct: 682 FESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG 741
Query: 732 PFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKP 770
H V V G + Q Y +EV L S + F +P
Sbjct: 742 ---SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,490,247
Number of Sequences: 37866
Number of extensions: 1395169
Number of successful extensions: 10303
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3110
Number of HSP's gapped (non-prelim): 622
length of query: 801
length of database: 18,247,518
effective HSP length: 110
effective length of query: 691
effective length of database: 14,082,258
effective search space: 9730840278
effective search space used: 9730840278
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.