Guide to the Human Genome
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Search of human proteins with 169210188

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169210188 PREDICTED: similar to hCG2042391 [Homo sapiens]
         (129 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169209673 PREDICTED: similar to hCG2042391 [Homo sapiens]          270   2e-73
gi|169210658 PREDICTED: similar to hCG2042391 [Homo sapiens]          270   2e-73
gi|169210188 PREDICTED: similar to hCG2042391 [Homo sapiens]          270   2e-73
gi|239750115 PREDICTED: similar to hCG2042391 [Homo sapiens]          244   1e-65
gi|239755573 PREDICTED: similar to ectonucleotide pyrophosphatas...   216   3e-57
gi|239743493 PREDICTED: hypothetical protein XP_002342862 [Homo ...   213   3e-56
gi|239743501 PREDICTED: similar to hCG2042391 [Homo sapiens]          211   1e-55
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas...   154   2e-38
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas...   154   2e-38
gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7 [...   115   1e-26
gi|11034849 ectonucleotide pyrophosphatase/phosphodiesterase 5 (...    52   1e-07
gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4 (p...    44   4e-05
gi|111160296 ectonucleotide pyrophosphatase/phosphodiesterase 3 ...    38   0.002
gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1 ...    36   0.010
gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens]          32   0.11 
gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens]           32   0.11 
gi|23503267 ectonucleotide pyrophosphatase/phosphodiesterase 6 [...    30   0.53 
gi|108773804 Fraser syndrome 1 [Homo sapiens]                          29   0.90 
gi|21361120 calponin 1, basic, smooth muscle [Homo sapiens]            28   2.0  
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]                    28   2.0  
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]                    28   2.0  
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]                    28   2.0  
gi|187608446 phosphatidylinositol glycan anchor biosynthesis, cl...    28   2.0  
gi|187608438 phosphatidylinositol glycan anchor biosynthesis, cl...    28   2.0  
gi|166295196 checkpoint kinase 1 [Homo sapiens]                        27   5.8  
gi|166295194 checkpoint kinase 1 [Homo sapiens]                        27   5.8  
gi|166295192 checkpoint kinase 1 [Homo sapiens]                        27   5.8  
gi|18641360 collectin sub-family member 12 [Homo sapiens]              26   7.6  
gi|189409125 transcription factor Dp family, member 3 [Homo sapi...    26   9.9  

>gi|169209673 PREDICTED: similar to hCG2042391 [Homo sapiens]
          Length = 129

 Score =  270 bits (690), Expect = 2e-73
 Identities = 129/129 (100%), Positives = 129/129 (100%)

Query: 1   MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
           MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV
Sbjct: 1   MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60

Query: 61  MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
           MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS
Sbjct: 61  MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120

Query: 121 VSSSHEAMG 129
           VSSSHEAMG
Sbjct: 121 VSSSHEAMG 129


>gi|169210658 PREDICTED: similar to hCG2042391 [Homo sapiens]
          Length = 129

 Score =  270 bits (690), Expect = 2e-73
 Identities = 129/129 (100%), Positives = 129/129 (100%)

Query: 1   MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
           MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV
Sbjct: 1   MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60

Query: 61  MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
           MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS
Sbjct: 61  MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120

Query: 121 VSSSHEAMG 129
           VSSSHEAMG
Sbjct: 121 VSSSHEAMG 129


>gi|169210188 PREDICTED: similar to hCG2042391 [Homo sapiens]
          Length = 129

 Score =  270 bits (690), Expect = 2e-73
 Identities = 129/129 (100%), Positives = 129/129 (100%)

Query: 1   MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
           MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV
Sbjct: 1   MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60

Query: 61  MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
           MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS
Sbjct: 61  MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120

Query: 121 VSSSHEAMG 129
           VSSSHEAMG
Sbjct: 121 VSSSHEAMG 129


>gi|239750115 PREDICTED: similar to hCG2042391 [Homo sapiens]
          Length = 149

 Score =  244 bits (623), Expect = 1e-65
 Identities = 118/129 (91%), Positives = 121/129 (93%)

Query: 1   MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
           MRNGP+GIFFLYLQ NKAASSHYSRGGAKY+GEAVKR LVESYTHPNSNETE RENIDTV
Sbjct: 21  MRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLVESYTHPNSNETERRENIDTV 80

Query: 61  MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
           MNWFTKEDFD VTLCYREPDNV HRF PEAENRKLMIQQ+DRTIGYLVGATEKHSLQSTS
Sbjct: 81  MNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQLDRTIGYLVGATEKHSLQSTS 140

Query: 121 VSSSHEAMG 129
            SSSHE MG
Sbjct: 141 ASSSHETMG 149


>gi|239755573 PREDICTED: similar to ectonucleotide
           pyrophosphatase/phosphodiesterase 5 (putative function)
           [Homo sapiens]
          Length = 661

 Score =  216 bits (551), Expect = 3e-57
 Identities = 106/121 (87%), Positives = 111/121 (91%)

Query: 1   MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
           MRNGPDGIF LY++G KAASSHYSRGGAKY+GEAVKRSLVESYTH NSNETE RENIDTV
Sbjct: 211 MRNGPDGIFLLYVKGKKAASSHYSRGGAKYEGEAVKRSLVESYTHQNSNETEQRENIDTV 270

Query: 61  MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
           MN FTKEDFDFVTL YR+PDNVGHRF PEAENRKLMIQQ+DRTI YLVGATEKHSLQS  
Sbjct: 271 MNCFTKEDFDFVTLYYRQPDNVGHRFKPEAENRKLMIQQLDRTIWYLVGATEKHSLQSPQ 330

Query: 121 V 121
           V
Sbjct: 331 V 331


>gi|239743493 PREDICTED: hypothetical protein XP_002342862 [Homo
           sapiens]
          Length = 169

 Score =  213 bits (543), Expect = 3e-56
 Identities = 102/115 (88%), Positives = 108/115 (93%)

Query: 15  GNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTL 74
           GN+AAS HYSRGGAKY+GEAVK SLV+SYTHP+SNETE +ENIDTVMNWFTKEDFDFVTL
Sbjct: 55  GNRAASFHYSRGGAKYEGEAVKWSLVDSYTHPSSNETERKENIDTVMNWFTKEDFDFVTL 114

Query: 75  CYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTSVSSSHEAMG 129
           CYREPDNVGHRFGPEAE RKLMIQQIDRTIGYLVGATEKHSLQSTS SS HE +G
Sbjct: 115 CYREPDNVGHRFGPEAEKRKLMIQQIDRTIGYLVGATEKHSLQSTSASSLHETVG 169


>gi|239743501 PREDICTED: similar to hCG2042391 [Homo sapiens]
          Length = 169

 Score =  211 bits (537), Expect = 1e-55
 Identities = 101/115 (87%), Positives = 107/115 (93%)

Query: 15  GNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTL 74
           GN+AAS HYSRGGAKY+GEAVK SLV+SYTHP+SNETE +ENID VMNWFTKEDFDFVTL
Sbjct: 55  GNRAASFHYSRGGAKYEGEAVKWSLVDSYTHPSSNETERKENIDIVMNWFTKEDFDFVTL 114

Query: 75  CYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTSVSSSHEAMG 129
           CYREPDNVGHRFGPEAE RKLMIQQIDRTIGYLVGATEKHSLQSTS SS HE +G
Sbjct: 115 CYREPDNVGHRFGPEAEKRKLMIQQIDRTIGYLVGATEKHSLQSTSASSLHETVG 169


>gi|169217659 PREDICTED: similar to ectonucleotide
           pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
          Length = 542

 Score =  154 bits (388), Expect = 2e-38
 Identities = 71/78 (91%), Positives = 75/78 (96%)

Query: 31  DGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGHRFGPEA 90
           +GEAVKRSLVESYTHPNSNETE RENIDT+MNWFTKEDFDFVTLCYREPDNVGHRFGPEA
Sbjct: 20  EGEAVKRSLVESYTHPNSNETERRENIDTIMNWFTKEDFDFVTLCYREPDNVGHRFGPEA 79

Query: 91  ENRKLMIQQIDRTIGYLV 108
           ENRKLMIQQI RTIG ++
Sbjct: 80  ENRKLMIQQIGRTIGVII 97


>gi|169167316 PREDICTED: similar to ectonucleotide
           pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
          Length = 542

 Score =  154 bits (388), Expect = 2e-38
 Identities = 71/78 (91%), Positives = 75/78 (96%)

Query: 31  DGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGHRFGPEA 90
           +GEAVKRSLVESYTHPNSNETE RENIDT+MNWFTKEDFDFVTLCYREPDNVGHRFGPEA
Sbjct: 20  EGEAVKRSLVESYTHPNSNETERRENIDTIMNWFTKEDFDFVTLCYREPDNVGHRFGPEA 79

Query: 91  ENRKLMIQQIDRTIGYLV 108
           ENRKLMIQQI RTIG ++
Sbjct: 80  ENRKLMIQQIGRTIGVII 97


>gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7
           [Homo sapiens]
          Length = 458

 Score =  115 bits (287), Expect = 1e-26
 Identities = 53/94 (56%), Positives = 64/94 (68%)

Query: 14  QGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVT 73
           QG +A S  Y  G   Y G AV RS  E   H   NETEWR NIDTVM WFT+ED D VT
Sbjct: 133 QGLRAGSFFYPGGNVTYQGVAVTRSRKEGIAHNYKNETEWRANIDTVMAWFTEEDLDLVT 192

Query: 74  LCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYL 107
           L + EPD+ GHR+GPE+  R+ M++Q+DRT+GYL
Sbjct: 193 LYFGEPDSTGHRYGPESPERREMVRQVDRTVGYL 226


>gi|11034849 ectonucleotide pyrophosphatase/phosphodiesterase 5
           (putative function) [Homo sapiens]
          Length = 477

 Score = 52.0 bits (123), Expect = 1e-07
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)

Query: 23  YSRGGAKYDGEAVK-RSLVESYTHPNSNETEWRENIDTVMNWFT-KEDFDFVTLCYREPD 80
           ++ G A + G  VK      ++  P +    + + +  ++ WFT KE  +   L + +PD
Sbjct: 132 HTSGAAMWPGTDVKIHKRFPTHYMPYNESVSFEDRVAKIIEWFTSKEPINLGLLYWEDPD 191

Query: 81  NVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQST 119
           ++GH  GP++     +I  ID+ +GYL+   +K  L +T
Sbjct: 192 DMGHHLGPDSPLMGPVISDIDKKLGYLIQMLKKAKLWNT 230


>gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4
           (putative function) [Homo sapiens]
          Length = 453

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 40  VESYTHPNSNETEWRENIDTVMNWFTKED--FDFVTLCYREPDNVGHRFGPE-AENRKLM 96
           + SY    ++   + E ++ +  W    +    F TL + EPD  GH++GPE  EN   +
Sbjct: 147 ISSYFMNYNSSVSFEERLNNITMWLNNSNPPVTFATLYWEEPDASGHKYGPEDKENMSRV 206

Query: 97  IQQIDRTIGYLV 108
           +++ID  IG LV
Sbjct: 207 LKKIDDLIGDLV 218


>gi|111160296 ectonucleotide pyrophosphatase/phosphodiesterase 3
           [Homo sapiens]
          Length = 875

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 14  QGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFD--- 70
           QG KAA+  +       +G         S   P +    + E I T++ W      +   
Sbjct: 262 QGLKAATYFWPGSEVAINGS------FPSIYMPYNGSVPFEERISTLLKWLDLPKAERPR 315

Query: 71  FVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQS 118
           F T+ + EPD+ GH  GP +      +Q +D   G L+   ++ +L +
Sbjct: 316 FYTMYFEEPDSSGHAGGPVSARVIKALQVVDHAFGMLMEGLKQRNLHN 363


>gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1
           [Homo sapiens]
          Length = 925

 Score = 35.8 bits (81), Expect = 0.010
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 53  WRENIDTVMNWFT---KEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVG 109
           + E I  V+ W      E   F TL   EPD+ GH +GP +      +Q++D  +G L+ 
Sbjct: 346 FEERILAVLQWLQLPKDERPHFYTLYLEEPDSSGHSYGPVSSEVIKALQRVDGMVGMLMD 405

Query: 110 ATEKHSL 116
             ++ +L
Sbjct: 406 GLKELNL 412


>gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens]
          Length = 888

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 59  TVMNWFTKEDFD--FVTLCYRE-PDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHS 115
           T++ W T  D +   V   Y E PD  GH++GP        +++ID+ +G L+   ++  
Sbjct: 288 TILQWLTLPDHERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKIVGQLMDGLKQLK 347

Query: 116 L 116
           L
Sbjct: 348 L 348


>gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens]
          Length = 863

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 59  TVMNWFTKEDFD--FVTLCYRE-PDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHS 115
           T++ W T  D +   V   Y E PD  GH++GP        +++ID+ +G L+   ++  
Sbjct: 288 TILQWLTLPDHERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKIVGQLMDGLKQLK 347

Query: 116 L 116
           L
Sbjct: 348 L 348


>gi|23503267 ectonucleotide pyrophosphatase/phosphodiesterase 6
           [Homo sapiens]
          Length = 440

 Score = 30.0 bits (66), Expect = 0.53
 Identities = 13/61 (21%), Positives = 27/61 (44%)

Query: 57  IDTVMNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSL 116
           +   ++ F     D   + +   D  GH +GP +  RK  ++ +D  + Y+    ++  L
Sbjct: 170 VSDALDSFKSGRADLAAIYHERIDVEGHHYGPASPQRKDALKAVDTVLKYMTKWIQERGL 229

Query: 117 Q 117
           Q
Sbjct: 230 Q 230


>gi|108773804 Fraser syndrome 1 [Homo sapiens]
          Length = 4011

 Score = 29.3 bits (64), Expect = 0.90
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 45   HPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGH 84
            HPN    E R++  + + +FT+ED +   + YR P    H
Sbjct: 1509 HPNQGIIEHRDHPHSPIRYFTQEDINQGKVMYRPPPAAPH 1548


>gi|21361120 calponin 1, basic, smooth muscle [Homo sapiens]
          Length = 297

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 19 ASSHYSRGGAKYDGEAVKRSLVESYTHPNSNE-TEWRENI 57
          +S+H++RG A      VK  L + Y H    E  EW E +
Sbjct: 2  SSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGV 41


>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3874

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 5    PDGIFFLYLQGNKAASSHYSRGGAKYDGEAVK 36
            PDG+    LQ N +++ HYS   A   GE  K
Sbjct: 1305 PDGVLLQVLQANLSSAGHYSCIAANAVGEKTK 1336


>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 5065

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 5    PDGIFFLYLQGNKAASSHYSRGGAKYDGEAVK 36
            PDG+    LQ N +++ HYS   A   GE  K
Sbjct: 2496 PDGVLLQVLQANLSSAGHYSCIAANAVGEKTK 2527


>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3783

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 5    PDGIFFLYLQGNKAASSHYSRGGAKYDGEAVK 36
            PDG+    LQ N +++ HYS   A   GE  K
Sbjct: 1214 PDGVLLQVLQANLSSAGHYSCIAANAVGEKTK 1245


>gi|187608446 phosphatidylinositol glycan anchor biosynthesis, class
           G isoform 1 [Homo sapiens]
          Length = 983

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 8/62 (12%)

Query: 29  KYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGHRFGP 88
           +YDG       V  YT  ++N T    ++D V+    + D+D + L Y   D++GH  GP
Sbjct: 176 EYDGTT--SFFVSDYTEVDNNVTR---HLDKVLK---RGDWDILILHYLGLDHIGHISGP 227

Query: 89  EA 90
            +
Sbjct: 228 NS 229


>gi|187608438 phosphatidylinositol glycan anchor biosynthesis, class
           G isoform 2 [Homo sapiens]
          Length = 975

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 8/62 (12%)

Query: 29  KYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGHRFGP 88
           +YDG       V  YT  ++N T    ++D V+    + D+D + L Y   D++GH  GP
Sbjct: 176 EYDGTT--SFFVSDYTEVDNNVTR---HLDKVLK---RGDWDILILHYLGLDHIGHISGP 227

Query: 89  EA 90
            +
Sbjct: 228 NS 229


>gi|166295196 checkpoint kinase 1 [Homo sapiens]
          Length = 476

 Score = 26.6 bits (57), Expect = 5.8
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 46  PNSNETEWRENIDTVMNWFTKEDFDFVTLCYREP-DNVGHRFGPEAENRKLMIQQIDRTI 104
           P S++  W+  +  +  +FTK D D    C +E  + +G+++     N ++ I   DR  
Sbjct: 363 PGSSQNPWQRLVKRMTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMN-QVTISTTDRRN 421

Query: 105 GYLV 108
             L+
Sbjct: 422 NKLI 425


>gi|166295194 checkpoint kinase 1 [Homo sapiens]
          Length = 476

 Score = 26.6 bits (57), Expect = 5.8
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 46  PNSNETEWRENIDTVMNWFTKEDFDFVTLCYREP-DNVGHRFGPEAENRKLMIQQIDRTI 104
           P S++  W+  +  +  +FTK D D    C +E  + +G+++     N ++ I   DR  
Sbjct: 363 PGSSQNPWQRLVKRMTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMN-QVTISTTDRRN 421

Query: 105 GYLV 108
             L+
Sbjct: 422 NKLI 425


>gi|166295192 checkpoint kinase 1 [Homo sapiens]
          Length = 476

 Score = 26.6 bits (57), Expect = 5.8
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 46  PNSNETEWRENIDTVMNWFTKEDFDFVTLCYREP-DNVGHRFGPEAENRKLMIQQIDRTI 104
           P S++  W+  +  +  +FTK D D    C +E  + +G+++     N ++ I   DR  
Sbjct: 363 PGSSQNPWQRLVKRMTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMN-QVTISTTDRRN 421

Query: 105 GYLV 108
             L+
Sbjct: 422 NKLI 425


>gi|18641360 collectin sub-family member 12 [Homo sapiens]
          Length = 742

 Score = 26.2 bits (56), Expect = 7.6
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 13/74 (17%)

Query: 20  SSHYSRGGAKYDGEAVKRSLVESYTH-----PNSNETEWRENIDTVMNWFTKEDFDFVTL 74
           SSH      + + + +K+ +V   +H      +  E EW+        W      D+   
Sbjct: 639 SSHLVFINTREEQQWIKKQMVGRESHWIGLTDSERENEWK--------WLDGTSPDYKNW 690

Query: 75  CYREPDNVGHRFGP 88
              +PDN GH  GP
Sbjct: 691 KAGQPDNWGHGHGP 704


>gi|189409125 transcription factor Dp family, member 3 [Homo
           sapiens]
          Length = 405

 Score = 25.8 bits (55), Expect = 9.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 24  SRGGAKYDGEAVKRSLVESYTHPNSNETEWREN 56
           S GG++Y G  V+   VE     ++N+ +  EN
Sbjct: 369 SSGGSQYSGSRVETPAVEEEEEEDNNDDDLSEN 401


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,951,960
Number of Sequences: 37866
Number of extensions: 187444
Number of successful extensions: 303
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 280
Number of HSP's gapped (non-prelim): 30
length of query: 129
length of database: 18,247,518
effective HSP length: 90
effective length of query: 39
effective length of database: 14,839,578
effective search space: 578743542
effective search space used: 578743542
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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