Guide to the Human Genome
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Name: LOC646344 Sequence: fasta or formatted (169aa) NCBI GI: 239743501
Description:

PREDICTED: similar to hCG2042391

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         10           2
 C cysteine            1.2          2           1
 D aspartate           4.1          7           1
 E glutamate           8.3         14           1
 F phenylalanine       3.6          6           1
 G glycine             7.1         12           2
 H histidine           3.0          5           1
 I isoleucine          4.1          7           1
 K lysine              7.1         12           2
 L leucine             8.3         14           2
 M methionine          3.0          5           1
 N asparagine          4.1          7           1
 P proline             3.6          6           2
 Q glutamine           3.6          6           2
 R arginine            5.3          9           1
 S serine              7.7         13           2
 T threonine           8.9         15           1
 V valine              6.5         11           1
 W tryptophan          1.8          3           1
 Y tyrosine            3.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG2042391 
LOC100287665          0.975   PREDICTED: hypothetical protein XP_002342862 
LOC650177             0.581   PREDICTED: similar to hCG2042391 
LOC650177             0.581   PREDICTED: similar to hCG2042391 
LOC650177             0.581   PREDICTED: similar to hCG2042391 
LOC729213             0.562   PREDICTED: similar to hCG2042391 
LOC729213             0.478   PREDICTED: similar to ectonucleotide pyrophosphatas...
LOC731551             0.378   PREDICTED: similar to ectonucleotide pyrophosphatas...
LOC650354             0.378   PREDICTED: similar to ectonucleotide pyrophosphatas...
ENPP7                 0.250   ectonucleotide pyrophosphatase/phosphodiesterase 7 [...
ENPP5                 0.078   ectonucleotide pyrophosphatase/phosphodiesterase 5 (...
ENPP4                 0.044   ectonucleotide pyrophosphatase/phosphodiesterase 4 (p...
PPHLN1                0.044   periphilin 1 isoform 6 
PPHLN1                0.044   periphilin 1 isoform 1 
ENPP1                 0.034   ectonucleotide pyrophosphatase/phosphodiesterase 1 ...
ENPP3                 0.031   ectonucleotide pyrophosphatase/phosphodiesterase 3 ...
ENPP2                 0.019   autotaxin isoform 3 preproprotein 
ENPP2                 0.019   autotaxin isoform 2 preproprotein 
AGTPBP1               0.019   ATP/GTP binding protein 1 
ST6GALNAC6            0.016   sialytransferase 7F 
ENPP6                 0.016   ectonucleotide pyrophosphatase/phosphodiesterase 6 [...
N4BP2                 0.009   Nedd4 binding protein 2 
LRWD1                 0.009   leucine-rich repeats and WD repeat domain containing...
GRK5                  0.006   G protein-coupled receptor kinase 5 
PARP15                0.006   poly (ADP-ribose) polymerase family, member 15 isofo...
PARP15                0.006   poly (ADP-ribose) polymerase family, member 15 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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