Search of human proteins with 169209840

Search of human proteins with 169209840

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169209840 PREDICTED: hypothetical protein [Homo sapiens]
         (99 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169210203 PREDICTED: hypothetical protein [Homo sapiens]           205   7e-54
gi|169209840 PREDICTED: hypothetical protein [Homo sapiens]           205   7e-54
gi|169210350 PREDICTED: hypothetical protein [Homo sapiens]           139   5e-34
gi|113426339 PREDICTED: hypothetical protein [Homo sapiens]           139   5e-34
gi|113426005 PREDICTED: hypothetical protein [Homo sapiens]           139   5e-34
gi|22094135 DOT1-like, histone H3 methyltransferase [Homo sapiens]     36   0.008
gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]     35   0.010
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    35   0.013
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             34   0.029
gi|157671951 solute carrier family 4, anion exchanger, member 3 ...    33   0.037
gi|157671953 solute carrier family 4, anion exchanger, member 3 ...    33   0.037
gi|217416343 fibrosin-like 1 [Homo sapiens]                            33   0.064
gi|46409372 G protein-coupled receptor 153 [Homo sapiens]              33   0.064
gi|239757439 PREDICTED: hypothetical protein [Homo sapiens]            32   0.083
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]            32   0.083
gi|239752488 PREDICTED: FLJ40296 protein family member [Homo sap...    32   0.083
gi|239752057 PREDICTED: hypothetical protein XP_002348077 [Homo ...    32   0.083
gi|239751956 PREDICTED: hypothetical protein [Homo sapiens]            32   0.083
gi|239746439 PREDICTED: hypothetical protein XP_002344222 [Homo ...    32   0.083
gi|163644325 MCF.2 cell line derived transforming sequence-like ...    32   0.083
gi|163644323 MCF.2 cell line derived transforming sequence-like ...    32   0.083
gi|38348198 proline rich 20 [Homo sapiens]                             32   0.083
gi|210031154 zinc finger protein 541 [Homo sapiens]                    32   0.083
gi|194353955 hypothetical protein LOC729250 [Homo sapiens]             32   0.083
gi|194353953 hypothetical protein LOC729246 [Homo sapiens]             32   0.083
gi|194353951 hypothetical protein LOC729240 [Homo sapiens]             32   0.083
gi|194353949 hypothetical protein LOC729233 [Homo sapiens]             32   0.083
gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens]                  32   0.083
gi|169210481 PREDICTED: hypothetical protein [Homo sapiens]            32   0.14 
gi|169210045 PREDICTED: hypothetical protein [Homo sapiens]            32   0.14 

>gi|169210203 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 99

 Score =  205 bits (521), Expect = 7e-54
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1  MRRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSA 60
          MRRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSA
Sbjct: 1  MRRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSA 60

Query: 61 RRAATVARHAGSERRGRPRRAWGERRVLSAGRGRERRGR 99
          RRAATVARHAGSERRGRPRRAWGERRVLSAGRGRERRGR
Sbjct: 61 RRAATVARHAGSERRGRPRRAWGERRVLSAGRGRERRGR 99


>gi|169209840 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 99

 Score =  205 bits (521), Expect = 7e-54
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1  MRRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSA 60
          MRRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSA
Sbjct: 1  MRRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSA 60

Query: 61 RRAATVARHAGSERRGRPRRAWGERRVLSAGRGRERRGR 99
          RRAATVARHAGSERRGRPRRAWGERRVLSAGRGRERRGR
Sbjct: 61 RRAATVARHAGSERRGRPRRAWGERRVLSAGRGRERRGR 99


>gi|169210350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score =  139 bits (350), Expect = 5e-34
 Identities = 68/75 (90%), Positives = 68/75 (90%)

Query: 2   RRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSAR 61
           RRRERRGEREADEG  TS PGPCAAH AGAPEDEDDEEQAVAAAPHAH ATASPPPGSAR
Sbjct: 48  RRRERRGEREADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSAR 107

Query: 62  RAATVARHAGSERRG 76
           RAA VARHAGSE RG
Sbjct: 108 RAAAVARHAGSEGRG 122


>gi|113426339 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score =  139 bits (350), Expect = 5e-34
 Identities = 68/75 (90%), Positives = 68/75 (90%)

Query: 2   RRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSAR 61
           RRRERRGEREADEG  TS PGPCAAH AGAPEDEDDEEQAVAAAPHAH ATASPPPGSAR
Sbjct: 48  RRRERRGEREADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSAR 107

Query: 62  RAATVARHAGSERRG 76
           RAA VARHAGSE RG
Sbjct: 108 RAAAVARHAGSEGRG 122


>gi|113426005 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score =  139 bits (350), Expect = 5e-34
 Identities = 68/75 (90%), Positives = 68/75 (90%)

Query: 2   RRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSAR 61
           RRRERRGEREADEG  TS PGPCAAH AGAPEDEDDEEQAVAAAPHAH ATASPPPGSAR
Sbjct: 48  RRRERRGEREADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSAR 107

Query: 62  RAATVARHAGSERRG 76
           RAA VARHAGSE RG
Sbjct: 108 RAAAVARHAGSEGRG 122


>gi|22094135 DOT1-like, histone H3 methyltransferase [Homo sapiens]
          Length = 1537

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 2   RRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSAR 61
           RRR++R E +++   PT  P    A  A AP D   EE+   AA         P P  AR
Sbjct: 342 RRRQQR-ESKSNAATPTKGPEGKVAGPADAPMDSGAEEEKAGAA-----TVKKPSPSKAR 395

Query: 62  RAA--TVARHAGSERRGRPRR 80
           +       R     +RGRP++
Sbjct: 396 KKKLNKKGRKMAGRKRGRPKK 416



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)

Query: 28   DAGAPEDEDDEEQAVA--------AAPHAHKATASPPPGSARRAATVARHAGSERRGRPR 79
            D+G  + E + ++ +         +A  +  +  SP   SAR     +    S RRGR +
Sbjct: 1031 DSGFSDPESEAKRRIVFTITTGAGSAKQSPSSKHSPLTASARGDCVPSHGQDSRRRGRRK 1090

Query: 80   RAWGERRVLSAGRGRERR 97
            RA      LSAG   +RR
Sbjct: 1091 RASAGTPSLSAGVSPKRR 1108


>gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]
          Length = 474

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 11  EADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGS 59
           E  EG P  L G CA  +A APE     E  ++ +P A  A   P PG+
Sbjct: 213 EGQEGLP--LTGACAGGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGA 259


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 14   EGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSARRA 63
            E      PGP  A + G  EDED+EE   AAAP A  A     PG AR A
Sbjct: 1293 EAGGAGAPGP--AEEDGEDEDEDEEEDEEAAAPGA--AAGPRGPGRARAA 1338


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 33.9 bits (76), Expect = 0.029
 Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 3/94 (3%)

Query: 7   RGEREADEGAPTSLPGPCAAHDAGAPEDEDDE-EQAVAAAPHAHKATASPPPGSARRAAT 65
           R    +D G+    PGP    + G+        ++A    P A  A+ SP PG+  R   
Sbjct: 425 RARSSSDSGSGRGAPGP--GPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGG 482

Query: 66  VARHAGSERRGRPRRAWGERRVLSAGRGRERRGR 99
               + S   G   R+W   R  S  R R    R
Sbjct: 483 PEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKR 516


>gi|157671951 solute carrier family 4, anion exchanger, member 3
           isoform 1 [Homo sapiens]
          Length = 1232

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 23/89 (25%), Positives = 36/89 (40%)

Query: 3   RRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSARR 62
           R  RR  ++    AP S   P    + GA  DE++EE+         +    PP G+ ++
Sbjct: 104 RHTRRKRKKEKTSAPPSEGTPPIQEEGGAGVDEEEEEEEEEEGESEAEPVEPPPSGTPQK 163

Query: 63  AATVARHAGSERRGRPRRAWGERRVLSAG 91
           A         +  G P RA   + + S G
Sbjct: 164 AKFSIGSDEDDSPGLPGRAAVTKPLPSVG 192


>gi|157671953 solute carrier family 4, anion exchanger, member 3
           isoform 2 [Homo sapiens]
          Length = 1259

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 23/89 (25%), Positives = 36/89 (40%)

Query: 3   RRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSARR 62
           R  RR  ++    AP S   P    + GA  DE++EE+         +    PP G+ ++
Sbjct: 104 RHTRRKRKKEKTSAPPSEGTPPIQEEGGAGVDEEEEEEEEEEGESEAEPVEPPPSGTPQK 163

Query: 63  AATVARHAGSERRGRPRRAWGERRVLSAG 91
           A         +  G P RA   + + S G
Sbjct: 164 AKFSIGSDEDDSPGLPGRAAVTKPLPSVG 192


>gi|217416343 fibrosin-like 1 [Homo sapiens]
          Length = 1045

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 19/57 (33%), Positives = 22/57 (38%)

Query: 5   ERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSAR 61
           ER  E  A+   PT+ P P AA   G P             P  H+ T  PPP   R
Sbjct: 251 ERSRELSAESFLPTASPAPHAAPCPGPPPGSRANPLVKKEPPAPHRHTPQPPPPQPR 307



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/92 (26%), Positives = 31/92 (33%), Gaps = 14/92 (15%)

Query: 15  GAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKAT--------------ASPPPGSA 60
           GAP          ++ +P  E+  +    A+P   KA               AS PP   
Sbjct: 814 GAPAEREAEPRVKESRSPAKEEAAKMPARASPPHSKAAPGDVKVKEERGEDEASEPPAGG 873

Query: 61  RRAATVARHAGSERRGRPRRAWGERRVLSAGR 92
              A +    G ER G P  AW   R L   R
Sbjct: 874 LHPAPLQLGLGRERLGAPGFAWEPFRGLELPR 905


>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
          Length = 609

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 23/109 (21%)

Query: 7   RGEREADEGAPTSLPGP-------CAAHDAGAPEDEDDEEQAV-----------AAAPHA 48
           RG R++  G+P   PGP           DA A    + E QA+           AA   A
Sbjct: 473 RGARDSPPGSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGA 532

Query: 49  HKATASPPPGSARRA----ATVARHAGSERRGRPRRAWGERRVLSAGRG 93
               A  PP SA+R+     +   HAGS R G    +WGE   L A  G
Sbjct: 533 DPGEAPTPPSSAQRSPGPRPSAHSHAGSLRPGL-SASWGEPGGLRAAGG 580


>gi|239757439 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 243

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 41  AVAAAPHAHKATASPPPGSARRAATVARHAGSERRGRPRRA---WGERRVLSA--GRGRE 95
           A +  PH  +    PP       AT+   AG   RG P R    W ERRV ++  GRG E
Sbjct: 140 AASCLPHPGQPFIEPPLPIGPHPATLPV-AGQSGRGWPSRGGGHWAERRVSTSANGRGEE 198

Query: 96  RRG 98
            RG
Sbjct: 199 LRG 201


>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 370

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 21  PGPCAAHDAGAPEDEDD--EEQAVAAAPHAHKATA-SPPPGSARRAATVARHAGSERRGR 77
           PGP      G PE+ED    + +  A P    +TA +  PG+ R A  +A  AG  R+  
Sbjct: 272 PGPIVG---GRPENEDSLASQTSPPAPPAPVPSTARARSPGARRGARELAPRAGRRRQPS 328

Query: 78  PRRAWGERRVLSAGRGRE 95
            R +W  RR     R RE
Sbjct: 329 GRTSW-RRRARREQRDRE 345


>gi|239752488 PREDICTED: FLJ40296 protein family member [Homo
          sapiens]
          Length = 221

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 16/78 (20%)

Query: 15 GAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAH---------KATASPPPGSARRAAT 65
          G P   PG C A   G+ E +   + A  A P A+             SPPP    R   
Sbjct: 20 GGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPARPESPPPAERGR--- 76

Query: 66 VARHAGSER--RGRPRRA 81
            R  GS R  RGR RRA
Sbjct: 77 --RRGGSRRPGRGRGRRA 92


>gi|239752057 PREDICTED: hypothetical protein XP_002348077 [Homo
          sapiens]
          Length = 344

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 30/94 (31%), Positives = 33/94 (35%), Gaps = 12/94 (12%)

Query: 3  RRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSARR 62
          RR R        GAP+   GP AA  A AP           AAP A     SPPP     
Sbjct: 8  RRTRTAGLARASGAPS---GPAAAAAAPAPS---------LAAPSARALAPSPPPDLLEV 55

Query: 63 AATVARHAGSERRGRPRRAWGERRVLSAGRGRER 96
              A   G +R        G R  L+A R   R
Sbjct: 56 DVAQAGRVGRQRGRAQHGVHGRRAPLTARREAAR 89


>gi|239751956 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 243

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 41  AVAAAPHAHKATASPPPGSARRAATVARHAGSERRGRPRRA---WGERRVLSA--GRGRE 95
           A +  PH  +    PP       AT+   AG   RG P R    W ERRV ++  GRG E
Sbjct: 140 AASCLPHPGQPFIEPPLPIGPHPATLPV-AGQSGRGWPSRGGGHWAERRVSTSANGRGEE 198

Query: 96  RRG 98
            RG
Sbjct: 199 LRG 201


>gi|239746439 PREDICTED: hypothetical protein XP_002344222 [Homo
           sapiens]
          Length = 243

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 41  AVAAAPHAHKATASPPPGSARRAATVARHAGSERRGRPRRA---WGERRVLSA--GRGRE 95
           A +  PH  +    PP       AT+   AG   RG P R    W ERRV ++  GRG E
Sbjct: 140 AASCLPHPGQPFIEPPLPIGPHPATLPV-AGQSGRGWPSRGGGHWAERRVSTSANGRGEE 198

Query: 96  RRG 98
            RG
Sbjct: 199 LRG 201


>gi|163644325 MCF.2 cell line derived transforming sequence-like
           isoform a [Homo sapiens]
          Length = 1182

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 20/54 (37%), Positives = 24/54 (44%)

Query: 40  QAVAAAPHAHKATASPPPGSARRAATVARHAGSERRGRPRRAWGERRVLSAGRG 93
           Q VA  P A   +  P PG  R +   +   G+ RRG  RRA  E      GRG
Sbjct: 593 QPVAPRPEALAKSPCPSPGIRRGSENSSSEGGALRRGPYRRAKSEMSESRQGRG 646


>gi|163644323 MCF.2 cell line derived transforming sequence-like
           isoform b [Homo sapiens]
          Length = 1129

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 20/54 (37%), Positives = 24/54 (44%)

Query: 40  QAVAAAPHAHKATASPPPGSARRAATVARHAGSERRGRPRRAWGERRVLSAGRG 93
           Q VA  P A   +  P PG  R +   +   G+ RRG  RRA  E      GRG
Sbjct: 540 QPVAPRPEALAKSPCPSPGIRRGSENSSSEGGALRRGPYRRAKSEMSESRQGRG 593


>gi|38348198 proline rich 20 [Homo sapiens]
          Length = 221

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 16/78 (20%)

Query: 15 GAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAH---------KATASPPPGSARRAAT 65
          G P   PG C A   G+ E +   + A  A P A+             SPPP    R   
Sbjct: 20 GGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPARPESPPPAERGR--- 76

Query: 66 VARHAGSER--RGRPRRA 81
            R  GS R  RGR RRA
Sbjct: 77 --RRGGSRRPGRGRGRRA 92


>gi|210031154 zinc finger protein 541 [Homo sapiens]
          Length = 1365

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 12/24 (50%), Positives = 16/24 (66%)

Query: 38  EEQAVAAAPHAHKATASPPPGSAR 61
           EE+A   +PHAH++   PPP S R
Sbjct: 232 EEEACGDSPHAHESAGQPPPSSLR 255


>gi|194353955 hypothetical protein LOC729250 [Homo sapiens]
          Length = 221

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 16/78 (20%)

Query: 15 GAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAH---------KATASPPPGSARRAAT 65
          G P   PG C A   G+ E +   + A  A P A+             SPPP    R   
Sbjct: 20 GGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPARPESPPPAERGR--- 76

Query: 66 VARHAGSER--RGRPRRA 81
            R  GS R  RGR RRA
Sbjct: 77 --RRGGSRRPGRGRGRRA 92


>gi|194353953 hypothetical protein LOC729246 [Homo sapiens]
          Length = 221

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 16/78 (20%)

Query: 15 GAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAH---------KATASPPPGSARRAAT 65
          G P   PG C A   G+ E +   + A  A P A+             SPPP    R   
Sbjct: 20 GGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPARPESPPPAERGR--- 76

Query: 66 VARHAGSER--RGRPRRA 81
            R  GS R  RGR RRA
Sbjct: 77 --RRGGSRRPGRGRGRRA 92


>gi|194353951 hypothetical protein LOC729240 [Homo sapiens]
          Length = 221

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 16/78 (20%)

Query: 15 GAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAH---------KATASPPPGSARRAAT 65
          G P   PG C A   G+ E +   + A  A P A+             SPPP    R   
Sbjct: 20 GGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPARPESPPPAERGR--- 76

Query: 66 VARHAGSER--RGRPRRA 81
            R  GS R  RGR RRA
Sbjct: 77 --RRGGSRRPGRGRGRRA 92


>gi|194353949 hypothetical protein LOC729233 [Homo sapiens]
          Length = 221

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 16/78 (20%)

Query: 15 GAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAH---------KATASPPPGSARRAAT 65
          G P   PG C A   G+ E +   + A  A P A+             SPPP    R   
Sbjct: 20 GGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPARPESPPPAERGR--- 76

Query: 66 VARHAGSER--RGRPRRA 81
            R  GS R  RGR RRA
Sbjct: 77 --RRGGSRRPGRGRGRRA 92


>gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens]
          Length = 689

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 10  READEGAPTSLPGPCAA-HDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSARRAATVAR 68
           RE+   A TS  GP A  H  G P+ +   E  ++  P      A+PP     R      
Sbjct: 67  RESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPP----GRAAPPDVGEERRGGGGT 122

Query: 69  HAGSERRGRPRRAWGERRVLSAGRGRER 96
             G     RPR  +   R    G G+ R
Sbjct: 123 ELGPPAPPRPRNGYQPHRPPGGGGGKRR 150


>gi|169210481 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 143

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 10/63 (15%)

Query: 4  RERRGEREADEGAPTSLPGPCAAHDAGA----------PEDEDDEEQAVAAAPHAHKATA 53
          R RRG    D     ++ GPC A   GA          P D    E    +APH  +   
Sbjct: 13 RARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTSAPHPRRPAG 72

Query: 54 SPP 56
          SPP
Sbjct: 73 SPP 75


>gi|169210045 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 143

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 10/63 (15%)

Query: 4  RERRGEREADEGAPTSLPGPCAAHDAGA----------PEDEDDEEQAVAAAPHAHKATA 53
          R RRG    D     ++ GPC A   GA          P D    E    +APH  +   
Sbjct: 13 RARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTSAPHPRRPAG 72

Query: 54 SPP 56
          SPP
Sbjct: 73 SPP 75


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.128    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,139,106
Number of Sequences: 37866
Number of extensions: 291837
Number of successful extensions: 2386
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 2128
Number of HSP's gapped (non-prelim): 491
length of query: 99
length of database: 18,247,518
effective HSP length: 70
effective length of query: 29
effective length of database: 15,596,898
effective search space: 452310042
effective search space used: 452310042
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.