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Search of human proteins with 169209319
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169209319 PREDICTED: hypothetical protein [Homo sapiens]
(128 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169209126 PREDICTED: hypothetical protein [Homo sapiens] 271 1e-73
gi|169209319 PREDICTED: hypothetical protein [Homo sapiens] 271 1e-73
gi|169208294 PREDICTED: hypothetical protein [Homo sapiens] 271 1e-73
gi|124249376 proline rich 21 [Homo sapiens] 44 4e-05
gi|239748030 PREDICTED: hypothetical protein XP_002346496 [Homo ... 42 1e-04
gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo sa... 31 0.23
gi|78486540 DDB1 and CUL4 associated factor 15 [Homo sapiens] 29 1.1
gi|239748281 PREDICTED: hypothetical protein [Homo sapiens] 29 1.1
gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo ... 29 1.1
gi|239744036 PREDICTED: hypothetical protein XP_002343022 [Homo ... 28 2.0
gi|154350236 hypothetical protein LOC56204 [Homo sapiens] 28 2.0
gi|145046269 rotatin [Homo sapiens] 28 2.0
gi|239755656 PREDICTED: hypothetical protein [Homo sapiens] 27 4.4
gi|239750182 PREDICTED: hypothetical protein [Homo sapiens] 27 4.4
gi|52317132 olfactory receptor, family 5, subfamily T, member 1 ... 27 5.7
gi|239741321 PREDICTED: hypothetical protein XP_002342193 [Homo ... 26 7.4
>gi|169209126 PREDICTED: hypothetical protein [Homo sapiens]
Length = 128
Score = 271 bits (693), Expect = 1e-73
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MGTRSFCPIMGTRSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTL 60
MGTRSFCPIMGTRSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTL
Sbjct: 1 MGTRSFCPIMGTRSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTL 60
Query: 61 LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD 120
LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD
Sbjct: 61 LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD 120
Query: 121 RWAHAPSA 128
RWAHAPSA
Sbjct: 121 RWAHAPSA 128
>gi|169209319 PREDICTED: hypothetical protein [Homo sapiens]
Length = 128
Score = 271 bits (693), Expect = 1e-73
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MGTRSFCPIMGTRSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTL 60
MGTRSFCPIMGTRSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTL
Sbjct: 1 MGTRSFCPIMGTRSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTL 60
Query: 61 LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD 120
LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD
Sbjct: 61 LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD 120
Query: 121 RWAHAPSA 128
RWAHAPSA
Sbjct: 121 RWAHAPSA 128
>gi|169208294 PREDICTED: hypothetical protein [Homo sapiens]
Length = 128
Score = 271 bits (693), Expect = 1e-73
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MGTRSFCPIMGTRSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTL 60
MGTRSFCPIMGTRSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTL
Sbjct: 1 MGTRSFCPIMGTRSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTL 60
Query: 61 LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD 120
LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD
Sbjct: 61 LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD 120
Query: 121 RWAHAPSA 128
RWAHAPSA
Sbjct: 121 RWAHAPSA 128
>gi|124249376 proline rich 21 [Homo sapiens]
Length = 389
Score = 43.5 bits (101), Expect = 4e-05
Identities = 37/113 (32%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 21 STLLLPNHWAHAPSARSLGSRSFCPI-----LGARSFCPIVGRTLLLPDRWAHAPSARSL 75
ST L P + H S SL R F L R F T L P + H PS+ L
Sbjct: 61 STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 120
Query: 76 GARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPSA 128
R F T L P + H PS+ L R F T L P + H PS+
Sbjct: 121 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSS 173
Score = 43.5 bits (101), Expect = 4e-05
Identities = 38/116 (32%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 13 RSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDRWAHAPSA 72
R F T L P + H PS+ L R P L A S T L P + H PS+
Sbjct: 123 RPFVHASSPTALPPCLFTHGPSSMPLHPR---PFLHASS------PTALPPCLFTHGPSS 173
Query: 73 RSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPSA 128
L R F T L P + H PS+ L R F T L P + H PS+
Sbjct: 174 MPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSS 229
Score = 43.1 bits (100), Expect = 6e-05
Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 13 RSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDRWAHAPSA 72
R F T L P + H PS+ L R P + A S T L P + H PS+
Sbjct: 179 RPFVHASSPTALRPCLFTHGPSSMPLHPR---PFVHASS------PTALPPCLFTHGPSS 229
Query: 73 RSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPSA 128
L R F T L P + H PS+ L R F T L P + H PS+
Sbjct: 230 MPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSS 285
Score = 43.1 bits (100), Expect = 6e-05
Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 13 RSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDRWAHAPSA 72
R F T L P + H PS+ L R P + A S T L P + H PS+
Sbjct: 207 RPFVHASSPTALPPCLFTHGPSSMPLHPR---PFVHASS------PTALRPCLFTHGPSS 257
Query: 73 RSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPSA 128
L R F T L P + H PS+ L R F T L P + H PS+
Sbjct: 258 MPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSS 313
Score = 42.7 bits (99), Expect = 8e-05
Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 13 RSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDRWAHAPSA 72
R F T L P + H PS+ L R P + A S T L P + H PS+
Sbjct: 95 RPFVHASSPTALRPCLFTHGPSSMPLHPR---PFVHASS------PTALPPCLFTHGPSS 145
Query: 73 RSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPSA 128
L R F T L P + H PS+ L R F T L P + H PS+
Sbjct: 146 MPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSS 201
Score = 42.7 bits (99), Expect = 8e-05
Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 13 RSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDRWAHAPSA 72
R F T L P + H PS+ L R P + A S T L P + H PS+
Sbjct: 151 RPFLHASSPTALPPCLFTHGPSSMPLHPR---PFVHASS------PTALRPCLFTHGPSS 201
Query: 73 RSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPSA 128
L R F T L P + H PS+ L R F T L P + H PS+
Sbjct: 202 MPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSS 257
Score = 42.7 bits (99), Expect = 8e-05
Identities = 38/116 (32%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 13 RSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDRWAHAPSA 72
R F T L P + H PS+ L R P L A S T L P + H PS+
Sbjct: 235 RPFVHASSPTALRPCLFTHGPSSMPLHPR---PFLHASS------PTALRPCLFTHGPSS 285
Query: 73 RSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPSA 128
L R F T L P + H PS+ L R F T L P + HA S+
Sbjct: 286 MPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFIHASSS 341
Score = 41.6 bits (96), Expect = 2e-04
Identities = 40/117 (34%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 13 RSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDRWAHAPSA 72
R F T L P + H PS+ L R P + A S T L P + H PS+
Sbjct: 263 RPFLHASSPTALRPCLFTHGPSSMPLHPR---PFVHASS------PTALRPCLFTHGPSS 313
Query: 73 RSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFF----CLI----VGRTLLLPDR 121
L R F ST L P + HA S++SL R F CL+ G LLL R
Sbjct: 314 MPLHPRPFVHASSSTSLHPRPFIHASSSKSLHLRLFSHSSCLVGFSQQGNVLLLSAR 370
Score = 30.4 bits (67), Expect = 0.39
Identities = 31/101 (30%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 31 HAPSARSLGSRSFCPILGARSFC----PIVGRTLLLPDRWAHAPSARSLGARSFCPIVGS 86
HA S+ +L R F +F P T L P + H S +L R F S
Sbjct: 2 HACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPSS 61
Query: 87 TLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPS 127
T L P + H S SL R F L P + HA S
Sbjct: 62 TALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASS 102
Score = 30.4 bits (67), Expect = 0.39
Identities = 21/68 (30%), Positives = 29/68 (42%)
Query: 61 LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD 120
L P + H PS+ +L F L P + H+PS+ L R F T L P
Sbjct: 50 LHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPC 109
Query: 121 RWAHAPSA 128
+ H PS+
Sbjct: 110 LFTHGPSS 117
>gi|239748030 PREDICTED: hypothetical protein XP_002346496 [Homo
sapiens]
Length = 221
Score = 42.0 bits (97), Expect = 1e-04
Identities = 37/113 (32%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 21 STLLLPNHWAHAPSARSLGSRSFCPI-----LGARSFCPIVGRTLLLPDRWAHAPSARSL 75
ST L P + H S SL R F L R F T L P + H PS+ L
Sbjct: 61 STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 120
Query: 76 GARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPSA 128
R F T L P + H PS+ L R F T L P + HA S+
Sbjct: 121 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSSTSLHPRPFIHASSS 173
Score = 41.2 bits (95), Expect = 2e-04
Identities = 40/117 (34%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 13 RSFCPIVGSTLLLPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDRWAHAPSA 72
R F T L P + H PS+ L R P + A S T L P + H PS+
Sbjct: 95 RPFVHASSPTALRPCLFTHGPSSMPLHPR---PFVHASS------PTALPPCLFTHGPSS 145
Query: 73 RSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFF----CLI----VGRTLLLPDR 121
L R F ST L P + HA S++SL R F CL+ G LLL R
Sbjct: 146 MPLHPRPFLHASSSTSLHPRPFIHASSSKSLHLRLFSHSSCLVGFSQQGNVLLLSAR 202
Score = 30.4 bits (67), Expect = 0.39
Identities = 31/101 (30%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 31 HAPSARSLGSRSFCPILGARSFC----PIVGRTLLLPDRWAHAPSARSLGARSFCPIVGS 86
HA S+ +L R F +F P T L P + H S +L R F S
Sbjct: 2 HACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPSS 61
Query: 87 TLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPDRWAHAPS 127
T L P + H S SL R F L P + HA S
Sbjct: 62 TALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASS 102
Score = 30.4 bits (67), Expect = 0.39
Identities = 21/68 (30%), Positives = 29/68 (42%)
Query: 61 LLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRTLLLPD 120
L P + H PS+ +L F L P + H+PS+ L R F T L P
Sbjct: 50 LHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPC 109
Query: 121 RWAHAPSA 128
+ H PS+
Sbjct: 110 LFTHGPSS 117
>gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo
sapiens]
Length = 1067
Score = 31.2 bits (69), Expect = 0.23
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 26 PNHWAHAPSARSLGSRSFCPI-LGARSFCPIV----GRTLLLPDRWAHAPSARSLGARSF 80
P HWA P R+ S + G R P V G + L P RWA P R++ S
Sbjct: 154 PRHWASPPHKRATPSSLAHSVGCGMRGKAPTVSGQDGYSGLQPRRWAGPPHKRAVPRSSL 213
Query: 81 CPIVGS 86
I GS
Sbjct: 214 ARIGGS 219
>gi|78486540 DDB1 and CUL4 associated factor 15 [Homo sapiens]
Length = 600
Score = 28.9 bits (63), Expect = 1.1
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 30 AHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDRWAHAPSARSLGARSFCP 82
A A S S G RSFC IL S CP+ + P P+ SFCP
Sbjct: 253 ACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPA-----LPSFCP 300
Score = 26.6 bits (57), Expect = 5.7
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Query: 2 GTRSFCPIMGTRSFCPIVGST----------LLLPNHWAHAPSARSLGSRSFCPIL 47
G RSFC I+ S CP+ ++ LP+ A ARS GS P +
Sbjct: 262 GDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAI 317
>gi|239748281 PREDICTED: hypothetical protein [Homo sapiens]
Length = 242
Score = 28.9 bits (63), Expect = 1.1
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 36 RSLGSRSFCPILGARSFCP--IVGRTLL--LPDRWAHAPSARSLGARSFCPIVGSTLLLP 91
R G+R+ P G+R P + GR + PDR H A S GAR +VG + P
Sbjct: 145 RGGGARAPGPGPGSRQPLPAGLHGRRKVGSAPDR--HGLGAGSAGARGNKAVVGPSPPPP 202
Query: 92 DRWAHAPSARSLGAR 106
R H+ S LGAR
Sbjct: 203 GRRLHSGSESRLGAR 217
>gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo
sapiens]
Length = 242
Score = 28.9 bits (63), Expect = 1.1
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 36 RSLGSRSFCPILGARSFCP--IVGRTLL--LPDRWAHAPSARSLGARSFCPIVGSTLLLP 91
R G+R+ P G+R P + GR + PDR H A S GAR +VG + P
Sbjct: 145 RGGGARAPGPGPGSRQPLPAGLHGRRKVGSAPDR--HGLGAGSAGARGNKAVVGPSPPPP 202
Query: 92 DRWAHAPSARSLGAR 106
R H+ S LGAR
Sbjct: 203 GRRLHSGSESRLGAR 217
>gi|239744036 PREDICTED: hypothetical protein XP_002343022 [Homo
sapiens]
Length = 686
Score = 28.1 bits (61), Expect = 2.0
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 25 LPNHWAHAPSARSLGSRSFCPILGARSFCPIVGRTLLLPDR-WAHAPSARSLGARSFCP 82
LP W AP+ S +FC A +FCP L P R +A + A FCP
Sbjct: 322 LPQPWLFAPT-----SEAFCRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFAPEATPFCP 375
>gi|154350236 hypothetical protein LOC56204 [Homo sapiens]
Length = 1076
Score = 28.1 bits (61), Expect = 2.0
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 54 PIVGRTLLLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVG 113
PI+ +LLPD + G P + LL +RW P R G RF I
Sbjct: 87 PIMVEMMLLPDCCYSDDGPTTEGIDLNDPAIKQDALLLERWILEPVPRQNGDRF---IEE 143
Query: 114 RTLLLPDR 121
+TLLL R
Sbjct: 144 KTLLLAVR 151
>gi|145046269 rotatin [Homo sapiens]
Length = 2226
Score = 28.1 bits (61), Expect = 2.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 33 PSARSLGSRSFCPILGARSFCPIVGRTLLLPD 64
PS+ S + P LG+ F P+V T LLP+
Sbjct: 1542 PSSLSTSETTVAPSLGSTEFQPLVQSTTLLPE 1573
Score = 25.8 bits (55), Expect = 9.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 72 ARSLGARSFCPIVGSTLLLPD 92
A SLG+ F P+V ST LLP+
Sbjct: 1553 APSLGSTEFQPLVQSTTLLPE 1573
>gi|239755656 PREDICTED: hypothetical protein [Homo sapiens]
Length = 522
Score = 26.9 bits (58), Expect = 4.4
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 48 GARSFCPIVGRTLLLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARS-LGAR 106
G R CP L LP P LGA + PI + LLL + S RS L R
Sbjct: 336 GVRQQCP-----LCLPLSLQQCPLHFGLGADTRVPIKAADLLLHSSLRFSSSERSILSHR 390
Query: 107 FFCLIVGRTLLLPD 120
+ G +LL P+
Sbjct: 391 RWVATPGSSLLRPE 404
>gi|239750182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 522
Score = 26.9 bits (58), Expect = 4.4
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 48 GARSFCPIVGRTLLLPDRWAHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARS-LGAR 106
G R CP L LP P LGA + PI + LLL + S RS L R
Sbjct: 336 GVRQQCP-----LCLPLSLQQCPLHFGLGADTRVPIKAADLLLHSSLRFSSSERSILSHR 390
Query: 107 FFCLIVGRTLLLPD 120
+ G +LL P+
Sbjct: 391 RWVATPGSSLLRPE 404
>gi|52317132 olfactory receptor, family 5, subfamily T, member 1
[Homo sapiens]
Length = 326
Score = 26.6 bits (57), Expect = 5.7
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 54 PIVGRTLLLPDRWAHAPSARSLGARSFCPIVGSTLLLP 91
PI+G D W H+P LG SF + ST++ P
Sbjct: 60 PIIG------DFWLHSPMYYFLGVLSFLDVCYSTVVTP 91
>gi|239741321 PREDICTED: hypothetical protein XP_002342193 [Homo
sapiens]
Length = 123
Score = 26.2 bits (56), Expect = 7.4
Identities = 16/49 (32%), Positives = 21/49 (42%)
Query: 67 AHAPSARSLGARSFCPIVGSTLLLPDRWAHAPSARSLGARFFCLIVGRT 115
A AP R+L FCP S+L W ++ A FF +G T
Sbjct: 56 APAPQPRALSPPRFCPPPLSSLCTSPPWLPLSPELTVDAGFFRTPLGNT 104
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.140 0.484
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,273,365
Number of Sequences: 37866
Number of extensions: 232766
Number of successful extensions: 626
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 531
Number of HSP's gapped (non-prelim): 35
length of query: 128
length of database: 18,247,518
effective HSP length: 90
effective length of query: 38
effective length of database: 14,839,578
effective search space: 563903964
effective search space used: 563903964
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.