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Search of human proteins with 169209217
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169209217 PREDICTED: similar to hCG2042704 [Homo sapiens]
(511 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169209217 PREDICTED: similar to hCG2042704 [Homo sapiens] 1067 0.0
gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens] 1013 0.0
gi|169217959 PREDICTED: similar to hCG2042704, partial [Homo sap... 615 e-176
gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens] 589 e-168
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 159 7e-39
gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens] 66 7e-11
gi|73476377 LBXCOR1 homolog [Homo sapiens] 45 2e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 3e-04
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 42 0.001
gi|156416026 zinc finger protein 219 [Homo sapiens] 42 0.001
gi|156415998 zinc finger protein 219 [Homo sapiens] 42 0.001
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 42 0.001
gi|156415996 zinc finger protein 219 [Homo sapiens] 42 0.001
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 41 0.002
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 41 0.003
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 41 0.003
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 41 0.003
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 41 0.003
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 41 0.003
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 41 0.003
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 41 0.003
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 41 0.003
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 41 0.003
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 40 0.004
gi|7706687 Enah/Vasp-like [Homo sapiens] 40 0.004
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 40 0.005
gi|239749721 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|239743976 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|54607124 RNA binding motif protein 15B [Homo sapiens] 40 0.005
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 40 0.005
>gi|169209217 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 511
Score = 1067 bits (2759), Expect = 0.0
Identities = 511/511 (100%), Positives = 511/511 (100%)
Query: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPR 60
MGLGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPR
Sbjct: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPR 60
Query: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD
Sbjct: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
Query: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS 180
AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS
Sbjct: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS 180
Query: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSSLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
ELPSPQRVEFLCGLLDLCMPLEVRFFGSSLEDLARKDYHSLRDSEIKANNPADLGSLTNL
Sbjct: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSSLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
Query: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ 300
TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ
Sbjct: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ 300
Query: 301 KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR 360
KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR
Sbjct: 301 KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR 360
Query: 361 TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW 420
TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW
Sbjct: 361 TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW 420
Query: 421 YLLLEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF 480
YLLLEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF
Sbjct: 421 YLLLEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF 480
Query: 481 MDTCMLYDSILCGPLAYVSVQGCPEGSCSTW 511
MDTCMLYDSILCGPLAYVSVQGCPEGSCSTW
Sbjct: 481 MDTCMLYDSILCGPLAYVSVQGCPEGSCSTW 511
>gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 618
Score = 1013 bits (2618), Expect = 0.0
Identities = 486/492 (98%), Positives = 487/492 (98%)
Query: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPR 60
MGLGTRHNHGRRTGRLSQSAREGGGWARPARA RRGGHPAHFCWSRPPVSRERDDPSAPR
Sbjct: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPR 60
Query: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD
Sbjct: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
Query: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS 180
AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS
Sbjct: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS 180
Query: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSSLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
ELPSPQRVEFLCGLLDLCMPLEVRFFGS LEDLARKDYHSLRDSEIKANNPADLGSLTNL
Sbjct: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
Query: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ 300
TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ
Sbjct: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNHRAFSFHQ 300
Query: 301 KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR 360
KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR
Sbjct: 301 KQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR 360
Query: 361 TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW 420
TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW
Sbjct: 361 TAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIW 420
Query: 421 YLLLEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF 480
YLLLEKEGAVAMPEAAGEVNIARHR SPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF
Sbjct: 421 YLLLEKEGAVAMPEAAGEVNIARHRPSPSELLTPYRWRPCLGPVLLGACARDVAVRVSSF 480
Query: 481 MDTCMLYDSILC 492
MDTCMLYD +C
Sbjct: 481 MDTCMLYDVRVC 492
>gi|169217959 PREDICTED: similar to hCG2042704, partial [Homo
sapiens]
Length = 300
Score = 615 bits (1586), Expect = e-176
Identities = 300/300 (100%), Positives = 300/300 (100%)
Query: 212 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 271
DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL
Sbjct: 1 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 60
Query: 272 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 331
THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV
Sbjct: 61 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 120
Query: 332 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 391
HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ
Sbjct: 121 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 180
Query: 392 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL 451
GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL
Sbjct: 181 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL 240
Query: 452 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILCGPLAYVSVQGCPEGSCSTW 511
LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILCGPLAYVSVQGCPEGSCSTW
Sbjct: 241 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILCGPLAYVSVQGCPEGSCSTW 300
>gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 317
Score = 589 bits (1518), Expect = e-168
Identities = 294/348 (84%), Positives = 294/348 (84%), Gaps = 51/348 (14%)
Query: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPR 60
MGLGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPR
Sbjct: 1 MGLGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPR 60
Query: 61 PVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCD 120
PVPALPSSPSPPPP RPFRGRGPHRSLGCD
Sbjct: 61 PVPALPSSPSPPPP-------------------------------RPFRGRGPHRSLGCD 89
Query: 121 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCW--------- 171
AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCW
Sbjct: 90 AAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWARAWAREGA 149
Query: 172 -----------RDGVYRWFSELPSPQRVEFLCGLLDLCMPLEVRFFGSSLEDLARKDYHS 220
RDGVYRWFSELPSPQRVEFLCGLLDLCMPLEVRFFGS LEDLARKDYHS
Sbjct: 150 SPVVEKRCPLQRDGVYRWFSELPSPQRVEFLCGLLDLCMPLEVRFFGSCLEDLARKDYHS 209
Query: 221 LRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTG 280
LRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTG
Sbjct: 210 LRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTG 269
Query: 281 DEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQA 328
DEFLLPFTMSSNHRAF FHQKQVL QELTQIQSSLNGGGGHLPGLPQA
Sbjct: 270 DEFLLPFTMSSNHRAFCFHQKQVLRQELTQIQSSLNGGGGHLPGLPQA 317
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 159 bits (401), Expect = 7e-39
Identities = 116/310 (37%), Positives = 142/310 (45%), Gaps = 74/310 (23%)
Query: 62 VPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDA 121
+P P+ P+ PPP A + G + P+ RDCR P RGP L
Sbjct: 6 LPLKPTHPAEPPPEAEEPEADARPGAKAPSRRRRDCRPPPPPPPPAGPSRGP---LPPPP 62
Query: 122 APAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPPPLPLTGRCWRDGVYRWFS- 180
P LG P GAG GGG P E VY WF
Sbjct: 63 PPRGLG---PPVAGGAAAGAGMPGGGGGPSAALREQER---------------VYEWFGL 104
Query: 181 ELPSPQRVEFLCGLLDLCMPLEVRFFGSSLEDLARKDYHSLRDSEIKANNPADLGSLTNL 240
L S QR+EF+CGLLDLC PLE+RF GS LEDLARKDYH LRDSE KAN +D G L +
Sbjct: 105 VLGSAQRLEFMCGLLDLCNPLELRFLGSCLEDLARKDYHYLRDSEAKANGLSDPGPLADF 164
Query: 241 TDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLN-----------EGRTG--------- 280
+ VRS+L+V LALLGSE EAAG L+R L ++ EG G
Sbjct: 165 REPAVRSRLIVYLALLGSENREAAGRLHRLLPQVDSVLKSLRAARGEGSRGGAEDERGED 224
Query: 281 --------------------------------DEFLLPFTMSSNHRAFSFHQKQVLCQEL 308
+E LL FTM+S H AFSFHQ+ L + L
Sbjct: 225 GDGEQDAEKDGSGPEGGIVEPRVGGGLGSRAQEELLLLFTMASLHPAFSFHQRVTLREHL 284
Query: 309 TQIQSSLNGG 318
+++++L GG
Sbjct: 285 ERLRAALRGG 294
>gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens]
Length = 949
Score = 66.2 bits (160), Expect = 7e-11
Identities = 39/62 (62%), Positives = 41/62 (66%), Gaps = 9/62 (14%)
Query: 289 MSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGH----LPG----LPQASTVHPKSPPRVP 340
M+SNH AFSFHQKQVL QELTQIQSSLNGGGGH PG LP H K PR
Sbjct: 1 MASNHPAFSFHQKQVLRQELTQIQSSLNGGGGHGGKGAPGPGGALPTCPACH-KITPRTE 59
Query: 341 SP 342
+P
Sbjct: 60 AP 61
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 44.7 bits (104), Expect = 2e-04
Identities = 41/137 (29%), Positives = 52/137 (37%), Gaps = 21/137 (15%)
Query: 45 SRPPVSRERDDPSAPRPVPALPSSPSPPPPVRRPS-------AAREQQGRQVPAGSLRDC 97
SR P+ + D + P P+ LP P PPPP R+ S ++ + GS R+
Sbjct: 514 SRGPLDEDGTDEALPPPLAPLP--PPPPPPARKGSYVSAFRPVVKDTESIAKLYGSAREA 571
Query: 98 RLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGARSDRPCGAGGD------GGGRLPG 151
A P RG GP G +P L G S P D R P
Sbjct: 572 YGAG-----PARGPGPGAGSGGYVSPDFLSEGSSSYNSASPDVDTADEPEVDVESNRFP- 625
Query: 152 DDDDNDEEQPPPLPLTG 168
DD+D EE P P G
Sbjct: 626 DDEDAQEETEPSAPSAG 642
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 43.9 bits (102), Expect = 3e-04
Identities = 52/191 (27%), Positives = 65/191 (34%), Gaps = 45/191 (23%)
Query: 4 GTRHNHGRRTGRLSQSAREGGGWARP-------ARAVRRGGHP--AHFCWSRP--PVSRE 52
G + R +G S S G GW P R+ GG P AH +P P R
Sbjct: 286 GRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRV 345
Query: 53 RDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRG 112
RD +A P P SP P R P+ R R A +R R R
Sbjct: 346 RDKAAAAAPTPPARGKESPSP-------------RSAPSSQGRGGRAAGGAGRRRRRRRR 392
Query: 113 PHRSLGCDAAPAALGNGRP---------------GARSDRPCGAGGDGGGRLPGDDDDND 157
RS +AP G RP + SD G G G G PG + +
Sbjct: 393 RRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHG 452
Query: 158 ------EEQPP 162
+E+PP
Sbjct: 453 GHGKRAKERPP 463
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 42.0 bits (97), Expect = 0.001
Identities = 45/139 (32%), Positives = 55/139 (39%), Gaps = 19/139 (13%)
Query: 36 GGHPAHFCWSRPPVSRERDDPSAPRPVPALPS-SPSPPPPVRRPSAAREQQGRQVPA-GS 93
GG H SR P +R PA P+ SP PP RP+ R Q VPA G+
Sbjct: 15 GGQGRHRHSSRAPGTR----------TPATPARSPRPPLCAPRPAPGRAQS--PVPAAGA 62
Query: 94 LRDCRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGAR---SDRPCGAGGDGGGRLP 150
+ A+ P + RG P + G G +P R S RP GG G GR
Sbjct: 63 VPSPPAAAHPARPALRGETP--APGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPG 120
Query: 151 GDDDDNDEEQPPPLPLTGR 169
N + PP P GR
Sbjct: 121 KGPPPNPSRRLPPAPPGGR 139
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 42.0 bits (97), Expect = 0.001
Identities = 51/181 (28%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 306 QELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS 365
QE + SL G L S P P P P P+P + +R A +
Sbjct: 200 QEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPT 259
Query: 366 PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAP----WFPQIWY 421
P P +P P PP+ R GQ Q +++G +R+ A A P F + W+
Sbjct: 260 PAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGH---MRKHKASFDHACPVCGRCFKEPWF 316
Query: 422 LL------LEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAV 475
L K G + P A AR P L Y LGP LL A A A
Sbjct: 317 LKNHMKVHASKLGPLRAPGPAS--GPARAPQPPDLGLLAYE---PLGPALLLAPAPTPAE 371
Query: 476 R 476
R
Sbjct: 372 R 372
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 42.0 bits (97), Expect = 0.001
Identities = 51/181 (28%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 306 QELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS 365
QE + SL G L S P P P P P+P + +R A +
Sbjct: 200 QEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPT 259
Query: 366 PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAP----WFPQIWY 421
P P +P P PP+ R GQ Q +++G +R+ A A P F + W+
Sbjct: 260 PAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGH---MRKHKASFDHACPVCGRCFKEPWF 316
Query: 422 LL------LEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAV 475
L K G + P A AR P L Y LGP LL A A A
Sbjct: 317 LKNHMKVHASKLGPLRAPGPAS--GPARAPQPPDLGLLAYE---PLGPALLLAPAPTPAE 371
Query: 476 R 476
R
Sbjct: 372 R 372
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 16/91 (17%)
Query: 11 RRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPRPVPALPSSPS 70
RR+ LS R+G P+R+ R +R P +R PS P P P + S
Sbjct: 651 RRSPSLSSKHRKGSS---PSRSTRE---------ARSPQPNKRHSPS---PRPRAPQTSS 695
Query: 71 PPPPVRRPSAAREQQGRQVPAGSLRDCRLAS 101
PPPVRR A+ Q RQ P+ S R R S
Sbjct: 696 SPPPVRR-GASSSPQRRQSPSPSTRPIRRVS 725
Score = 32.7 bits (73), Expect = 0.81
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 7/136 (5%)
Query: 28 RPARAVRRGGHPAHFCWSRPPVSRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGR 87
R + + RR P +S P + R ++P P P +SPSPPP RR S + + R
Sbjct: 588 RRSPSPRRYSPPIQRRYSPSPPPKRRT--ASPPPPPKRRASPSPPPK-RRVSHSPPPKQR 644
Query: 88 QVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGARSDRPCGAGGDGGG 147
P R L+S + +G P RS +P P R P +
Sbjct: 645 SSPVTKRRSPSLSS----KHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPV 700
Query: 148 RLPGDDDDNDEEQPPP 163
R + P P
Sbjct: 701 RRGASSSPQRRQSPSP 716
Score = 32.3 bits (72), Expect = 1.1
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 47 PPVSRERDDPSAPRPVPALPSSPSPPPPVRRPS 79
PP +R R PS P P P +P+PPP R PS
Sbjct: 552 PPPTRRRRSPS-PAPPPRRRRTPTPPPRRRTPS 583
Score = 29.6 bits (65), Expect = 6.8
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Query: 45 SRPPVSRERDDPSAPRP-------VPALPSSPSPPPPVRRPSAAR 82
S PP R R AP P P +PSPPP R PS R
Sbjct: 551 SPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRR 595
Score = 29.6 bits (65), Expect = 6.8
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 323 PGLPQASTVHPKSPPR--VPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDL 380
P P P PPR PSP P+ + + P R + SP P+ +P PP
Sbjct: 563 PAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPK 622
Query: 381 RLA 383
R A
Sbjct: 623 RRA 625
Score = 29.3 bits (64), Expect = 8.9
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 45 SRPPVSRERDDPSAPRPVPA-LPSSPSPPPPVRRPSAAREQQGR 87
S PP R PSA P PS P+ PPP R S +Q R
Sbjct: 379 SSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR 422
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 42.0 bits (97), Expect = 0.001
Identities = 51/181 (28%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 306 QELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS 365
QE + SL G L S P P P P P+P + +R A +
Sbjct: 200 QEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPT 259
Query: 366 PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAP----WFPQIWY 421
P P +P P PP+ R GQ Q +++G +R+ A A P F + W+
Sbjct: 260 PAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGH---MRKHKASFDHACPVCGRCFKEPWF 316
Query: 422 LL------LEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAV 475
L K G + P A AR P L Y LGP LL A A A
Sbjct: 317 LKNHMKVHASKLGPLRAPGPAS--GPARAPQPPDLGLLAYE---PLGPALLLAPAPTPAE 371
Query: 476 R 476
R
Sbjct: 372 R 372
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 41.2 bits (95), Expect = 0.002
Identities = 47/155 (30%), Positives = 56/155 (36%), Gaps = 35/155 (22%)
Query: 12 RTGRLSQSAREGGG----WARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPRPVPALPS 67
R LS+ R G + R A R G P SR R + S P PA
Sbjct: 30 RVAELSERKRRGSSLCSYYGRSAAGPRAGAQQP----LPQPQSRPRQEQSPP---PARQD 82
Query: 68 SPSPPPPVRRP--SAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAA 125
PP P P ++ R +Q P PLQ+ RGR P + G APAA
Sbjct: 83 LQGPPLPEAAPGITSFRSSPWQQPP------------PLQQRRRGREPEGATGLPGAPAA 130
Query: 126 LG------NGRPGARSDRPCGA----GGDGGGRLP 150
G G G R D G+ GDGG P
Sbjct: 131 EGEPEEEDGGAAGQRRDGRPGSSHNGSGDGGAAAP 165
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.003
Identities = 42/134 (31%), Positives = 49/134 (36%), Gaps = 22/134 (16%)
Query: 50 SRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPL--QRP 107
S R P+AP P P S+ + P P +AAR GR GS R RP
Sbjct: 115 SGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARP 174
Query: 108 FRGRG---PHRSLGCDAAPAALG----------NGRPGARSD-RPCGAGGDGGG------ 147
R G P C AAP RPG+ + R CG G GGG
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAA 234
Query: 148 RLPGDDDDNDEEQP 161
P D +D QP
Sbjct: 235 SSPSADFSSDSPQP 248
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 40.8 bits (94), Expect = 0.003
Identities = 36/100 (36%), Positives = 41/100 (41%), Gaps = 26/100 (26%)
Query: 23 GGGWARPARAVRRGGHPAHFCWSRPP--VSRERD---------DPSAPRPVPALPSSPSP 71
GG W P RG A +SRPP V R R P AP P PALP+ P
Sbjct: 12 GGQWGTPLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARP 71
Query: 72 PPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
P RE + R VPA R A P +RP G+
Sbjct: 72 P---------RENRKRAVPA------RAARGPPKRPAGGQ 96
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 40.8 bits (94), Expect = 0.003
Identities = 36/100 (36%), Positives = 41/100 (41%), Gaps = 26/100 (26%)
Query: 23 GGGWARPARAVRRGGHPAHFCWSRPP--VSRERD---------DPSAPRPVPALPSSPSP 71
GG W P RG A +SRPP V R R P AP P PALP+ P
Sbjct: 12 GGQWGTPLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARP 71
Query: 72 PPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
P RE + R VPA R A P +RP G+
Sbjct: 72 P---------RENRKRAVPA------RAARGPPKRPAGGQ 96
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.003
Identities = 42/134 (31%), Positives = 49/134 (36%), Gaps = 22/134 (16%)
Query: 50 SRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPL--QRP 107
S R P+AP P P S+ + P P +AAR GR GS R RP
Sbjct: 115 SGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARP 174
Query: 108 FRGRG---PHRSLGCDAAPAALG----------NGRPGARSD-RPCGAGGDGGG------ 147
R G P C AAP RPG+ + R CG G GGG
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAA 234
Query: 148 RLPGDDDDNDEEQP 161
P D +D QP
Sbjct: 235 SSPSADFSSDSPQP 248
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 40.8 bits (94), Expect = 0.003
Identities = 36/100 (36%), Positives = 41/100 (41%), Gaps = 26/100 (26%)
Query: 23 GGGWARPARAVRRGGHPAHFCWSRPP--VSRERD---------DPSAPRPVPALPSSPSP 71
GG W P RG A +SRPP V R R P AP P PALP+ P
Sbjct: 12 GGQWGTPLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARP 71
Query: 72 PPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
P RE + R VPA R A P +RP G+
Sbjct: 72 P---------RENRKRAVPA------RAARGPPKRPAGGQ 96
Score = 29.6 bits (65), Expect = 6.8
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 19/89 (21%)
Query: 27 ARPARAVRRGGHPAHFCWSRPP-------------VSRERDDPSAPRPVPALPSSPSPPP 73
ARP R R+ PA P ER P PR P P P P P
Sbjct: 69 ARPPRENRKRAVPARAARGPPKRPAGGQTGGVEAASGEERSQPRRPRRPPPAPRRPRPAP 128
Query: 74 PVRR------PSAAREQQGRQVPAGSLRD 96
R+ P RE+ GR G D
Sbjct: 129 GRRKSLYEAAPLLTREKGGRSGRRGDRGD 157
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.003
Identities = 42/134 (31%), Positives = 49/134 (36%), Gaps = 22/134 (16%)
Query: 50 SRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPL--QRP 107
S R P+AP P P S+ + P P +AAR GR GS R RP
Sbjct: 115 SGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARP 174
Query: 108 FRGRG---PHRSLGCDAAPAALG----------NGRPGARSD-RPCGAGGDGGG------ 147
R G P C AAP RPG+ + R CG G GGG
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAA 234
Query: 148 RLPGDDDDNDEEQP 161
P D +D QP
Sbjct: 235 SSPSADFSSDSPQP 248
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/126 (26%), Positives = 39/126 (30%), Gaps = 28/126 (22%)
Query: 56 PSAPRPVPALPSSPS-PPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPH 114
PS+P P L S + PPPP P Q Q P Q PF GP
Sbjct: 444 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA------------QHPFVPGGPP 491
Query: 115 RSLGCDAAPAALGNGRPGARSDRPCGAGGDGGGRLPGD---------------DDDNDEE 159
+ PG + PC GG + G DD + E
Sbjct: 492 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 551
Query: 160 QPPPLP 165
PPP P
Sbjct: 552 SPPPPP 557
Score = 29.6 bits (65), Expect = 6.8
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 57 SAPRPVPALPS-SPSPP----PPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
SAP P LP+ P+P PP P+A++ Q P + + P P R
Sbjct: 199 SAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 258
Query: 112 GPH 114
PH
Sbjct: 259 SPH 261
Score = 29.3 bits (64), Expect = 8.9
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 14/71 (19%)
Query: 325 LPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS-----PHPQSPLRAPKPP- 378
+ QA +HP+ PP SPHP P S H Q T + H Q PL PP
Sbjct: 246 IQQAPALHPQRPP---SPHPPP---HPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPG 299
Query: 379 --DLRLAPLGQ 387
L+ PL Q
Sbjct: 300 PHSLQAGPLLQ 310
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/126 (26%), Positives = 39/126 (30%), Gaps = 28/126 (22%)
Query: 56 PSAPRPVPALPSSPS-PPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPH 114
PS+P P L S + PPPP P Q Q P Q PF GP
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA------------QHPFVPGGPP 1045
Query: 115 RSLGCDAAPAALGNGRPGARSDRPCGAGGDGGGRLPGD---------------DDDNDEE 159
+ PG + PC GG + G DD + E
Sbjct: 1046 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 1105
Query: 160 QPPPLP 165
PPP P
Sbjct: 1106 SPPPPP 1111
Score = 29.6 bits (65), Expect = 6.8
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 57 SAPRPVPALPS-SPSPP----PPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
SAP P LP+ P+P PP P+A++ Q P + + P P R
Sbjct: 753 SAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812
Query: 112 GPH 114
PH
Sbjct: 813 SPH 815
Score = 29.3 bits (64), Expect = 8.9
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 14/71 (19%)
Query: 325 LPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS-----PHPQSPLRAPKPP- 378
+ QA +HP+ PP SPHP P S H Q T + H Q PL PP
Sbjct: 800 IQQAPALHPQRPP---SPHPPP---HPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPG 853
Query: 379 --DLRLAPLGQ 387
L+ PL Q
Sbjct: 854 PHSLQAGPLLQ 864
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/126 (26%), Positives = 39/126 (30%), Gaps = 28/126 (22%)
Query: 56 PSAPRPVPALPSSPS-PPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPH 114
PS+P P L S + PPPP P Q Q P Q PF GP
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA------------QHPFVPGGPP 1045
Query: 115 RSLGCDAAPAALGNGRPGARSDRPCGAGGDGGGRLPGD---------------DDDNDEE 159
+ PG + PC GG + G DD + E
Sbjct: 1046 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 1105
Query: 160 QPPPLP 165
PPP P
Sbjct: 1106 SPPPPP 1111
Score = 29.6 bits (65), Expect = 6.8
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 57 SAPRPVPALPS-SPSPP----PPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGR 111
SAP P LP+ P+P PP P+A++ Q P + + P P R
Sbjct: 753 SAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812
Query: 112 GPH 114
PH
Sbjct: 813 SPH 815
Score = 29.3 bits (64), Expect = 8.9
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 14/71 (19%)
Query: 325 LPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS-----PHPQSPLRAPKPP- 378
+ QA +HP+ PP SPHP P S H Q T + H Q PL PP
Sbjct: 800 IQQAPALHPQRPP---SPHPPP---HPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPG 853
Query: 379 --DLRLAPLGQ 387
L+ PL Q
Sbjct: 854 PHSLQAGPLLQ 864
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 40.4 bits (93), Expect = 0.004
Identities = 52/155 (33%), Positives = 55/155 (35%), Gaps = 17/155 (10%)
Query: 4 GTRHNHGRRT-GRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPRPV 62
G R HG RT G AR G G RPA R P S R R RP
Sbjct: 30 GPRERHGPRTPGGQLPGARRGPGPRRPAPLPAR---PPGALGSVLRPLRARPGCRPRRPH 86
Query: 63 PALPSSP-SPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDA 121
PA P P P RR R G + GS + P RP GR +L A
Sbjct: 87 PAARCLPLRPHRPTRRH---RRPGGFPLAWGSPQ-------PAPRPAPGRSSALALAGGA 136
Query: 122 APAALGNGRPGARSDR--PCGAGGDGGGRLPGDDD 154
AP RPG R P G G GG G D
Sbjct: 137 APGVARAQRPGGSGGRSHPGGPGSPRGGGTVGPGD 171
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 40.4 bits (93), Expect = 0.004
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 37 GHPAHFCWSRPPVSRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRD 96
GHP+ + PVS P P PVP P+ +PPPP P+ + + S
Sbjct: 169 GHPSSA--ASAPVSCSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDESSMSGLA 226
Query: 97 CRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGARSDRPCGAGGDGG 146
+A L+R R DA+ + +G + ++R GG GG
Sbjct: 227 AAIAGAKLRRVQRPE--------DASGGSSPSGTSKSDANRASSGGGGGG 268
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 40.0 bits (92), Expect = 0.005
Identities = 57/217 (26%), Positives = 70/217 (32%), Gaps = 67/217 (30%)
Query: 3 LGTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPRPV 62
LG R N G R AR G WAR +RRG H C R P R +A +
Sbjct: 361 LGARANEGGGAPRPPAGARVFGVWAR--GRLRRG---CHKCADRAP----RAPKAAAKAA 411
Query: 63 PALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRP--FRGR-------GP 113
PA ++ AA E G PA LR + L + P F R GP
Sbjct: 412 PAKRTARRRXXXXDTVPAAPEGAGAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGP 471
Query: 114 HRSLGC------DAAPAALGNGRP-----------------GARSDRPCGAG-------- 142
C APA +GRP GA P AG
Sbjct: 472 VAPAACAPCASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEA 531
Query: 143 ------------------GDGGGRLPGDDDDNDEEQP 161
D G +P D+DD+++E P
Sbjct: 532 ETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDEDEAP 568
Score = 32.0 bits (71), Expect = 1.4
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 31 RAVRRGGHPAHFCWSRPPVSRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVP 90
R+VRR HP P + R P R + ALP+ + R ++ R P
Sbjct: 210 RSVRRRAHP-------PVHAPARSHPEEARAL-ALPAPTRVHLRLAARCVGRRRRERSDP 261
Query: 91 AGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGARS 135
GS D L GRGP + C A AA+ + G R+
Sbjct: 262 PGSYHDPALGLRTPGPILEGRGPRAAGPCPANTAAVDKTQGGWRA 306
>gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 40.0 bits (92), Expect = 0.005
Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 16/123 (13%)
Query: 25 GWARPARAVRRGGHPAHFCWSRPP---VSRERDDPSAPRPVPALPSSPSP-PPPVRRPSA 80
G ARP + G H SRPP ++ D PRPVP LP + P P +RRPS
Sbjct: 24 GKARPPSS--SGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAALPLSPELRRPST 81
Query: 81 AREQ-------QGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGA 133
+Q + R PA L A PL P GR +RS + P N RP A
Sbjct: 82 VPDQPPATDNRRSRMAPA--LSTVCGAHRPLAPP-PGRAANRSRQRQSTPHRPANWRPYA 138
Query: 134 RSD 136
D
Sbjct: 139 LDD 141
>gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 40.0 bits (92), Expect = 0.005
Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 16/123 (13%)
Query: 25 GWARPARAVRRGGHPAHFCWSRPP---VSRERDDPSAPRPVPALPSSPSP-PPPVRRPSA 80
G ARP + G H SRPP ++ D PRPVP LP + P P +RRPS
Sbjct: 24 GKARPPSS--SGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAALPLSPELRRPST 81
Query: 81 AREQ-------QGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAALGNGRPGA 133
+Q + R PA L A PL P GR +RS + P N RP A
Sbjct: 82 VPDQPPATDNRRSRMAPA--LSTVCGAHRPLAPP-PGRAANRSRQRQSTPHRPANWRPYA 138
Query: 134 RSD 136
D
Sbjct: 139 LDD 141
>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
Length = 890
Score = 40.0 bits (92), Expect = 0.005
Identities = 77/323 (23%), Positives = 108/323 (33%), Gaps = 66/323 (20%)
Query: 67 SSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQRPFRGRGPHRSLGCDAAPAAL 126
SSPS RE++ R+ AG R AS + P R + G +
Sbjct: 9 SSPSGRGSSSSAKRPRERE-REAEAGGRRAAHKASGGAKHPVPARARDKPRGSGSGGGGH 67
Query: 127 GNGRPG------ARSDRPCGAGGDGGGRL------PGDDDDNDEEQPPPLPLTGRCWRDG 174
+GR A S R G+G GGGR PG + P P P
Sbjct: 68 RDGRGTGDANHRASSGRSSGSGAGGGGRGGKASGDPGASGMSPRASPLPPP--------- 118
Query: 175 VYRWFSELPSPQRVEFLCGLLDLCMPLEVRFFGSSLEDLARKDYHSLRDSEIKANNPADL 234
P P E C GSS A +Y +L S + PA+
Sbjct: 119 --------PPPPGAEPACP-------------GSSA---AAPEYKTLLISSLSPALPAE- 153
Query: 235 GSLTNLTDEVVRS-KLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMSSNH 293
+L D + K ++L S E V Y H + R
Sbjct: 154 ----HLEDRLFHQFKRFGEISLRLSHTPELGRVAYVNFRHPQDAREA------------- 196
Query: 294 RAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSL 353
R + ++ +L +++ GGG +S+ +PP P P P L L L
Sbjct: 197 RQHALARQLLLYDRPLKVEPVYLRGGGGSSRRSSSSSAAASTPPPGP-PAPADPLGYLPL 255
Query: 354 HFKPQDRTAALSPHPQSPLRAPK 376
H Q + +LSP PLR P+
Sbjct: 256 HGGYQYKQRSLSPVAAPPLREPR 278
Score = 29.3 bits (64), Expect = 8.9
Identities = 27/99 (27%), Positives = 32/99 (32%), Gaps = 16/99 (16%)
Query: 4 GTRHNHGRRTGRLSQSAREGGGWARPARAVRRGGHPAHFCWSRPPVSRERDDPSAPRPVP 63
G H GR TG + A G A RGG + DP A P
Sbjct: 64 GGGHRDGRGTGDANHRASSGRSSGSGAGGGGRGG-------------KASGDPGASGMSP 110
Query: 64 ALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASL 102
P PPPP P A G A + ++SL
Sbjct: 111 RASPLPPPPPP---PGAEPACPGSSAAAPEYKTLLISSL 146
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 40.0 bits (92), Expect = 0.005
Identities = 41/126 (32%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 47 PPVSRERDDPSAPRPVPALPSSPSPPPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQR 106
PPV E+ P P LP SPSP PV P+A P S L
Sbjct: 187 PPVVEEQPQPPLAMPPYPLPYSPSPSLPV-GPTAHGALPPAPFPVVSQPSFYSGPLGPTY 245
Query: 107 PFRGRGPHRSLGCDAAPAALGNGRPGARSDRPCGAGGDG----GGRLPGDDDDNDEEQPP 162
P GP + G +P RPG P GA G G GGR P Q
Sbjct: 246 PAAQLGPRGAAGYSWSPQRSMPPRPG-YPGTPMGASGPGYPLRGGRAPSP----GYPQQS 300
Query: 163 PLPLTG 168
P P TG
Sbjct: 301 PYPATG 306
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,136,263
Number of Sequences: 37866
Number of extensions: 1696307
Number of successful extensions: 19235
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 709
Number of HSP's that attempted gapping in prelim test: 14064
Number of HSP's gapped (non-prelim): 5011
length of query: 511
length of database: 18,247,518
effective HSP length: 107
effective length of query: 404
effective length of database: 14,195,856
effective search space: 5735125824
effective search space used: 5735125824
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.