Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169205717
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169205717 PREDICTED: hypothetical protein [Homo sapiens]
(189 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169206326 PREDICTED: hypothetical protein [Homo sapiens] 388 e-108
gi|169206576 PREDICTED: hypothetical protein [Homo sapiens] 388 e-108
gi|169205717 PREDICTED: hypothetical protein [Homo sapiens] 388 e-108
gi|7657138 golgi integral membrane protein 4 [Homo sapiens] 34 0.066
gi|87578396 microtubule-associated protein 2 isoform 1 [Homo sap... 33 0.19
gi|24797151 dimethylglycine dehydrogenase precursor [Homo sapiens] 32 0.33
gi|7656977 calcitonin gene-related peptide-receptor component pr... 30 0.95
gi|31542634 filamin A interacting protein 1 [Homo sapiens] 30 1.2
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 30 1.6
gi|227495694 calcitonin gene-related peptide-receptor component ... 30 1.6
gi|221316624 dystonin isoform 4 [Homo sapiens] 30 1.6
gi|221316622 dystonin isoform 3 [Homo sapiens] 30 1.6
gi|221316618 dystonin isoform 2 [Homo sapiens] 30 1.6
gi|34577047 dystonin isoform 1 [Homo sapiens] 30 1.6
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 30 1.6
gi|100913026 calcitonin gene-related peptide-receptor component ... 30 1.6
gi|38016937 lemur tyrosine kinase 2 [Homo sapiens] 29 2.1
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 29 2.1
gi|194440727 dynein heavy chain domain 2 isoform 1 [Homo sapiens] 28 3.6
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 28 3.6
gi|55741677 SET domain containing 1A [Homo sapiens] 28 4.7
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 28 6.1
gi|157388975 coiled-coil domain containing 99 [Homo sapiens] 28 6.1
gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2) int... 27 8.0
gi|58530840 desmoplakin isoform I [Homo sapiens] 27 8.0
gi|165905601 proline-serine-threonine phosphatase interacting pr... 27 8.0
gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo ... 27 8.0
gi|55741643 kelch-like 14 [Homo sapiens] 27 8.0
>gi|169206326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 388 bits (996), Expect = e-108
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MQQQHCRRTFRFTCGRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLR 60
MQQQHCRRTFRFTCGRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLR
Sbjct: 1 MQQQHCRRTFRFTCGRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLR 60
Query: 61 EASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRH 120
EASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRH
Sbjct: 61 EASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRH 120
Query: 121 VTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGL 180
VTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGL
Sbjct: 121 VTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGL 180
Query: 181 EQTVILLAH 189
EQTVILLAH
Sbjct: 181 EQTVILLAH 189
>gi|169206576 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 388 bits (996), Expect = e-108
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MQQQHCRRTFRFTCGRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLR 60
MQQQHCRRTFRFTCGRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLR
Sbjct: 1 MQQQHCRRTFRFTCGRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLR 60
Query: 61 EASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRH 120
EASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRH
Sbjct: 61 EASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRH 120
Query: 121 VTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGL 180
VTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGL
Sbjct: 121 VTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGL 180
Query: 181 EQTVILLAH 189
EQTVILLAH
Sbjct: 181 EQTVILLAH 189
>gi|169205717 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 388 bits (996), Expect = e-108
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MQQQHCRRTFRFTCGRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLR 60
MQQQHCRRTFRFTCGRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLR
Sbjct: 1 MQQQHCRRTFRFTCGRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLR 60
Query: 61 EASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRH 120
EASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRH
Sbjct: 61 EASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRH 120
Query: 121 VTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGL 180
VTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGL
Sbjct: 121 VTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGL 180
Query: 181 EQTVILLAH 189
EQTVILLAH
Sbjct: 181 EQTVILLAH 189
>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
Length = 696
Score = 34.3 bits (77), Expect = 0.066
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 122 TAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYR-----LKAEPWRE 176
+A+ +QH++ + Q E KQH D EE++ K GED + ++ L+ E +E
Sbjct: 112 SALNVQHQM----LKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQE 167
Query: 177 TSGLEQTV 184
S L++TV
Sbjct: 168 LSKLKETV 175
>gi|87578396 microtubule-associated protein 2 isoform 1 [Homo sapiens]
Length = 1827
Score = 32.7 bits (73), Expect = 0.19
Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 25 GLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLREASCSMERPTGQELMYLAKGQ--- 81
G+ +Q A+D +P S K G P + E S +E Q L + +GQ
Sbjct: 993 GVTYEQALAKDLSIPTDASSEKAEKGLSSVPEIAEVEPSKKVE----QGLDFAVQGQLDV 1048
Query: 82 -----------------QRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAV 124
+ E + ++ +T S+ A F + + V+
Sbjct: 1049 KISDFGQMASGLNIDDRRATELKLEATQDMTPSSKAPQEADAFMGVESGHMKEGTKVSET 1108
Query: 125 EIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGLEQTV 184
E++ K+ + HQE+ DKEE YE GE + + LKA+ ++ + E ++
Sbjct: 1109 EVKEKVAKPDLVHQEA------VDKEESYESSGEH--ESLTMESLKADEGKKETSPESSL 1160
Query: 185 I 185
I
Sbjct: 1161 I 1161
>gi|24797151 dimethylglycine dehydrogenase precursor [Homo sapiens]
Length = 866
Score = 32.0 bits (71), Expect = 0.33
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 115 IMQFRHVTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEI 164
+++ +TA H LT +H K HYD + YEK E+ GQ +
Sbjct: 78 LLEKSELTAGSTWHAAGLTTYFHPGINLKKIHYDSIKLYEKLEEETGQVV 127
>gi|7656977 calcitonin gene-related peptide-receptor component
protein isoform a [Homo sapiens]
Length = 148
Score = 30.4 bits (67), Expect = 0.95
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 70 TGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVEIQHK 129
T + L Y++K C+ S ++ R L + T+A +++ R VTAVEIQ
Sbjct: 46 TYETLKYISK-----TPCRHQSPEIVREFLTALKSHKLTKAEKLQLLNHRPVTAVEIQLM 100
Query: 130 LE 131
+E
Sbjct: 101 VE 102
>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
Length = 1213
Score = 30.0 bits (66), Expect = 1.2
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 60 REASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLE-MTTAPVFTRANVFEIMQF 118
R+A + E+ G+++ K L+ ++ ++ R LE + A R V+E+
Sbjct: 129 RDAILAQEKSIGEDVY--EKPISELDRLEEKQKETYRRMLEQLLLAEKCHRRTVYELENE 186
Query: 119 RHVTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEIL 165
+H + + T + QE E+LK+ ++E+ Y+ E + + L
Sbjct: 187 KHKHTDYMNKSDDFTNLLEQERERLKKLLEQEKAYQARKEKENAKRL 233
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 29.6 bits (65), Expect = 1.6
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 68 RPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVEIQ 127
R +EL +GQ R + S + E A R E MQ R A++++
Sbjct: 386 RSQHRELQQALEGQLREAEQARASMQAEMELKEEEAARQRQRIKELEEMQQRLQEALQLE 445
Query: 128 HK---------LELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRETS 178
K + T + +E EKLKQ +E+ E+Y E QE L+ E +++
Sbjct: 446 VKARRDEESVRIAQTRLLEEEEEKLKQLMQLKEEQERYIERAQQE--KEELQQEMAQQSR 503
Query: 179 GLEQ 182
L+Q
Sbjct: 504 SLQQ 507
>gi|227495694 calcitonin gene-related peptide-receptor component
protein isoform d [Homo sapiens]
Length = 141
Score = 29.6 bits (65), Expect = 1.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 72 QELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVEIQHKLE 131
+ L Y++K C+ S ++ R L + T+A +++ R VTAVEIQ +E
Sbjct: 41 ETLKYISK-----TPCRHQSPEIVREFLTALKSHKLTKAEKLQLLNHRPVTAVEIQLMVE 95
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 29.6 bits (65), Expect = 1.6
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 66 MERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVE 125
+++ TG E++ + Q +LEA + + +T+ ++T T ++ + H T E
Sbjct: 3621 LKQTTGDEVLII---QDKLEAIKARYKDITK----LSTDVAKTLEQALQLARRLHSTHEE 3673
Query: 126 I---QHKLELTVVYHQ----------ESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAE 172
+ K+E+ ++ ++ +++ + KE K K D E+ L+
Sbjct: 3674 LCTWLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3733
Query: 173 PWRETSGLEQTV 184
PWR GLE+ V
Sbjct: 3734 PWRAREGLEKMV 3745
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 29.6 bits (65), Expect = 1.6
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 66 MERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVE 125
+++ TG E++ + Q +LEA + + +T+ ++T T ++ + H T E
Sbjct: 3632 LKQTTGDEVLII---QDKLEAIKARYKDITK----LSTDVAKTLEQALQLARRLHSTHEE 3684
Query: 126 I---QHKLELTVVYHQ----------ESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAE 172
+ K+E+ ++ ++ +++ + KE K K D E+ L+
Sbjct: 3685 LCTWLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3744
Query: 173 PWRETSGLEQTV 184
PWR GLE+ V
Sbjct: 3745 PWRAREGLEKMV 3756
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 29.6 bits (65), Expect = 1.6
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 66 MERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVE 125
+++ TG E++ + Q +LEA + + +T+ ++T T ++ + H T E
Sbjct: 3770 LKQTTGDEVLII---QDKLEAIKARYKDITK----LSTDVAKTLEQALQLARRLHSTHEE 3822
Query: 126 I---QHKLELTVVYHQ----------ESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAE 172
+ K+E+ ++ ++ +++ + KE K K D E+ L+
Sbjct: 3823 LCTWLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3882
Query: 173 PWRETSGLEQTV 184
PWR GLE+ V
Sbjct: 3883 PWRAREGLEKMV 3894
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 29.6 bits (65), Expect = 1.6
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 66 MERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVE 125
+++ TG E++ + Q +LEA + + +T+ ++T T ++ + H T E
Sbjct: 3592 LKQTTGDEVLII---QDKLEAIKARYKDITK----LSTDVAKTLEQALQLARRLHSTHEE 3644
Query: 126 I---QHKLELTVVYHQ----------ESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAE 172
+ K+E+ ++ ++ +++ + KE K K D E+ L+
Sbjct: 3645 LCTWLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3704
Query: 173 PWRETSGLEQTV 184
PWR GLE+ V
Sbjct: 3705 PWRAREGLEKMV 3716
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 29.6 bits (65), Expect = 1.6
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 66 MERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVE 125
+++ TG E++ + Q +LEA + + +T+ ++T T ++ + H T E
Sbjct: 3266 LKQTTGDEVLII---QDKLEAIKARYKDITK----LSTDVAKTLEQALQLARRLHSTHEE 3318
Query: 126 I---QHKLELTVVYHQ----------ESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAE 172
+ K+E+ ++ ++ +++ + KE K K D E+ L+
Sbjct: 3319 LCTWLDKVEVELLSYETQVLKGEEASQAQMRPKELKKEAKNNKALLDSLNEVSSALLELV 3378
Query: 173 PWRETSGLEQTV 184
PWR GLE+ V
Sbjct: 3379 PWRAREGLEKMV 3390
>gi|100913026 calcitonin gene-related peptide-receptor component
protein isoform b [Homo sapiens]
Length = 115
Score = 29.6 bits (65), Expect = 1.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 72 QELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVEIQHKLE 131
+ L Y++K C+ S ++ R L + T+A +++ R VTAVEIQ +E
Sbjct: 15 ETLKYISK-----TPCRHQSPEIVREFLTALKSHKLTKAEKLQLLNHRPVTAVEIQLMVE 69
>gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]
Length = 1503
Score = 29.3 bits (64), Expect = 2.1
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 27 AEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLREASCSMERPTGQELMYLAKGQQRLEA 86
+E ++ +E+ VP T PSA L + P VL E S P Q+ A+ Q E+
Sbjct: 1111 SEPEKRSEE--VPGTSPSALVLVQEQPLPEPVLPEQS-----PAAQDSCLEARKSQPDES 1163
Query: 87 CQQLSEKVTRSNLEMTTAP 105
C LS S+LE+ P
Sbjct: 1164 C--LSALHNSSDLELRATP 1180
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 29.3 bits (64), Expect = 2.1
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 77 LAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVEIQHKLELTVVY 136
L + RL+ +QLS + + + + E ++ + + E+QH+L+ T
Sbjct: 430 LGEAHGRLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQ 489
Query: 137 HQESEKLKQ 145
HQE + L+Q
Sbjct: 490 HQEQQALQQ 498
>gi|194440727 dynein heavy chain domain 2 isoform 1 [Homo sapiens]
Length = 3092
Score = 28.5 bits (62), Expect = 3.6
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 73 ELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAV-EIQHKLE 131
EL+ AK ++ E + + + E FT E MQ ++VT V ++Q ++
Sbjct: 592 ELIENAKHKKENELMAKREKLILEIEKESRRMEEFTEFAELERMQ-QYVTDVRQLQKRI- 649
Query: 132 LTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAEPWRE 176
QESE+ Q +KEE+ K+ K E+ ++ EP+++
Sbjct: 650 ------QESEEAVQFINKEEELFKWELTKYPELDKLKVNIEPYQK 688
>gi|47825361 non-specific cytotoxic cell receptor protein 1
homolog [Homo sapiens]
Length = 275
Score = 28.5 bits (62), Expect = 3.6
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 17 HAQGGGVA--GLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPALVLREA 62
HA GGG+ G A QE PR P+ PS LP P+ EA
Sbjct: 8 HALGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEA 55
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 28.1 bits (61), Expect = 4.7
Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 19/156 (12%)
Query: 15 GRHAQGGGVAGLAEDQEAAEDPRVPNTDPSAKFL------PGRRDWPALVLREASCSMER 68
G ++ GG L E++EA P T+ L P RR PAL E S + E
Sbjct: 1228 GGRSRAGGRGRLTEEEEAE-----PGTEVDLAVLADLALTPARRGLPALPAVEDSEATET 1282
Query: 69 PTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTA-PVFTRANVFEIMQFRHVTAVEIQ 127
E LE L+ K T + PV A +F + A E+
Sbjct: 1283 SDEAERPRPLLSHILLEHNYALAVKPTPPAPALRPPEPVPAPAALFSSPADEVLEAPEV- 1341
Query: 128 HKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQE 163
VV E K +Q + E+ E+ GE++G+E
Sbjct: 1342 ------VVAEAEEPKPQQLQQQREEGEEEGEEEGEE 1371
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 27.7 bits (60), Expect = 6.1
Identities = 36/158 (22%), Positives = 60/158 (37%), Gaps = 26/158 (16%)
Query: 35 DPRVPNTDPSAKFLPGRRDWPALVLREASCSM-ERPTGQELMYLAKGQQRLEAC------ 87
+P P+TDPS + PG PA C++ +PT Q ++ +G L C
Sbjct: 1461 EPGFPDTDPSQVYSPGLPPAPAQPSSIPPCALVSQPTVQ---FILQGSLPLVGCGAAQTL 1517
Query: 88 -----------QQLSEKVTRSNL-EMTTAP--VFTRANVFEIMQFRHVTAVEIQHKLELT 133
+ S+ SN E T AP + E M+ H+ ++
Sbjct: 1518 APVPAALTPASEPASQATAASNSEEKTPAPRLAAEKTKKEEYMKKLHMQERAVEEVKLAI 1577
Query: 134 VVYHQESEKLKQHYDK--EEKYEKYGEDKGQEILPYRL 169
++Q+ E K+ Y + +K K EI P ++
Sbjct: 1578 KPFYQKREVTKEEYKDILRKAVQKICHSKSGEINPVKV 1615
>gi|157388975 coiled-coil domain containing 99 [Homo sapiens]
Length = 605
Score = 27.7 bits (60), Expect = 6.1
Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Query: 58 VLREASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQ 117
++ C ++ + L G Q +E+ +L ++ + EM T +E +
Sbjct: 5 IITNLRCRLKEAEEERLKAAQYGLQLVESQNELQNQLDKCRNEM-----MTMTESYEQEK 59
Query: 118 FRHVTAVEIQHKLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAE 172
+ VE++ ++ ++ E+ K +Q E+ E+ GQE+ + K E
Sbjct: 60 YTLQREVELKSRMLESLSCECEAIKQQQKMHLEKLEEQLSRSHGQEVNELKTKIE 114
>gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2)
interacting protein [Homo sapiens]
Length = 1211
Score = 27.3 bits (59), Expect = 8.0
Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 18/93 (19%)
Query: 19 QGGGVAGLAEDQEAAEDPRVPNTDPSAKFLPGRRDWPA---------LVLREASCSMERP 69
+G V GL+ ++ R P PS LP P VLR C
Sbjct: 53 EGLAVGGLSRERLVRLARRCPRVPPSLGVLPAPDGGPGPGSGPAAPTTVLRAPRCGRGLA 112
Query: 70 TGQELMYLAKGQQRLEA--------CQQLSEKV 94
G+EL+ LA G++R +A Q+ S KV
Sbjct: 113 LGRELLRLA-GRKRPDAVHRERRRKAQEFSRKV 144
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 27.3 bits (59), Expect = 8.0
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 127 QH-KLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQEILPYRLKAE 172
QH ++EL V Q SE +H E+ K +DK +EI RLKAE
Sbjct: 1289 QHLEIELKQVMQQRSEDNARHKQSLEEAAKTIQDKNKEI--ERLKAE 1333
>gi|165905601 proline-serine-threonine phosphatase interacting
protein 2 [Homo sapiens]
Length = 334
Score = 27.3 bits (59), Expect = 8.0
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 65 SMERPTGQELMYLAKGQQRLEACQQLSEKVTRSNLEMTTAPVFTRANVFEIMQFRHVTAV 124
S ++P GQ + K + LE +Q + V + ++++ + R ++ +FR +
Sbjct: 60 SRKKPCGQSEINTLK--RALEVFKQQVDNVAQCHIQLAQS---LREEARKMEEFREKQKL 114
Query: 125 EIQH-KLELTVVYHQESEKLKQHYDKEEKYEKYGEDKGQ 162
+ + +L + ++ Q+S + K+ D ++ YE+ DK +
Sbjct: 115 QRKKTELIMDAIHKQKSLQFKKTMDAKKNYEQKCRDKDE 153
>gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo
sapiens]
Length = 539
Score = 27.3 bits (59), Expect = 8.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 36 PRVPNTDPSAKFLPGRRDWPALVLREASCSMERPTGQELMYLAKGQQR 83
P P+ P++ ++P PA REAS E P+ A+ +QR
Sbjct: 337 PSTPSVVPASSYIPSSETPPAPSSREASRPPEEPSAPSPTLPAQFKQR 384
>gi|55741643 kelch-like 14 [Homo sapiens]
Length = 628
Score = 27.3 bits (59), Expect = 8.0
Identities = 41/179 (22%), Positives = 67/179 (37%), Gaps = 37/179 (20%)
Query: 2 QQQHCRRTFRFTCGRHAQ---------GGGVAG-----LAEDQEAA-------------- 33
QQ HC + +C ++ + GGGV G +DQ+
Sbjct: 42 QQFHCHKAVLASCSQYFRSLFSSHPPLGGGVGGQDGLGAPKDQQQPPQQQPSQQQQPPPQ 101
Query: 34 EDPRVPNTDPSAKFLPGRRDWPALVLREASCSMERPTGQELMYLAKGQQRLEACQQ-LSE 92
E+P P++ P K L R LVL+ S S+ E +Y A L+ ++ LS
Sbjct: 102 EEPGTPSSSPDDKLLTSPRAINNLVLQGCS-SIGLRLVLEYLYTANVTLSLDTVEEVLSV 160
Query: 93 KVTRSNLEMTTAPVFTRANVFEIMQFRHVTAVEIQHKLELTVVYHQESEKLKQHYDKEE 151
++T V + + ++ V + H LE E++KL Y E+
Sbjct: 161 SKILHIPQVTKLCVQFLNDQISVQNYKQVCKIAALHGLE-------ETKKLANKYLVED 212
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,265,687
Number of Sequences: 37866
Number of extensions: 321373
Number of successful extensions: 1317
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1304
Number of HSP's gapped (non-prelim): 34
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.