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Search of human proteins with 169194762
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169194762 PREDICTED: hypothetical protein [Homo sapiens]
(86 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169194762 PREDICTED: hypothetical protein [Homo sapiens] 182 4e-47
gi|59814411 hypothetical protein LOC253725 [Homo sapiens] 91 1e-19
gi|54124343 hypothetical protein LOC387680 [Homo sapiens] 90 4e-19
gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo... 30 0.31
gi|239754026 PREDICTED: hypothetical protein [Homo sapiens] 30 0.31
gi|239748557 PREDICTED: hypothetical protein XP_002346722 [Homo ... 30 0.31
gi|239742540 PREDICTED: hypothetical protein XP_002342571 [Homo ... 30 0.31
gi|239756806 PREDICTED: hypothetical protein [Homo sapiens] 29 0.91
gi|239751296 PREDICTED: hypothetical protein XP_002347798 [Homo ... 29 0.91
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 29 0.91
gi|239745793 PREDICTED: hypothetical protein XP_002343590 [Homo ... 29 0.91
gi|122937327 BTB (POZ) domain containing 17 [Homo sapiens] 29 0.91
gi|195972890 unc-84 homolog A isoform a [Homo sapiens] 28 1.6
gi|110227866 unc-84 homolog A isoform b [Homo sapiens] 28 1.6
gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens] 28 1.6
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 28 1.6
gi|239756051 PREDICTED: hypothetical protein XP_002344785 [Homo ... 28 2.0
gi|239750558 PREDICTED: hypothetical protein [Homo sapiens] 28 2.0
gi|239744855 PREDICTED: hypothetical protein XP_002344122 [Homo ... 28 2.0
gi|47933339 RNA binding motif protein 15 [Homo sapiens] 27 2.7
gi|239744898 PREDICTED: hypothetical protein XP_002343297 [Homo ... 27 3.5
gi|155029552 hypothetical protein LOC388115 [Homo sapiens] 27 3.5
gi|239757267 PREDICTED: hypothetical protein XP_002345242 [Homo ... 27 4.5
gi|239751770 PREDICTED: hypothetical protein XP_002348010 [Homo ... 27 4.5
gi|239746265 PREDICTED: hypothetical protein XP_002343686 [Homo ... 27 4.5
gi|95147335 inositol 1,4,5-triphosphate receptor, type 2 [Homo s... 27 4.5
gi|239755899 PREDICTED: hypothetical protein [Homo sapiens] 26 5.9
gi|239750388 PREDICTED: hypothetical protein XP_002347412 [Homo ... 26 5.9
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 26 5.9
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 26 5.9
>gi|169194762 PREDICTED: hypothetical protein [Homo sapiens]
Length = 86
Score = 182 bits (463), Expect = 4e-47
Identities = 86/86 (100%), Positives = 86/86 (100%)
Query: 1 MMNRTTPDQELVPASEPVWERPWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAWLA 60
MMNRTTPDQELVPASEPVWERPWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAWLA
Sbjct: 1 MMNRTTPDQELVPASEPVWERPWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAWLA 60
Query: 61 RRRAGPRLPLHLARPVACPLRNTRPV 86
RRRAGPRLPLHLARPVACPLRNTRPV
Sbjct: 61 RRRAGPRLPLHLARPVACPLRNTRPV 86
>gi|59814411 hypothetical protein LOC253725 [Homo sapiens]
Length = 1318
Score = 91.3 bits (225), Expect = 1e-19
Identities = 42/43 (97%), Positives = 43/43 (100%)
Query: 1 MMNRTTPDQELVPASEPVWERPWSVEEIRRSSQSWSLAADAGV 43
MMNRTTPDQELVPASEPVWERPWSVEEIRRSSQSWSLAADAG+
Sbjct: 1 MMNRTTPDQELVPASEPVWERPWSVEEIRRSSQSWSLAADAGL 43
>gi|54124343 hypothetical protein LOC387680 [Homo sapiens]
Length = 1341
Score = 89.7 bits (221), Expect = 4e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Query: 1 MMNRTTPDQELVPASEPVWERPWSVEEIRRSSQSWSLAADAGV 43
MMNRTTPDQEL PASEPVWERPWSVEEIRRSSQSWSLAADAG+
Sbjct: 1 MMNRTTPDQELAPASEPVWERPWSVEEIRRSSQSWSLAADAGL 43
>gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo
sapiens]
Length = 420
Score = 30.4 bits (67), Expect = 0.31
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 21 RPWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAW 58
+P V ++ Q A AG RGG RGR G+G W
Sbjct: 309 QPKEVYRQQQQQQKGGRGAAAGGRGGTRGRGRGQGQNW 346
>gi|239754026 PREDICTED: hypothetical protein [Homo sapiens]
Length = 422
Score = 30.4 bits (67), Expect = 0.31
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 12/66 (18%)
Query: 22 PWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAWLA--------RRRAGPRLPLHLA 73
P E S W A AG RG R S RG W A R AGP +PL
Sbjct: 317 PCLEEPAAGDSDPW---AGAGPRGHGRSSLSARGPRWFAGQDRARELRSLAGPLIPLP-R 372
Query: 74 RPVACP 79
PV CP
Sbjct: 373 FPVLCP 378
>gi|239748557 PREDICTED: hypothetical protein XP_002346722 [Homo
sapiens]
Length = 422
Score = 30.4 bits (67), Expect = 0.31
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 12/66 (18%)
Query: 22 PWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAWLA--------RRRAGPRLPLHLA 73
P E S W A AG RG R S RG W A R AGP +PL
Sbjct: 317 PCLEEPAAGDSDPW---AGAGPRGHGRSSLSARGPRWFAGQDRARELRSLAGPLIPLP-R 372
Query: 74 RPVACP 79
PV CP
Sbjct: 373 FPVLCP 378
>gi|239742540 PREDICTED: hypothetical protein XP_002342571 [Homo
sapiens]
Length = 422
Score = 30.4 bits (67), Expect = 0.31
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 12/66 (18%)
Query: 22 PWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAWLA--------RRRAGPRLPLHLA 73
P E S W A AG RG R S RG W A R AGP +PL
Sbjct: 317 PCLEEPAAGDSDPW---AGAGPRGHGRSSLSARGPRWFAGQDRARELRSLAGPLIPLP-R 372
Query: 74 RPVACP 79
PV CP
Sbjct: 373 FPVLCP 378
>gi|239756806 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 28.9 bits (63), Expect = 0.91
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 48 RGRESGRGDAW----LARRRAGPRLPLHLARPVACPL 80
R R+S G ++ RR GP L +H AR +ACP+
Sbjct: 42 RSRDSSGGSSFRLLRCGRRWRGPALAVHAARLLACPV 78
>gi|239751296 PREDICTED: hypothetical protein XP_002347798 [Homo
sapiens]
Length = 211
Score = 28.9 bits (63), Expect = 0.91
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 48 RGRESGRGDAW----LARRRAGPRLPLHLARPVACPL 80
R R+S G ++ RR GP L +H AR +ACP+
Sbjct: 42 RSRDSSGGSSFRLLRCGRRWRGPALAVHAARLLACPV 78
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 28.9 bits (63), Expect = 0.91
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 26 EEIRRSSQSWSLAADAGVRGGPRGRESGRGDAWLARRRAGPRLPLHLARPV 76
E R S++ ++D+G P R G A A RA PR PL PV
Sbjct: 219 ERARGCSEASRTSSDSGPSRAPAARVVGGEAAATAAARARPRAPLAAGSPV 269
>gi|239745793 PREDICTED: hypothetical protein XP_002343590 [Homo
sapiens]
Length = 211
Score = 28.9 bits (63), Expect = 0.91
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 48 RGRESGRGDAW----LARRRAGPRLPLHLARPVACPL 80
R R+S G ++ RR GP L +H AR +ACP+
Sbjct: 42 RSRDSSGGSSFRLLRCGRRWRGPALAVHAARLLACPV 78
>gi|122937327 BTB (POZ) domain containing 17 [Homo sapiens]
Length = 478
Score = 28.9 bits (63), Expect = 0.91
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 17 PVWERPWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAW 58
P W PW + R +S S GP G ++GR W
Sbjct: 319 PAWGAPWVINNPARDDRSTSFQTQL----GPSGHDAGRRVTW 356
>gi|195972890 unc-84 homolog A isoform a [Homo sapiens]
Length = 785
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 9 QELVPASEPVWERPWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAWLARRRA 64
Q+ V PV + W + E W L D ++GG + G GD A A
Sbjct: 125 QDAVTRRPPVLDESW-IREQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGAAAATA 179
>gi|110227866 unc-84 homolog A isoform b [Homo sapiens]
Length = 702
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 9 QELVPASEPVWERPWSVEEIRRSSQSWSLAADAGVRGGPRGRESGRGDAWLARRRA 64
Q+ V PV + W + E W L D ++GG + G GD A A
Sbjct: 75 QDAVTRRPPVLDESW-IREQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGAAAATA 129
>gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens]
Length = 689
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 13 PASEPVWERPWSVEEIRRSSQSWSLAADAGVRGGPRG-RESGRGDAWLARRRAGPRLP 69
P + V P S R + S ++AG RGG +G +E GRG +W R LP
Sbjct: 346 PPAASVISAPPSSSSRHRKRRRTSSKSEAGARGGGQGSKEKGRG-SWGGRHHHHHPLP 402
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 5 TTPDQELVPASEPVWE--RPWSVEEIRRSSQSWSLAADAGVRGGP 47
T P+++LV P RPWSV +RR ++ LA GP
Sbjct: 487 TLPEEQLVVPDLPTCALPRPWSVPPLRRGNRKQELAVALIAGWGP 531
>gi|239756051 PREDICTED: hypothetical protein XP_002344785 [Homo
sapiens]
Length = 132
Score = 27.7 bits (60), Expect = 2.0
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 9/56 (16%)
Query: 29 RRSSQSWSLAADAGVRGGPRGRESGRGDAWLARRRAGPRLPLHLARPVACPLRNTR 84
RR + L+ G G RGR+SG RRR G R HLA P C L R
Sbjct: 67 RRPPRGLQLSLLCGRPAGLRGRDSG-------RRRRGGRELCHLATP--CRLMTRR 113
>gi|239750558 PREDICTED: hypothetical protein [Homo sapiens]
Length = 132
Score = 27.7 bits (60), Expect = 2.0
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 9/56 (16%)
Query: 29 RRSSQSWSLAADAGVRGGPRGRESGRGDAWLARRRAGPRLPLHLARPVACPLRNTR 84
RR + L+ G G RGR+SG RRR G R HLA P C L R
Sbjct: 67 RRPPRGLQLSLLCGRPAGLRGRDSG-------RRRRGGRELCHLATP--CRLMTRR 113
>gi|239744855 PREDICTED: hypothetical protein XP_002344122 [Homo
sapiens]
Length = 132
Score = 27.7 bits (60), Expect = 2.0
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 9/56 (16%)
Query: 29 RRSSQSWSLAADAGVRGGPRGRESGRGDAWLARRRAGPRLPLHLARPVACPLRNTR 84
RR + L+ G G RGR+SG RRR G R HLA P C L R
Sbjct: 67 RRPPRGLQLSLLCGRPAGLRGRDSG-------RRRRGGRELCHLATP--CRLMTRR 113
>gi|47933339 RNA binding motif protein 15 [Homo sapiens]
Length = 977
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 11/59 (18%)
Query: 7 PDQELVPASEPVWERPWS-----------VEEIRRSSQSWSLAADAGVRGGPRGRESGR 54
PD + VP PV ER ++ + R WSL D G R P R+ R
Sbjct: 582 PDSDWVPPPPPVRERSTRTAATSVPAYEPLDSLDRRRDGWSLDRDRGDRDLPSSRDQPR 640
>gi|239744898 PREDICTED: hypothetical protein XP_002343297 [Homo
sapiens]
Length = 210
Score = 26.9 bits (58), Expect = 3.5
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 13/59 (22%)
Query: 36 SLAADAGVRGGPRGRESGRGDAWLARR-------------RAGPRLPLHLARPVACPLR 81
S AA + GP R R +W RR RAGPR + LA P A LR
Sbjct: 71 SKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPAARGLR 129
>gi|155029552 hypothetical protein LOC388115 [Homo sapiens]
Length = 534
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 19 WERPWSVEEIRRSSQSWSL-----AADAGVRGGPRGRE 51
W RPW +++ + + Q S A AG R GPR +
Sbjct: 260 WRRPWDLDKAKSTLQDCSQLRGEGPARAGSRRGPRSHQ 297
>gi|239757267 PREDICTED: hypothetical protein XP_002345242 [Homo
sapiens]
Length = 73
Score = 26.6 bits (57), Expect = 4.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 30 RSSQSWSLAADAGVRGGPRGRESGRGDAWLARRRAGPRLPL 70
R+ W L D +R G G+ S R L RRA P LP+
Sbjct: 34 RTGPQWPLGND--LRQGKGGKRSARRALGLVVRRARPVLPM 72
>gi|239751770 PREDICTED: hypothetical protein XP_002348010 [Homo
sapiens]
Length = 73
Score = 26.6 bits (57), Expect = 4.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 30 RSSQSWSLAADAGVRGGPRGRESGRGDAWLARRRAGPRLPL 70
R+ W L D +R G G+ S R L RRA P LP+
Sbjct: 34 RNGPQWPLGND--LRQGKGGKRSARRALGLVVRRARPVLPM 72
>gi|239746265 PREDICTED: hypothetical protein XP_002343686 [Homo
sapiens]
Length = 73
Score = 26.6 bits (57), Expect = 4.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 30 RSSQSWSLAADAGVRGGPRGRESGRGDAWLARRRAGPRLPL 70
R+ W L D +R G G+ S R L RRA P LP+
Sbjct: 34 RNGPQWPLGND--LRQGKGGKRSARRALGLVVRRARPVLPM 72
>gi|95147335 inositol 1,4,5-triphosphate receptor, type 2 [Homo
sapiens]
Length = 2701
Score = 26.6 bits (57), Expect = 4.5
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 28 IRRSSQSWSLAADAGVRGGPRGRESGRGDAW 58
++R++ W L+A R GPR +E+ G AW
Sbjct: 1571 VQRAAMGWRLSA----RSGPRFKEALGGPAW 1597
>gi|239755899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 459
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Query: 46 GPRGRESGRGD--AWLARR 62
G RGRE GRGD AW A R
Sbjct: 348 GRRGREEGRGDAVAWRASR 366
>gi|239750388 PREDICTED: hypothetical protein XP_002347412 [Homo
sapiens]
Length = 459
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Query: 46 GPRGRESGRGD--AWLARR 62
G RGRE GRGD AW A R
Sbjct: 348 GRRGREEGRGDAVAWRASR 366
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 8/32 (25%)
Query: 44 RGGPRGRESGRGDAWLARRRAGPRLPLHLARP 75
R GPRGR RG +GP P HL P
Sbjct: 226 REGPRGRAESRG--------SGPAQPAHLPLP 249
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 8/32 (25%)
Query: 44 RGGPRGRESGRGDAWLARRRAGPRLPLHLARP 75
R GPRGR RG +GP P HL P
Sbjct: 226 REGPRGRAESRG--------SGPAQPAHLPLP 249
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,198,800
Number of Sequences: 37866
Number of extensions: 187646
Number of successful extensions: 845
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 820
Number of HSP's gapped (non-prelim): 49
length of query: 86
length of database: 18,247,518
effective HSP length: 58
effective length of query: 28
effective length of database: 16,051,290
effective search space: 449436120
effective search space used: 449436120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.