Guide to the Human Genome
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Name: LOC100134102 Sequence: fasta or formatted (86aa) NCBI GI: 169194762
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5          9           2
 C cysteine            1.2          1           1
 D aspartate           3.5          3           1
 E glutamate           7.0          6           2
 F phenylalanine       0.0          0           0
 G glycine             8.1          7           2
 H histidine           1.2          1           1
 I isoleucine          1.2          1           1
 K lysine              0.0          0           0
 L leucine             8.1          7           1
 M methionine          2.3          2           2
 N asparagine          2.3          2           1
 P proline            11.6         10           1
 Q glutamine           2.3          2           1
 R arginine           17.4         15           3
 S serine              8.1          7           2
 T threonine           3.5          3           2
 V valine              7.0          6           1
 W tryptophan          4.7          4           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FAM21C                0.420   hypothetical protein LOC253725 
FAM21A                0.414   hypothetical protein LOC387680 
HNRPDL                0.032   heterogeneous nuclear ribonucleoprotein D-like [Homo...
LOC100292294          0.032   PREDICTED: hypothetical protein 
LOC100289924          0.032   PREDICTED: hypothetical protein XP_002346722 
LOC100287776          0.032   PREDICTED: hypothetical protein XP_002342571 
LOC100293167          0.025   PREDICTED: hypothetical protein 
LOC100290803          0.025   PREDICTED: hypothetical protein XP_002347798 
LOC100287250          0.025   PREDICTED: hypothetical protein XP_002344493 
LOC100287525          0.025   PREDICTED: hypothetical protein XP_002343590 
BTBD17                0.025   BTB (POZ) domain containing 17 
UNC84A                0.019   unc-84 homolog A isoform a 
UNC84A                0.019   unc-84 homolog A isoform b 
MEPCE                 0.019   bin3, bicoid-interacting 3 
PRIC285               0.019   PPAR-alpha interacting complex protein 285 isoform ...
LOC100291617          0.019   PREDICTED: hypothetical protein XP_002344785 
LOC100286897          0.019   PREDICTED: hypothetical protein 
LOC100286897          0.019   PREDICTED: hypothetical protein XP_002344122 
RBM15                 0.013   RNA binding motif protein 15 
LOC100287820          0.013   PREDICTED: hypothetical protein XP_002343297 
C15orf52              0.013   hypothetical protein LOC388115 
LOC100291727          0.013   PREDICTED: hypothetical protein XP_002345242 
LOC100290083          0.013   PREDICTED: hypothetical protein XP_002348010 
LOC100289217          0.013   PREDICTED: hypothetical protein XP_002343686 
ITPR2                 0.013   inositol 1,4,5-triphosphate receptor, type 2 
LOC100292296          0.006   PREDICTED: hypothetical protein 
LOC100290476          0.006   PREDICTED: hypothetical protein XP_002347412 
LOC100127891          0.006   PREDICTED: similar to hCG2042508 
LOC100127891          0.006   PREDICTED: similar to hCG2042508 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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