Search of human proteins with 169177307

Search of human proteins with 169177307

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]
         (223 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]           469   e-132
gi|169177385 PREDICTED: hypothetical protein [Homo sapiens]           460   e-130
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]           207   4e-54
gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]           150   8e-37
gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]           150   8e-37
gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]           150   8e-37
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    42   4e-04
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]            38   0.006
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ...    38   0.006
gi|169170823 PREDICTED: hypothetical protein [Homo sapiens]            38   0.008
gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Hom...    37   0.010
gi|113411427 PREDICTED: hypothetical protein [Homo sapiens]            37   0.010
gi|163965366 nascent polypeptide-associated complex alpha subuni...    37   0.010
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]           37   0.018
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]           37   0.018
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]           37   0.018
gi|169171345 PREDICTED: hypothetical protein [Homo sapiens]            36   0.023
gi|169172205 PREDICTED: hypothetical protein [Homo sapiens]            36   0.023
gi|169170949 PREDICTED: hypothetical protein [Homo sapiens]            36   0.023
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]        36   0.030
gi|4885075 atonal homolog 1 [Homo sapiens]                             36   0.030
gi|239757363 PREDICTED: hypothetical protein isoform 1 [Homo sap...    35   0.039
gi|239751921 PREDICTED: hypothetical protein isoform 1 [Homo sap...    35   0.039
gi|239746411 PREDICTED: hypothetical protein XP_002343707 isofor...    35   0.039
gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo ...    35   0.051
gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo s...    35   0.051
gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo ...    35   0.051
gi|169172081 PREDICTED: hypothetical protein [Homo sapiens]            35   0.051
gi|169171580 PREDICTED: hypothetical protein [Homo sapiens]            35   0.051
gi|113419324 PREDICTED: hypothetical protein [Homo sapiens]            35   0.051

>gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 223

 Score =  469 bits (1206), Expect = e-132
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
           MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN
Sbjct: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60

Query: 61  RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQA 120
           RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQA
Sbjct: 61  RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQA 120

Query: 121 TPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR 180
           TPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR
Sbjct: 121 TPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR 180

Query: 181 RGAGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVIL 223
           RGAGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVIL
Sbjct: 181 RGAGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVIL 223


>gi|169177385 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 223

 Score =  460 bits (1183), Expect = e-130
 Identities = 218/223 (97%), Positives = 219/223 (98%)

Query: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
           MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN
Sbjct: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60

Query: 61  RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQA 120
           RPSALSPVAAEGPWLEVSSSGIGGAGRGQGL GSQAR TCDPEAAQAMLTTWAPSYRRQA
Sbjct: 61  RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQA 120

Query: 121 TPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR 180
           TPKLAGAPSLADPG+DVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR
Sbjct: 121 TPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR 180

Query: 181 RGAGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVIL 223
           RG GVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCV L
Sbjct: 181 RGVGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVFL 223


>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 292

 Score =  207 bits (528), Expect = 4e-54
 Identities = 98/109 (89%), Positives = 99/109 (90%)

Query: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
           MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 153 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 212

Query: 61  RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAML 109
           RPSA S VA E PWLEVSSSG GG GRGQGL GSQARGT DPEAAQAML
Sbjct: 213 RPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAAQAML 261



 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 36/67 (53%), Positives = 41/67 (61%), Gaps = 4/67 (5%)

Query: 120 ATPKLAGAPSLADPGMDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRW---LRTAPGAAPT 175
           ATP+ A APS+A+PG  + VAAAKPG L  GGGCTGA T+  P        R    AAP 
Sbjct: 65  ATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPI 124

Query: 176 SLRRRRG 182
           SLR R G
Sbjct: 125 SLRWRSG 131


>gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score =  150 bits (379), Expect = 8e-37
 Identities = 67/73 (91%), Positives = 68/73 (93%)

Query: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
           MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 173 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 232

Query: 61  RPSALSPVAAEGP 73
           RPSA SPVA E P
Sbjct: 233 RPSAPSPVAVEDP 245



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 4/67 (5%)

Query: 120 ATPKLAGAPSLADPGMDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRW---LRTAPGAAPT 175
           ATP+ A +PS+A+PG  + VAA KP  L  GGGCTGA T+  P        R    AA  
Sbjct: 85  ATPEPARSPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQI 144

Query: 176 SLRRRRG 182
           SLR R G
Sbjct: 145 SLRWRSG 151


>gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 218

 Score =  150 bits (379), Expect = 8e-37
 Identities = 67/73 (91%), Positives = 68/73 (93%)

Query: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
           MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 146 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 205

Query: 61  RPSALSPVAAEGP 73
           RPSA SPVA E P
Sbjct: 206 RPSAPSPVAVEDP 218



 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 4/67 (5%)

Query: 120 ATPKLAGAPSLADPGMDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRW---LRTAPGAAPT 175
           ATP+ A APS+A+PG  + VAA KP  L  GGGCTGA T+  P        R    AA  
Sbjct: 58  ATPEPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQI 117

Query: 176 SLRRRRG 182
           SLR R G
Sbjct: 118 SLRWRSG 124


>gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score =  150 bits (379), Expect = 8e-37
 Identities = 67/73 (91%), Positives = 68/73 (93%)

Query: 1   MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
           MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 173 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 232

Query: 61  RPSALSPVAAEGP 73
           RPSA SPVA E P
Sbjct: 233 RPSAPSPVAVEDP 245



 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 4/67 (5%)

Query: 120 ATPKLAGAPSLADPGMDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRW---LRTAPGAAPT 175
           ATP+ A APS+A+PG  + VAA KP  L  GGGCTGA T+  P        R    AA  
Sbjct: 85  ATPEPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQI 144

Query: 176 SLRRRRG 182
           SLR R G
Sbjct: 145 SLRWRSG 151


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 42/136 (30%), Positives = 55/136 (40%), Gaps = 20/136 (14%)

Query: 44   CGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPE 103
            CGQ ++        G  R  + SP  A  P LE +  G G    G+    ++A G    +
Sbjct: 1303 CGQKKQRL------GEQRERSASPQRAARPRLEEAPGGQGRPEAGRPASEARAPGLAAAD 1356

Query: 104  AAQAMLTTWAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGG-----LLGGGCTGAGTD 158
            AA A     A +  ++A    AG+      G   A A A PGG     L   G  GA   
Sbjct: 1357 AADA-----ARAGGKEAPRAAAGSELCRREGPGAAPAFAGPGGGGSGALEAEGRAGARAG 1411

Query: 159  PQPHPRWLRTAPGAAP 174
            P+P PR     PG AP
Sbjct: 1412 PRPGPR----PPGGAP 1423


>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 160 QPHPRWLRTAPGAAPTSLR-----RRRGAGVTARQALRREGMRACDSGT----YRASPGE 210
           +P P WLR A G  PT +R     R RG   T+RQ   R+     D GT     RA PG 
Sbjct: 2   EPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGG 61

Query: 211 PG 212
            G
Sbjct: 62  EG 63


>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
           sapiens]
          Length = 211

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 160 QPHPRWLRTAPGAAPTSLR-----RRRGAGVTARQALRREGMRACDSGT----YRASPGE 210
           +P P WLR A G  PT +R     R RG   T+RQ   R+     D GT     RA PG 
Sbjct: 2   EPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGG 61

Query: 211 PG 212
            G
Sbjct: 62  EG 63


>gi|169170823 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 205

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 35/100 (35%), Positives = 41/100 (41%), Gaps = 13/100 (13%)

Query: 39  RCPCGCGQARRSALQQL-HGGGNRP---SALSPVAAEGPWLEVSSSG---------IGGA 85
           RCP   G    SAL  + H GG  P   SALSP   E P  ++S+           I   
Sbjct: 99  RCPPDGGATPVSALSAVPHDGGAAPVSLSALSPTTEEPPQSQLSALSPTTEELPQHIQRH 158

Query: 86  GRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQATPKLA 125
           GRG  LGGS  R   DP     +L       R Q  P L+
Sbjct: 159 GRGTILGGSGHRSYLDPAGETQLLLREQLLRRMQPNPPLS 198


>gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Homo
           sapiens]
          Length = 501

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 42/157 (26%), Positives = 57/157 (36%), Gaps = 22/157 (14%)

Query: 43  GCGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDP 102
           GCG +   A +   G    P      +A    L V    +  A +  G  G+  R +  P
Sbjct: 219 GCGPS--GATRPKTGAQPHPGGCGVPSARSCALGVGQEQLARAAQPMGPLGAAGRSSGKP 276

Query: 103 E-----AAQAMLTTWAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGT 157
                 AA A  +TW+   R    P  A A S ADPG  +A A+    G   G       
Sbjct: 277 RQPTGAAAAAATSTWSRGPRGLGIPDQACASSRADPGASLAAASQAVCGRSAG------- 329

Query: 158 DPQPHPRWLRTAPGAAPTSLRRRRGAGVTARQALRRE 194
                   LR  PG       R  G  + A++A+ RE
Sbjct: 330 ------HGLR--PGVQEARTLRPDGGALRAQEAIPRE 358


>gi|113411427 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 268

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 43/158 (27%), Positives = 60/158 (37%), Gaps = 36/158 (22%)

Query: 14  PSVCRQQPPGNSRVRPHFPHLGTRARCP---CGCGQARRSALQQLHGGGNRPSALSPVAA 70
           PS+C+ +    SR    +       RCP    G G++ R+   +LH   +RP  LSP+  
Sbjct: 75  PSLCQSEGTRWSRRGRRWAE-----RCPPGVLGAGRSLRAQRSRLH---SRPPPLSPLRK 126

Query: 71  EGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQATPKLAGAPSL 130
                       GG+ + +    +  +  C     QA+ TTW   Y           P  
Sbjct: 127 P-----------GGSNQPRSAAAAGTQEAC----LQALGTTWGWKYH--------ALPLR 163

Query: 131 ADPGMDVAVAAAKPGGL--LGGGCTGAGTDPQPHPRWL 166
            DP    A +A K G    LGGG  G G    P   WL
Sbjct: 164 LDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWL 201


>gi|163965366 nascent polypeptide-associated complex alpha subunit
           isoform a [Homo sapiens]
          Length = 2078

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 15/122 (12%)

Query: 58  GGNRPSALSPVAAEG---PWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAP 114
           G   PSA++P++ +G   P  E  +  +      +     +   T  P+ A A+  T + 
Sbjct: 863 GAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPK-----EGPATPAPKQAPALSMTSSS 917

Query: 115 SYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAP 174
             + +ATP   G P+   P       AA P    GG  T       P P+W  T P A P
Sbjct: 918 PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPAT-------PSPKWAPTPPAATP 970

Query: 175 TS 176
            S
Sbjct: 971 PS 972



 Score = 29.3 bits (64), Expect = 2.8
 Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 112  WAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCT----GAGTDPQPHPRWLR 167
            WAP+      P   G P+   P       AA P    GG  T    GA T P   P   +
Sbjct: 961  WAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPK 1020

Query: 168  TAPGAAP 174
             +P A P
Sbjct: 1021 GSPAATP 1027



 Score = 28.1 bits (61), Expect = 6.3
 Identities = 48/182 (26%), Positives = 57/182 (31%), Gaps = 37/182 (20%)

Query: 13   PPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPS---ALSPVA 69
            PP+     P G+    P           P G      + L    GG   PS   A +P A
Sbjct: 1035 PPAATPPSPKGSPAATP----------LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPA 1084

Query: 70   AEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQATPKLAGAPS 129
            A  P      S  GG       G         P     + T   P ++   T   A  PS
Sbjct: 1085 ATPP------SPKGGPATPSPKGAPMPPAATPPSPKGGLAT---PPHKGAPTTPAATPPS 1135

Query: 130  ----LADP---GMDVAVAAAKP---GGLL-----GGGCTGAGTDPQPHPRWLRTAPGAAP 174
                LA P   G     AA  P   GGL      G   T A T P P       +P  AP
Sbjct: 1136 PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAP 1195

Query: 175  TS 176
            T+
Sbjct: 1196 TT 1197


>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 49/175 (28%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 46  QARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGL-----GGSQARGTC 100
           QAR  A  +  G  + P         GP L   +    G  +G G      G S A    
Sbjct: 59  QARTPAPPRERGESSSP--------RGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAP 110

Query: 101 DPEAAQAMLTTWAPSYRRQATPKLAGA---PSLADPGMDVAVAAAKPGGLLGGGCTGAGT 157
            P  A     T +P       PK  G    P     G +  VA      +   G  G G 
Sbjct: 111 HPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRV---GKLGKGP 167

Query: 158 DPQPHPRWLRTAPGAAPTSLRRRRGAGVTARQALRREGMRACDSGTYRASPGEPG 212
            P+P P   R  PGA    L R   A   A Q LR    R  +    R +PG PG
Sbjct: 168 PPRPAPPGTRCCPGARAAQLLREAAA---AAQGLRAPAARLPE--PTRRAPGRPG 217


>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 49/175 (28%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 46  QARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGL-----GGSQARGTC 100
           QAR  A  +  G  + P         GP L   +    G  +G G      G S A    
Sbjct: 59  QARTPAPPRERGESSSP--------RGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAP 110

Query: 101 DPEAAQAMLTTWAPSYRRQATPKLAGA---PSLADPGMDVAVAAAKPGGLLGGGCTGAGT 157
            P  A     T +P       PK  G    P     G +  VA      +   G  G G 
Sbjct: 111 HPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRV---GKLGKGP 167

Query: 158 DPQPHPRWLRTAPGAAPTSLRRRRGAGVTARQALRREGMRACDSGTYRASPGEPG 212
            P+P P   R  PGA    L R   A   A Q LR    R  +    R +PG PG
Sbjct: 168 PPRPAPPGTRCCPGARAAQLLREAAA---AAQGLRAPAARLPE--PTRRAPGRPG 217


>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 49/175 (28%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 46  QARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGL-----GGSQARGTC 100
           QAR  A  +  G  + P         GP L   +    G  +G G      G S A    
Sbjct: 59  QARTPAPPRERGESSSP--------RGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAP 110

Query: 101 DPEAAQAMLTTWAPSYRRQATPKLAGA---PSLADPGMDVAVAAAKPGGLLGGGCTGAGT 157
            P  A     T +P       PK  G    P     G +  VA      +   G  G G 
Sbjct: 111 HPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRV---GKLGKGP 167

Query: 158 DPQPHPRWLRTAPGAAPTSLRRRRGAGVTARQALRREGMRACDSGTYRASPGEPG 212
            P+P P   R  PGA    L R   A   A Q LR    R  +    R +PG PG
Sbjct: 168 PPRPAPPGTRCCPGARAAQLLREAAA---AAQGLRAPAARLPE--PTRRAPGRPG 217


>gi|169171345 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 249

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 48/167 (28%), Positives = 59/167 (35%), Gaps = 25/167 (14%)

Query: 6   AWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPSAL 65
           AW+P   P      QPPG          L TRA  P G  +A     ++ H    +P   
Sbjct: 22  AWSPAPAPARPPLNQPPGGKA-------LSTRALQPGGALEAGTRGGREGHRRLRQPP-- 72

Query: 66  SPVAAEGPWLEVS--------SSGIGGAGRGQGLGG--SQAR-GTCDPEAAQAMLTTWAP 114
           +P A  G  L           SS       G+GL G   Q R G   P      +T   P
Sbjct: 73  TPSAPPGSPLHEGFLLIALFPSSQNRHRSAGRGLAGRLQQVRPGAAGPRGRLPWVTGPRP 132

Query: 115 SYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQP 161
           +    + P     P    PG D A   A+  G   GGC  A   PQP
Sbjct: 133 A---GSLPAAQSPPPAERPGRDAA--GARVCGTQRGGCARAAEAPQP 174


>gi|169172205 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 249

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 48/167 (28%), Positives = 59/167 (35%), Gaps = 25/167 (14%)

Query: 6   AWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPSAL 65
           AW+P   P      QPPG          L TRA  P G  +A     ++ H    +P   
Sbjct: 22  AWSPAPAPARPPLNQPPGGKA-------LSTRALQPGGALEAGTRGGREGHRRLRQPP-- 72

Query: 66  SPVAAEGPWLEVS--------SSGIGGAGRGQGLGG--SQAR-GTCDPEAAQAMLTTWAP 114
           +P A  G  L           SS       G+GL G   Q R G   P      +T   P
Sbjct: 73  TPSAPPGSPLHEGFLLIALFPSSQNRHRSAGRGLAGRLQQVRPGAAGPRGRLPWVTGPRP 132

Query: 115 SYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQP 161
           +    + P     P    PG D A   A+  G   GGC  A   PQP
Sbjct: 133 A---GSLPAAQSPPPAERPGRDAA--GARVCGTQRGGCARAAEAPQP 174


>gi|169170949 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 249

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 48/167 (28%), Positives = 59/167 (35%), Gaps = 25/167 (14%)

Query: 6   AWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPSAL 65
           AW+P   P      QPPG          L TRA  P G  +A     ++ H    +P   
Sbjct: 22  AWSPAPAPARPPLNQPPGGKA-------LSTRALQPGGALEAGTRGGREGHRRLRQPP-- 72

Query: 66  SPVAAEGPWLEVS--------SSGIGGAGRGQGLGG--SQAR-GTCDPEAAQAMLTTWAP 114
           +P A  G  L           SS       G+GL G   Q R G   P      +T   P
Sbjct: 73  TPSAPPGSPLHEGFLLIALFPSSQNRHRSAGRGLAGRLQQVRPGAAGPRGRLPWVTGPRP 132

Query: 115 SYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQP 161
           +    + P     P    PG D A   A+  G   GGC  A   PQP
Sbjct: 133 A---GSLPAAQSPPPAERPGRDAA--GARVCGTQRGGCARAAEAPQP 174


>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
          Length = 753

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 50/190 (26%), Positives = 68/190 (35%), Gaps = 37/190 (19%)

Query: 11  LQPPSVCRQQPPGNSRVRPHF-PHLGTRARC-----PCGCGQARRSALQQLHGGGNRPSA 64
           + PP  C  Q  G+  V+    P   TR +      P GC   R  +++    G  +   
Sbjct: 10  IAPPHTCPSQDSGDRVVKSGCGPSGATRPKTGAQPHPRGC---RVPSVRSCALGAGQEQL 66

Query: 65  LSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQATPKL 124
                  GP        +G AGR  G    Q  G     AA A  +TW+   R    P  
Sbjct: 67  ARAAQPVGP--------LGAAGRSSGKP-RQPTGA----AAAAATSTWSRGPRGLGIPDQ 113

Query: 125 AGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRRRGAG 184
           A A S ADPG  +A A+      + G   G G             PG       R  G  
Sbjct: 114 ACASSRADPGASLAAASQ----AVCGRSAGHG-----------LPPGVQEARTLRPDGGA 158

Query: 185 VTARQALRRE 194
           + A++A+ RE
Sbjct: 159 LRAQEAIPRE 168


>gi|4885075 atonal homolog 1 [Homo sapiens]
          Length = 354

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 20/53 (37%), Positives = 24/53 (45%)

Query: 11  LQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPS 63
           LQ PS   Q PP  +  +    HL T A    G G A  +  QQ  GG  RP+
Sbjct: 215 LQTPSGGEQPPPPPASCKSDHHHLRTAASYEGGAGNATAAGAQQASGGSQRPT 267


>gi|239757363 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 169

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 10/129 (7%)

Query: 36  TRARCPCGCGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQ 95
           T++  P GC +ARRS       GG R     P+     W  + +  I  AG  +  GGS+
Sbjct: 31  TKSALP-GCARARRSKASTKVSGGCRLK--HPLIFRPRW-RILAKKITSAGSQRSPGGSR 86

Query: 96  ARGTCDPEAAQAMLTTWAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGA 155
           A       AA A L+ W      Q      G  ++A P     V + +    +    TG 
Sbjct: 87  AGRRVSARAAAARLSPWGTQGPSQ------GRANMASPSSTQHVGSPRSQRRVKATATGH 140

Query: 156 GTDPQPHPR 164
              P+P  R
Sbjct: 141 TGCPRPQSR 149


>gi|239751921 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 169

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 10/129 (7%)

Query: 36  TRARCPCGCGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQ 95
           T++  P GC +ARRS       GG R     P+     W  + +  I  AG  +  GGS+
Sbjct: 31  TKSALP-GCARARRSKASTKVSGGCRLK--HPLIFRPRW-RILAKKITSAGSQRSPGGSR 86

Query: 96  ARGTCDPEAAQAMLTTWAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGA 155
           A       AA A L+ W      Q      G  ++A P     V + +    +    TG 
Sbjct: 87  AGRRVSARAAAARLSPWGTQGPSQ------GRANMASPSSTQHVGSPRSQRRVKATATGH 140

Query: 156 GTDPQPHPR 164
              P+P  R
Sbjct: 141 TGCPRPQSR 149


>gi|239746411 PREDICTED: hypothetical protein XP_002343707 isoform 1
           [Homo sapiens]
          Length = 169

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 10/129 (7%)

Query: 36  TRARCPCGCGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQ 95
           T++  P GC +ARRS       GG R     P+     W  + +  I  AG  +  GGS+
Sbjct: 31  TKSALP-GCARARRSKASTKVSGGCRLK--HPLIFRPRW-RILAKKITSAGSQRSPGGSR 86

Query: 96  ARGTCDPEAAQAMLTTWAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGA 155
           A       AA A L+ W      Q      G  ++A P     V + +    +    TG 
Sbjct: 87  AGRRVSARAAAARLSPWGTQGPSQ------GRANMASPSSTQHVGSPRSQRRVKATATGH 140

Query: 156 GTDPQPHPR 164
              P+P  R
Sbjct: 141 TGCPRPQSR 149


>gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo
            sapiens]
          Length = 1723

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 41   PCGCGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTC 100
            P     A  +  Q L  G N+   + P              + G   G G   S A G+ 
Sbjct: 1625 PAATPSAPAAGWQSLETGQNQSDPVGPAL-----------NLFGGSTGLGQWSSSAGGSS 1673

Query: 101  DPEAAQAMLTTWAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGG 151
              + A A L  W P      +  L G P++ DP    + A   PG LLGGG
Sbjct: 1674 GADLAGASL--WGPP---NYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGG 1719


>gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo
            sapiens]
          Length = 1029

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 41   PCGCGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTC 100
            P     A  +  Q L  G N+   + P              + G   G G   S A G+ 
Sbjct: 931  PAATPSAPAAGWQSLETGQNQSDPVGPAL-----------NLFGGSTGLGQWSSSAGGSS 979

Query: 101  DPEAAQAMLTTWAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGG 151
              + A A L  W P      +  L G P++ DP    + A   PG LLGGG
Sbjct: 980  GADLAGASL--WGPP---NYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGG 1025


>gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo
            sapiens]
          Length = 1833

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 41   PCGCGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTC 100
            P     A  +  Q L  G N+   + P              + G   G G   S A G+ 
Sbjct: 1735 PAATPSAPAAGWQSLETGQNQSDPVGPAL-----------NLFGGSTGLGQWSSSAGGSS 1783

Query: 101  DPEAAQAMLTTWAPSYRRQATPKLAGAPSLADPGMDVAVAAAKPGGLLGGG 151
              + A A L  W P      +  L G P++ DP    + A   PG LLGGG
Sbjct: 1784 GADLAGASL--WGPP---NYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGG 1829


>gi|169172081 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 205

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 34/100 (34%), Positives = 40/100 (40%), Gaps = 13/100 (13%)

Query: 39  RCPCGCGQARRSALQQL-HGGGNRP---SALSPVAAEGPWLEVSSSG---------IGGA 85
           RCP   G    SAL  + H GG  P   SALSP   E P  ++S+           I   
Sbjct: 99  RCPPDGGATPVSALSAVPHDGGAAPVSLSALSPTTEEPPQSQLSALSPTTEELPQHIQRH 158

Query: 86  GRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQATPKLA 125
           GRG   GGS  R   DP     +L       R Q  P L+
Sbjct: 159 GRGTIPGGSGHRSYLDPAGETQLLLREQLLRRMQPNPPLS 198


>gi|169171580 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 197

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 86  GRGQGLGGSQARGTCDPEAAQAMLTTWAPSYR-RQATPKLAG--APSLADPGMDVAVAAA 142
           G+  GL G +      PEA    L  +    R R ATP      +P  A P      AA 
Sbjct: 59  GQQAGLRGKRRARRVAPEARPPFLAGYEHQPRPRAATPGFLSFRSPGAAVPSCFPTAAAH 118

Query: 143 KPGGLLGGGCTGA-GTDPQPHPRWLRTAP---GAAPTSLRRRRGAGVTARQALRREGMRA 198
           +  G  G G + +  + P   PR     P   G+ P S RR RG+   AR+AL RE ++ 
Sbjct: 119 RDLGEPGRGPSPSQASGPSRSPRVPPAHPELSGSRPRSPRRPRGSIAAAREAL-RELLKP 177

Query: 199 C 199
           C
Sbjct: 178 C 178


>gi|113419324 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 197

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 86  GRGQGLGGSQARGTCDPEAAQAMLTTWAPSYR-RQATPKLAG--APSLADPGMDVAVAAA 142
           G+  GL G +      PEA    L  +    R R ATP      +P  A P      AA 
Sbjct: 59  GQQAGLRGKRRARRVAPEARPPFLAGYEHQPRPRAATPGFLSFRSPGAAVPSCFPTAAAH 118

Query: 143 KPGGLLGGGCTGA-GTDPQPHPRWLRTAP---GAAPTSLRRRRGAGVTARQALRREGMRA 198
           +  G  G G + +  + P   PR     P   G+ P S RR RG+   AR+AL RE ++ 
Sbjct: 119 RDLGEPGRGPSPSQASGPSRSPRVPPAHPELSGSRPRSPRRPRGSIAAAREAL-RELLKP 177

Query: 199 C 199
           C
Sbjct: 178 C 178


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,798,424
Number of Sequences: 37866
Number of extensions: 696354
Number of successful extensions: 4217
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 3917
Number of HSP's gapped (non-prelim): 509
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.