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Search of human proteins with 169173341
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169173341 PREDICTED: hypothetical protein [Homo sapiens]
(136 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169173341 PREDICTED: hypothetical protein [Homo sapiens] 275 1e-74
gi|169172540 PREDICTED: hypothetical protein [Homo sapiens] 275 1e-74
gi|239743587 PREDICTED: hypothetical protein [Homo sapiens] 275 1e-74
gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens] 31 0.27
gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens] 31 0.27
gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b ... 30 0.61
gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a ... 30 0.61
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 30 0.79
gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sap... 30 0.79
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 29 1.0
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 29 1.0
gi|31415870 dedicator of cytokinesis 3 [Homo sapiens] 29 1.0
gi|4504465 homeobox B2 [Homo sapiens] 29 1.0
gi|157266264 pleckstrin homology-like domain, family B, member 3... 29 1.4
gi|188536004 zinc finger protein 469 [Homo sapiens] 28 1.8
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 28 1.8
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 28 3.0
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 28 3.0
gi|154146199 sal-like 3 [Homo sapiens] 28 3.0
gi|224458301 family with sequence similarity 186, member A [Homo... 27 3.9
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 27 3.9
gi|148226214 t-complex 11 isoform 1 [Homo sapiens] 27 3.9
gi|8924256 t-complex 11 isoform 2 [Homo sapiens] 27 3.9
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 27 3.9
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 27 3.9
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 27 3.9
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 27 3.9
gi|224994173 roundabout 1 isoform d [Homo sapiens] 27 5.1
gi|224994171 roundabout 1 isoform c [Homo sapiens] 27 5.1
gi|19743806 roundabout 1 isoform b [Homo sapiens] 27 5.1
>gi|169173341 PREDICTED: hypothetical protein [Homo sapiens]
Length = 136
Score = 275 bits (702), Expect = 1e-74
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MALKHCEARKRLKLPLESASTLKEILASHCVCSFLAFNLPPRKDTVNKVPSWKQTAAFTR 60
MALKHCEARKRLKLPLESASTLKEILASHCVCSFLAFNLPPRKDTVNKVPSWKQTAAFTR
Sbjct: 1 MALKHCEARKRLKLPLESASTLKEILASHCVCSFLAFNLPPRKDTVNKVPSWKQTAAFTR 60
Query: 61 HQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPF 120
HQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPF
Sbjct: 61 HQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPF 120
Query: 121 LSQLPDVSRRTQSASS 136
LSQLPDVSRRTQSASS
Sbjct: 121 LSQLPDVSRRTQSASS 136
>gi|169172540 PREDICTED: hypothetical protein [Homo sapiens]
Length = 136
Score = 275 bits (702), Expect = 1e-74
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MALKHCEARKRLKLPLESASTLKEILASHCVCSFLAFNLPPRKDTVNKVPSWKQTAAFTR 60
MALKHCEARKRLKLPLESASTLKEILASHCVCSFLAFNLPPRKDTVNKVPSWKQTAAFTR
Sbjct: 1 MALKHCEARKRLKLPLESASTLKEILASHCVCSFLAFNLPPRKDTVNKVPSWKQTAAFTR 60
Query: 61 HQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPF 120
HQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPF
Sbjct: 61 HQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPF 120
Query: 121 LSQLPDVSRRTQSASS 136
LSQLPDVSRRTQSASS
Sbjct: 121 LSQLPDVSRRTQSASS 136
>gi|239743587 PREDICTED: hypothetical protein [Homo sapiens]
Length = 236
Score = 275 bits (702), Expect = 1e-74
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MALKHCEARKRLKLPLESASTLKEILASHCVCSFLAFNLPPRKDTVNKVPSWKQTAAFTR 60
MALKHCEARKRLKLPLESASTLKEILASHCVCSFLAFNLPPRKDTVNKVPSWKQTAAFTR
Sbjct: 101 MALKHCEARKRLKLPLESASTLKEILASHCVCSFLAFNLPPRKDTVNKVPSWKQTAAFTR 160
Query: 61 HQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPF 120
HQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPF
Sbjct: 161 HQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPF 220
Query: 121 LSQLPDVSRRTQSASS 136
LSQLPDVSRRTQSASS
Sbjct: 221 LSQLPDVSRRTQSASS 236
>gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens]
Length = 755
Score = 31.2 bits (69), Expect = 0.27
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 79 ELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFLSQ 123
E L +R ES+A + GGP LPP SP A +P L Q
Sbjct: 93 EKLSVRVAESAAAAPQGGPELPPSPASPPEQPPAPEEREEPPLPQ 137
>gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens]
Length = 560
Score = 31.2 bits (69), Expect = 0.27
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 79 ELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFLSQ 123
E L +R ES+A + GGP LPP SP A +P L Q
Sbjct: 93 EKLSVRVAESAAAAPQGGPELPPSPASPPEQPPAPEEREEPPLPQ 137
>gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b [Homo
sapiens]
Length = 1075
Score = 30.0 bits (66), Expect = 0.61
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 41 PRKDTVNKVPSWKQTAAFTRHQTFW-HLDLALSSLQNRLE------LLPLRAGESSANSE 93
P K +++ S + T TRH + H L +L +E L LR E N+
Sbjct: 902 PDKKALSEGHSMRSTCGSTRHSSLGDHKSLEAEALAEDIEKTMSTALHELRELERQ-NTV 960
Query: 94 PGGP-----TLPPFVKSPEPLSKAASLPTQPFLSQLPDVSRRTQSASS 136
P TL P P P+S + P + + PD + R S+SS
Sbjct: 961 KQAPDVVLDTLEPLKNPPGPVSSEPASPLHTIVIRDPDAAMRRSSSSS 1008
>gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a [Homo
sapiens]
Length = 1099
Score = 30.0 bits (66), Expect = 0.61
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 41 PRKDTVNKVPSWKQTAAFTRHQTFW-HLDLALSSLQNRLE------LLPLRAGESSANSE 93
P K +++ S + T TRH + H L +L +E L LR E N+
Sbjct: 926 PDKKALSEGHSMRSTCGSTRHSSLGDHKSLEAEALAEDIEKTMSTALHELRELERQ-NTV 984
Query: 94 PGGP-----TLPPFVKSPEPLSKAASLPTQPFLSQLPDVSRRTQSASS 136
P TL P P P+S + P + + PD + R S+SS
Sbjct: 985 KQAPDVVLDTLEPLKNPPGPVSSEPASPLHTIVIRDPDAAMRRSSSSS 1032
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 29.6 bits (65), Expect = 0.79
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 85 AGESSANSEPGG--PTLPPFVKSPEPLSKAASLPTQ-PFLSQLPDVSRRTQSASS 136
AG SS S+PGG P + P V + P+ A+ PT P L Q+P + Q ++
Sbjct: 1555 AGVSSYISQPGGLHPLVIPSVIASTPILPQAAGPTSTPLLPQVPSIPPLVQPVAN 1609
Score = 26.6 bits (57), Expect = 6.7
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 20/79 (25%)
Query: 69 LALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVK---------------SPEPLSKAA 113
L + S+ +LP AG +S P P++PP V+ P+P A
Sbjct: 1570 LVIPSVIASTPILPQAAGPTSTPLLPQVPSIPPLVQPVANVPAVQQTLIHSQPQP----A 1625
Query: 114 SLPTQPFLSQLPDVSRRTQ 132
LP QP + P+V TQ
Sbjct: 1626 LLPNQPH-THCPEVDSDTQ 1643
>gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sapiens]
Length = 1258
Score = 29.6 bits (65), Expect = 0.79
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 84 RAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFLSQLP 125
R GE S++ E G TLPP P PL +A + P L LP
Sbjct: 1033 RVGEGSSSDEESGGTLPPPDFPPPPLPDSA-IFLPPSLDPLP 1073
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 29.3 bits (64), Expect = 1.0
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 81 LPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQP 119
LP G S +S PGG +PP P PL +A +P P
Sbjct: 648 LPEGVGIPSPSSLPGGTAIPP----PPPLPGSARIPPPP 682
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 29.3 bits (64), Expect = 1.0
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 81 LPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQP 119
LP G S +S PGG +PP P PL +A +P P
Sbjct: 657 LPEGVGIPSPSSLPGGTAIPP----PPPLPGSARIPPPP 691
>gi|31415870 dedicator of cytokinesis 3 [Homo sapiens]
Length = 2030
Score = 29.3 bits (64), Expect = 1.0
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 40 PPRKDTVNKVPS--WKQTAAFTRHQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGP 97
PPR DT++ +PS W H L+ S++ + ++ P R+ + P P
Sbjct: 1908 PPRTDTMDSMPSQAWNADEDLEPPYLPVHYSLSESAVLDSIKAQPCRSHSAPGCVIPQDP 1967
Query: 98 TLPPFVKSPEPLSKAASLPTQPFLSQLP 125
PP +LP +P+ +LP
Sbjct: 1968 MDPP------------ALPPKPYHPRLP 1983
>gi|4504465 homeobox B2 [Homo sapiens]
Length = 356
Score = 29.3 bits (64), Expect = 1.0
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 12/75 (16%)
Query: 62 QTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFL 121
QTF L S+LQ S GP LPP P PL A P P++
Sbjct: 51 QTFPSLQPGASTLQR----------PRSQKRAEDGPALPP--PPPPPLPAAPPAPEFPWM 98
Query: 122 SQLPDVSRRTQSASS 136
+ + +QSA+S
Sbjct: 99 KEKKSAKKPSQSATS 113
>gi|157266264 pleckstrin homology-like domain, family B, member 3
[Homo sapiens]
Length = 640
Score = 28.9 bits (63), Expect = 1.4
Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 7/90 (7%)
Query: 26 LASHCVCSFLAFNLPPRKDTVNKVPSW------KQTAAFTRHQTFWHLDLALS-SLQNRL 78
L+ HC S A LPP + P + + + H H++ L ++ R
Sbjct: 411 LSFHCTESLEASALPPAVGDSGRYPLYQLLNCGRGNSCGAIHPDIAHMERLLQQAMAERE 470
Query: 79 ELLPLRAGESSANSEPGGPTLPPFVKSPEP 108
LL R G GP +P P P
Sbjct: 471 RLLKAREGTRRGTEGSSGPAVPAITAPPTP 500
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 28.5 bits (62), Expect = 1.8
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 86 GESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFLSQLPDV 127
GE + + EP P PP EP +AAS PT S PD+
Sbjct: 1391 GEDAGSLEPQLPRSPPGTAETEP-GRAASPPTLESSSLFPDL 1431
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 28.5 bits (62), Expect = 1.8
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 66 HLDLALSSLQNRLELLP---LRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFLS 122
H+ + +L +R+E LP R G +S+P P PP V +PEP++ +S ++P S
Sbjct: 171 HMIRDIQTLLSRMETLPYLQCRGGPQPQHSQP--PPQPPAV-TPEPVA-LSSQTSEPVES 226
Query: 123 QLP 125
+ P
Sbjct: 227 EAP 229
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 27.7 bits (60), Expect = 3.0
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 78 LELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFL 121
++L P GE + PG P PP V EPLS S P +
Sbjct: 754 VQLSPAPPGEEETSQWPG-PASPPRVPPREPLSPQGSRTPSPLV 796
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 27.7 bits (60), Expect = 3.0
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 78 LELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFL 121
++L P GE + PG P PP V EPLS S P +
Sbjct: 832 VQLSPAPPGEEETSQWPG-PASPPRVPPREPLSPQGSRTPSPLV 874
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 27.7 bits (60), Expect = 3.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 78 LELLPLRAGESSANSEPGGPTLPPFVKSPEPLSKAASLPTQP 119
L LPL AG +A GP P + +PLS+ S + P
Sbjct: 261 LAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGASTP 302
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 27.3 bits (59), Expect = 3.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 86 GESSANSEPGGPTLPPFVKSPE--PLSKAASLPTQPFLSQLPDVSRRTQS 133
G S +++ P PP SP P+S+A P QPF++ +P S + S
Sbjct: 1805 GGQSTSAQFPAPQAPP---SPGQLPISRAPPTPGQPFIAGVPPTSGQIPS 1851
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 27.3 bits (59), Expect = 3.9
Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 11/95 (11%)
Query: 36 AFNLPPRKDTVNKVPSWKQTAAFTRHQTFWHLDLALSSLQNRLELLPLRAGESSANSEPG 95
A + PPRK PS K A A S + +A +SA+
Sbjct: 444 AASAPPRKAPAVPAPSQKAPAV-----------PAPSQKAPAIPAPSRKASAASASPRKA 492
Query: 96 GPTLPPFVKSPEPLSKAASLPTQPFLSQLPDVSRR 130
P K+P P KA S+PT P + P ++
Sbjct: 493 SAVPAPPQKTPPPSQKAPSVPTIPQKAVSPTAPKK 527
>gi|148226214 t-complex 11 isoform 1 [Homo sapiens]
Length = 516
Score = 27.3 bits (59), Expect = 3.9
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 43 KDTVNKVPSWKQTAAFTRHQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPF 102
++ +NK PS H T W L+ L + P ++S +S GP+
Sbjct: 244 QELLNKQPS------LLNHTTKW-----LTQAAGDLTMSPPTCPDTSDSSSVAGPSPNEA 292
Query: 103 VKSPEPLSKAASLPTQPFLSQL 124
+PEPLS L Q FL+ L
Sbjct: 293 ANNPEPLSPTMVL-CQGFLNLL 313
>gi|8924256 t-complex 11 isoform 2 [Homo sapiens]
Length = 441
Score = 27.3 bits (59), Expect = 3.9
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 43 KDTVNKVPSWKQTAAFTRHQTFWHLDLALSSLQNRLELLPLRAGESSANSEPGGPTLPPF 102
++ +NK PS H T W L+ L + P ++S +S GP+
Sbjct: 169 QELLNKQPS------LLNHTTKW-----LTQAAGDLTMSPPTCPDTSDSSSVAGPSPNEA 217
Query: 103 VKSPEPLSKAASLPTQPFLSQL 124
+PEPLS L Q FL+ L
Sbjct: 218 ANNPEPLSPTMVL-CQGFLNLL 238
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 27.3 bits (59), Expect = 3.9
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 81 LPLRAGESSANSEPGGPT----LPPFVKSPEPLSKAASLPTQPFLSQLPDVS 128
LPL + A P PT PP +P+P AS P + L Q P +
Sbjct: 635 LPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSAT 686
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 27.3 bits (59), Expect = 3.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 100 PPFVKSPEPLSKAASLPTQPFLSQLPDVS 128
PP + P P S A+LP P L L +S
Sbjct: 394 PPHLSGPSPFSMNANLPPPPALKPLSSLS 422
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 27.3 bits (59), Expect = 3.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 100 PPFVKSPEPLSKAASLPTQPFLSQLPDVS 128
PP + P P S A+LP P L L +S
Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLS 976
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 27.3 bits (59), Expect = 3.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 100 PPFVKSPEPLSKAASLPTQPFLSQLPDVS 128
PP + P P S A+LP P L L +S
Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLS 976
>gi|224994173 roundabout 1 isoform d [Homo sapiens]
Length = 1551
Score = 26.9 bits (58), Expect = 5.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 87 ESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFLSQLPDVSRRTQSAS 135
E+ + P P PP +KSP SK + +LP + RT +S
Sbjct: 1374 ETYTDDLPPPPVPPPAIKSPTAQSKTQLEVRPVVVPKLPSMDARTDRSS 1422
>gi|224994171 roundabout 1 isoform c [Homo sapiens]
Length = 1606
Score = 26.9 bits (58), Expect = 5.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 87 ESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFLSQLPDVSRRTQSAS 135
E+ + P P PP +KSP SK + +LP + RT +S
Sbjct: 1429 ETYTDDLPPPPVPPPAIKSPTAQSKTQLEVRPVVVPKLPSMDARTDRSS 1477
>gi|19743806 roundabout 1 isoform b [Homo sapiens]
Length = 1612
Score = 26.9 bits (58), Expect = 5.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 87 ESSANSEPGGPTLPPFVKSPEPLSKAASLPTQPFLSQLPDVSRRTQSAS 135
E+ + P P PP +KSP SK + +LP + RT +S
Sbjct: 1435 ETYTDDLPPPPVPPPAIKSPTAQSKTQLEVRPVVVPKLPSMDARTDRSS 1483
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.128 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,689,483
Number of Sequences: 37866
Number of extensions: 253019
Number of successful extensions: 1469
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1406
Number of HSP's gapped (non-prelim): 100
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.