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Search of human proteins with 169173306
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
(281 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens] 575 e-164
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens] 383 e-106
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens] 383 e-106
gi|239749426 PREDICTED: hypothetical protein XP_002347042 [Homo ... 113 2e-25
gi|239743560 PREDICTED: hypothetical protein XP_002342893 [Homo ... 113 2e-25
gi|239754887 PREDICTED: hypothetical protein XP_002346152 [Homo ... 112 3e-25
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 54 2e-07
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 54 2e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 4e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 51 1e-06
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 49 4e-06
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 49 4e-06
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 49 5e-06
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 49 5e-06
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 49 6e-06
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 49 6e-06
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|91208420 bassoon protein [Homo sapiens] 47 2e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 46 3e-05
gi|13129104 coiled-coil domain containing 86 [Homo sapiens] 46 4e-05
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 45 5e-05
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 45 5e-05
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 45 5e-05
gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo ... 45 9e-05
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 44 1e-04
gi|239740948 PREDICTED: hypothetical protein LOC644246 [Homo sap... 44 1e-04
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239749768 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 575 bits (1483), Expect = e-164
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MRIAKHERVFGGRATDRFLRMFAKPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVK 60
MRIAKHERVFGGRATDRFLRMFAKPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVK
Sbjct: 1 MRIAKHERVFGGRATDRFLRMFAKPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVK 60
Query: 61 LGGGPSPASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRH 120
LGGGPSPASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRH
Sbjct: 61 LGGGPSPASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRH 120
Query: 121 RRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPN 180
RRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPN
Sbjct: 121 RRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPN 180
Query: 181 RHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSI 240
RHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSI
Sbjct: 181 RHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSI 240
Query: 241 ARSLPGSGRLQGLIFPSTGKNVQRHKSPPLPSEESLSQRSR 281
ARSLPGSGRLQGLIFPSTGKNVQRHKSPPLPSEESLSQRSR
Sbjct: 241 ARSLPGSGRLQGLIFPSTGKNVQRHKSPPLPSEESLSQRSR 281
>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 383 bits (983), Expect = e-106
Identities = 189/190 (99%), Positives = 189/190 (99%)
Query: 92 PRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAP 151
P RRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAP
Sbjct: 213 PGRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAP 272
Query: 152 KPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGA 211
KPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGA
Sbjct: 273 KPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGA 332
Query: 212 SSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPLP 271
SSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPLP
Sbjct: 333 SSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPLP 392
Query: 272 SEESLSQRSR 281
SEESLSQRSR
Sbjct: 393 SEESLSQRSR 402
Score = 31.2 bits (69), Expect = 1.1
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 32 SPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSP---HLEGAGCETRPWL 88
+P LPR P+ G R ++ +L G P P R P H + L
Sbjct: 265 APGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATL 324
Query: 89 GPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIR 139
P R + P L R A P R RR RAP +A + G R++
Sbjct: 325 RAPPGRGASSETMWP--TENLSSRRRAPPQR-RRTRAPSIARSLPGSGRLQ 372
>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 383 bits (983), Expect = e-106
Identities = 189/190 (99%), Positives = 189/190 (99%)
Query: 92 PRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAP 151
P RRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAP
Sbjct: 213 PGRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAP 272
Query: 152 KPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGA 211
KPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGA
Sbjct: 273 KPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGA 332
Query: 212 SSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPLP 271
SSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPLP
Sbjct: 333 SSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPLP 392
Query: 272 SEESLSQRSR 281
SEESLSQRSR
Sbjct: 393 SEESLSQRSR 402
Score = 31.2 bits (69), Expect = 1.1
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 32 SPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSP---HLEGAGCETRPWL 88
+P LPR P+ G R ++ +L G P P R P H + L
Sbjct: 265 APGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATL 324
Query: 89 GPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIR 139
P R + P L R A P R RR RAP +A + G R++
Sbjct: 325 RAPPGRGASSETMWP--TENLSSRRRAPPQR-RRTRAPSIARSLPGSGRLQ 372
>gi|239749426 PREDICTED: hypothetical protein XP_002347042 [Homo
sapiens]
Length = 517
Score = 113 bits (282), Expect = 2e-25
Identities = 63/99 (63%), Positives = 70/99 (70%), Gaps = 5/99 (5%)
Query: 93 RRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPK 152
RRRLALHL VP+GA++LGP GAQP HR QRA GLALVVTGVSRIR AHGAPGLPR+P+
Sbjct: 404 RRRLALHLHVPDGAQRLGPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQ 463
Query: 153 PSAGRGGK--EGGERGTEMLR---RLRGSPRPNRHPRSG 186
PSAGR G G+E LR G P +R P SG
Sbjct: 464 PSAGRAASPDPGEGVGSEALRCPEGCAGLPARSRRPCSG 502
>gi|239743560 PREDICTED: hypothetical protein XP_002342893 [Homo
sapiens]
Length = 517
Score = 113 bits (282), Expect = 2e-25
Identities = 63/99 (63%), Positives = 70/99 (70%), Gaps = 5/99 (5%)
Query: 93 RRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPK 152
RRRLALHL VP+GA++LGP GAQP HR QRA GLALVVTGVSRIR AHGAPGLPR+P+
Sbjct: 404 RRRLALHLHVPDGAQRLGPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQ 463
Query: 153 PSAGRGGK--EGGERGTEMLR---RLRGSPRPNRHPRSG 186
PSAGR G G+E LR G P +R P SG
Sbjct: 464 PSAGRAASPDPGEGVGSEALRCPEGCAGLPARSRRPCSG 502
>gi|239754887 PREDICTED: hypothetical protein XP_002346152 [Homo
sapiens]
Length = 517
Score = 112 bits (281), Expect = 3e-25
Identities = 63/99 (63%), Positives = 69/99 (69%), Gaps = 5/99 (5%)
Query: 93 RRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPK 152
RRRLALHL VP+GA++LGP GAQP HR QRA GLALVVTGVSRIR AHGAPGLPR+P+
Sbjct: 404 RRRLALHLHVPDGAQRLGPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQ 463
Query: 153 PSAGRGGK--EGGERGTEMLR---RLRGSPRPNRHPRSG 186
PSAGR G G E LR G P +R P SG
Sbjct: 464 PSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRRPCSG 502
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 53.9 bits (128), Expect = 2e-07
Identities = 65/257 (25%), Positives = 90/257 (35%), Gaps = 46/257 (17%)
Query: 19 LRMFAKPGVSPRRSPAL---PRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSP 75
+R P SP SP+ +P P P + +P R + V+L P
Sbjct: 715 MRQLQAPAGSPAPSPSPGGDDKPQVP----PRVPIPPRPTRPHVQLSPAPPGEE------ 764
Query: 76 HLEGAGCETRPWLGPRPRRRLALHLQV-PEGARQLGPRT--GAQPSRHRRQRAPGLALVV 132
ET W GP R+ + P+G+R P G+ P R +PG +
Sbjct: 765 -------ETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPLPPRLSSSPGKTMPT 817
Query: 133 TGVSRIRPAHGAPGLPRAPKPSAG-------RGGKEGG--------------ERGTEMLR 171
T P + P + +AP P AG R GK+ ER LR
Sbjct: 818 TQSFASDPKYATPQVIQAPGPRAGPCILPIVRDGKKVSSTHYYLLPERPSYLERYQRFLR 877
Query: 172 RLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQ 231
+ P P +P + AA AT+R P + + T N + R PP
Sbjct: 878 EAQSPEEPTPLPVPLLLPPPSTPAPAAPTATVRPMPQAALDPKANFSTNNSNPGARPPPP 937
Query: 232 RRRTRAPSIARSLPGSG 248
R R P R PG G
Sbjct: 938 RATARLPQ--RGCPGDG 952
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sapiens]
Length = 1086
Score = 53.9 bits (128), Expect = 2e-07
Identities = 65/257 (25%), Positives = 90/257 (35%), Gaps = 46/257 (17%)
Query: 19 LRMFAKPGVSPRRSPAL---PRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSP 75
+R P SP SP+ +P P P + +P R + V+L P
Sbjct: 793 MRQLQAPAGSPAPSPSPGGDDKPQVP----PRVPIPPRPTRPHVQLSPAPPGEE------ 842
Query: 76 HLEGAGCETRPWLGPRPRRRLALHLQV-PEGARQLGPRT--GAQPSRHRRQRAPGLALVV 132
ET W GP R+ + P+G+R P G+ P R +PG +
Sbjct: 843 -------ETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPLPPRLSSSPGKTMPT 895
Query: 133 TGVSRIRPAHGAPGLPRAPKPSAG-------RGGKEGG--------------ERGTEMLR 171
T P + P + +AP P AG R GK+ ER LR
Sbjct: 896 TQSFASDPKYATPQVIQAPGPRAGPCILPIVRDGKKVSSTHYYLLPERPSYLERYQRFLR 955
Query: 172 RLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQ 231
+ P P +P + AA AT+R P + + T N + R PP
Sbjct: 956 EAQSPEEPTPLPVPLLLPPPSTPAPAAPTATVRPMPQAALDPKANFSTNNSNPGARPPPP 1015
Query: 232 RRRTRAPSIARSLPGSG 248
R R P R PG G
Sbjct: 1016 RATARLPQ--RGCPGDG 1030
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 52.4 bits (124), Expect = 4e-07
Identities = 75/276 (27%), Positives = 111/276 (40%), Gaps = 55/276 (19%)
Query: 1 MRIAKHERVFGGRATDRFLRMFAKPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVK 60
+RI+ E V G+AT+ R G RR + P PG P+P + RR G +
Sbjct: 134 LRISAEETVARGKATEAPKRSALSAGA--RRDTSGPTPGTPSPA-----MARRSRAAGTE 186
Query: 61 LGGGPSPASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQ----VPEGARQLGPRTGAQ 116
+G P PA ARP P EG PR+ ++ + P A + P G
Sbjct: 187 VGL-PRPAPSARPRPPTEG------------PRKSVSSASEHSTTEPSPAARRRPSAGGG 233
Query: 117 PSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAP-KPSAGRGGKEGGERGTEMLRRLRG 175
R + A ++ +R P+ A G PRAP PS + +G + LR +
Sbjct: 234 LQRPASRSLSSSATPLSSPARSGPS--ARGTPRAPAHPSQPK------PKGLQALRPPQV 285
Query: 176 SPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRA--PPQRR 233
+P PR PA G S+ + L P G + + P +N ++ A PP
Sbjct: 286 TP-----PRKDAAPALGPLSS----SPLATPSPSGTKARPVPPPDNAATPLPATLPP--- 333
Query: 234 RTRAPSIARSLPGSGRLQGLIFPSTGKNVQRHKSPP 269
+P +A LP + PS ++Q SPP
Sbjct: 334 ---SPPLATPLPLAPP-----SPSAPPSLQTLPSPP 361
Score = 40.4 bits (93), Expect = 0.002
Identities = 56/205 (27%), Positives = 67/205 (32%), Gaps = 46/205 (22%)
Query: 32 SPALPRPGFPAPGFPALRLPRRRA-----------QLGVKLGGGPSPASGARPSPHLEGA 80
+P L P P P P L+ PRR +L + L GP P PS L G
Sbjct: 837 APLLQVPPSP-PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 895
Query: 81 GCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQ-----PSRHRRQRAPGLALVVTGV 135
L + PEG P A+ P+ R AP LA
Sbjct: 896 DLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAF----- 950
Query: 136 SRIRPAHGAPGLPRAPKPSAGRGGKEG-----GERGTEMLRRLRGSPRPNRHPRSGPVPA 190
GAPG P P+ G G +G G E G+ P GP P
Sbjct: 951 ------RGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDP------GPSPG 998
Query: 191 HGVASAAAGPATLRAPPGRGASSET 215
AAAG G GASS +
Sbjct: 999 TSGGKAAAG-------AGAGASSRS 1016
Score = 37.7 bits (86), Expect = 0.011
Identities = 48/165 (29%), Positives = 64/165 (38%), Gaps = 30/165 (18%)
Query: 124 RAPGLALVVTGVSRIRPAHGAPGLPRAPKPSA-------GRGGKEGGERGTEMLRRLRGS 176
RAPGL RP PG PR P P G G G + E + G+
Sbjct: 20 RAPGLLTP-------RP----PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGA 68
Query: 177 PRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTR 236
P PR+GP + G +S PA+ GRG E P +N S + P R
Sbjct: 69 TIPESAPRAGPTRSAGTSS--RNPASRPPASGRG---ERAPPAKNTSPGPVSSPGR---- 119
Query: 237 APSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPLPSEESLSQRSR 281
+ + PG +GL S + V R K+ P +LS +R
Sbjct: 120 --ASGTTRPGPLGQKGLRI-SAEETVARGKATEAPKRSALSAGAR 161
Score = 36.2 bits (82), Expect = 0.033
Identities = 58/199 (29%), Positives = 69/199 (34%), Gaps = 39/199 (19%)
Query: 105 GARQ--LGPRTGA-QPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRA----------- 150
GAR+ GP G P+ RR RA G T V RPA A P
Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAG-----TEVGLPRPAPSARPRPPTEGPRKSVSSAS 213
Query: 151 ------PKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHP-RSGP-------VPAHGVASA 196
P P+A R GG R L S P P RSGP PAH
Sbjct: 214 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK 273
Query: 197 AAGPATLRAP---PGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSGRLQGL 253
G LR P P R ++ + P LSS A P T+A + + L
Sbjct: 274 PKGLQALRPPQVTPPRKDAAPALGP---LSSSPLATPSPSGTKARPVPPPDNAATPLPAT 330
Query: 254 IFPSTGKNVQRHKSPPLPS 272
+ PS +PP PS
Sbjct: 331 LPPSPPLATPLPLAPPSPS 349
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 51.2 bits (121), Expect = 1e-06
Identities = 75/284 (26%), Positives = 109/284 (38%), Gaps = 45/284 (15%)
Query: 1 MRIAKHERVFGGRATDRFLRMFAKPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVK 60
+RI+ E V G+AT+ R G RR + P PG P+P + RR G +
Sbjct: 134 LRISAEETVARGKATEAPKRSALSAGA--RRDTSGPTPGTPSPA-----MARRSRAAGTE 186
Query: 61 LGGGPSPASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQ----VPEGARQLGPRTGAQ 116
+G P PA ARP P EG PR+ ++ + P A + P G
Sbjct: 187 VGL-PRPAPSARPRPPTEG------------PRKSVSSASEHSTTEPSPAARRRPSAGGG 233
Query: 117 PSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAP-KPSAGRGGKEGGERGTEMLRRLRG 175
R + A ++ +R P+ A G PRAP PS + +G + LR +
Sbjct: 234 LQRPASRSLSSSATPLSSPARSGPS--ARGTPRAPAHPSQPK------PKGLQALRPPQV 285
Query: 176 S-PRPNRHPRSGPV-------PAHGVASAAAGPATLRAPP-GRGASSETMWPTENLSSRR 226
+ PR + P GP+ P+ A + P TL A P + + P
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSP 345
Query: 227 RAPPQRRRTRAPSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPL 270
APP + +P + P S L P+ SPPL
Sbjct: 346 SAPPSLQTLPSPP---ATPPSQATTSLGSPTLQATHSFLPSPPL 386
Score = 40.4 bits (93), Expect = 0.002
Identities = 56/205 (27%), Positives = 67/205 (32%), Gaps = 46/205 (22%)
Query: 32 SPALPRPGFPAPGFPALRLPRRRA-----------QLGVKLGGGPSPASGARPSPHLEGA 80
+P L P P P P L+ PRR +L + L GP P PS L G
Sbjct: 568 APLLQVPPSP-PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 626
Query: 81 GCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQ-----PSRHRRQRAPGLALVVTGV 135
L + PEG P A+ P+ R AP LA
Sbjct: 627 DLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAF----- 681
Query: 136 SRIRPAHGAPGLPRAPKPSAGRGGKEG-----GERGTEMLRRLRGSPRPNRHPRSGPVPA 190
GAPG P P+ G G +G G E G+ P GP P
Sbjct: 682 ------RGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDP------GPSPG 729
Query: 191 HGVASAAAGPATLRAPPGRGASSET 215
AAAG G GASS +
Sbjct: 730 TSGGKAAAG-------AGAGASSRS 747
Score = 37.7 bits (86), Expect = 0.011
Identities = 48/165 (29%), Positives = 64/165 (38%), Gaps = 30/165 (18%)
Query: 124 RAPGLALVVTGVSRIRPAHGAPGLPRAPKPSA-------GRGGKEGGERGTEMLRRLRGS 176
RAPGL RP PG PR P P G G G + E + G+
Sbjct: 20 RAPGLLTP-------RP----PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGA 68
Query: 177 PRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTR 236
P PR+GP + G +S PA+ GRG E P +N S + P R
Sbjct: 69 TIPESAPRAGPTRSAGTSS--RNPASRPPASGRG---ERAPPAKNTSPGPVSSPGR---- 119
Query: 237 APSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPLPSEESLSQRSR 281
+ + PG +GL S + V R K+ P +LS +R
Sbjct: 120 --ASGTTRPGPLGQKGLRI-SAEETVARGKATEAPKRSALSAGAR 161
Score = 37.0 bits (84), Expect = 0.019
Identities = 59/215 (27%), Positives = 76/215 (35%), Gaps = 47/215 (21%)
Query: 105 GARQ--LGPRTGA-QPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRA----------- 150
GAR+ GP G P+ RR RA G T V RPA A P
Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAG-----TEVGLPRPAPSARPRPPTEGPRKSVSSAS 213
Query: 151 ------PKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHP-RSGP-------VPAHGVASA 196
P P+A R GG R L S P P RSGP PAH
Sbjct: 214 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK 273
Query: 197 AAGPATLRAP---PGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSGRLQGL 253
G LR P P R ++ + P + +P +++AP + P S L
Sbjct: 274 PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQ 333
Query: 254 I---------FPSTGKNVQRHKSPPL--PSEESLS 277
+ PS ++Q SPP PS+ + S
Sbjct: 334 LATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTS 368
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 49.3 bits (116), Expect = 4e-06
Identities = 61/217 (28%), Positives = 82/217 (37%), Gaps = 28/217 (12%)
Query: 28 SPRRSPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSPHLEGAGCETRPW 87
S + A FP PGF + P RA + +L P+ A P L GA T
Sbjct: 39 SASSAAAAASSSFPPPGF--IHPPSSRAAVHSRLRAAPAAAPRLLPRV-LAGAPARTGAL 95
Query: 88 LGPRPRRRLAL----HLQVPEGAR---QLGPRTGAQP-SRHRRQRAPGLALVVTGVSRIR 139
G R R A P G R + GP QP SRH R P V + +R
Sbjct: 96 AGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPR---AVPEATPLR 152
Query: 140 PAHGA-------PGLPRAPKPSAGRG-GKEGGERGTEMLRRLRGSPRPNRHPRSGPV--P 189
P G PG +P P+ R G+ G RG R +PRP HPR P
Sbjct: 153 PPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPR----APRPGDHPRRSPALRE 208
Query: 190 AHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRR 226
++ + G + G+G + + P ++RR
Sbjct: 209 TPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRR 245
Score = 34.7 bits (78), Expect = 0.096
Identities = 48/174 (27%), Positives = 63/174 (36%), Gaps = 30/174 (17%)
Query: 24 KPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSPHLEGAGCE 83
+PG PRRSPAL +P P R +R A G G +P P P C
Sbjct: 195 RPGDHPRRSPALRETPSLSPPSPGRRNGKRAA------GKGTTPQPQPPPPP------CA 242
Query: 84 TRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAH- 142
T R +AL + +R R Q GL L+++ +PA
Sbjct: 243 T------RREEDMALRTRDRTSSRGTVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASL 296
Query: 143 --------GAPGLPRAPKPSAGRGGKE--GGERGTEM-LRRLRGSPRPNRHPRS 185
G GLP P + +G + G E G +M L R RP RS
Sbjct: 297 RRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS 350
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 49.3 bits (116), Expect = 4e-06
Identities = 72/255 (28%), Positives = 91/255 (35%), Gaps = 43/255 (16%)
Query: 35 LPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSPHLE--GAGCETRPWLGPRP 92
LP G APG P R G G P+ S +R P E G G E P G +
Sbjct: 167 LPTAG--APGSLHSHAPSARTPGGGHSSGAPAKGSSSRDGPAKERAGRGGEPPPLFGKKD 224
Query: 93 RRRLALHLQVPEGARQLGPRTGAQ------PSRHRRQRAPGLALVVTGVSRIRPA----- 141
R P G L A+ P R + +P LA T + ++P+
Sbjct: 225 PRARGEEASGPRGVVDLTQEARAEGRQDRGPPRLAERLSPFLAESKTKNAALQPSVLTMC 284
Query: 142 ---HGAPGLPRAPKPSAGRGGKEGGER---GTEMLRR---LRGSPRPNRHPRSGPV---- 188
G GLP A AGRGG + R G +LRR L PRP P P
Sbjct: 285 NGGAGDVGLP-ALVAEAGRGGAKEAARQDEGARLLRRTETLLPGPRPCPSPLPPPPAPPK 343
Query: 189 -PAHGVASAAAGPATLRAPPGR-------------GASSETMWPTENLSSRRRAPPQRRR 234
P A+ AG T+ GR A E P + S R A + R
Sbjct: 344 GPPAPPAATPAGVYTVFREQGREHRVVAPTFVPSVEAFDERPGPIQIASQARDARARERE 403
Query: 235 TRAPSIARSLPGSGR 249
P + ++ PGS R
Sbjct: 404 AGRPGVLQAPPGSPR 418
Score = 34.3 bits (77), Expect = 0.13
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 24 KPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSPHLEGAGCE 83
K +P+ PA P+P P F + P A+L P+PA+ P+P +
Sbjct: 2382 KRAKAPKARPAPPQPSPAPPAFTSCPAPEPFAEL-------PAPATSLAPAPLI------ 2428
Query: 84 TRPWLGPRPRRRLALHLQVPEGARQLG 110
T P P+P++ A +G R+ G
Sbjct: 2429 TMPATRPKPKKARAAEESGAKGPRRPG 2455
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 48.9 bits (115), Expect = 5e-06
Identities = 60/225 (26%), Positives = 83/225 (36%), Gaps = 48/225 (21%)
Query: 31 RSPALPRPGFPAPGFPALRLPRRRAQLGVKLGG---GPSPASGARPSPHLEGAGCETRPW 87
R PA+ G+ P P R RR L V G P+PA AR P
Sbjct: 24 RGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARP------------ 71
Query: 88 LGPRPRRRLALHLQVPEGA--RQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRP--AHG 143
PR R+ A+ + G R G +TG + +G R +P
Sbjct: 72 --PRENRKRAVPARAARGPPKRPAGGQTGGVEA-------------ASGEERSQPRRPRR 116
Query: 144 APGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATL 203
P PR P+P+ GR ++ +L R +G R R G +HG + G
Sbjct: 117 PPPAPRRPRPAPGR--RKSLYEAAPLLTREKGGRSGRRGDRGGSGWSHGHTARVGG---- 170
Query: 204 RAPPGRGASSETMWPTEN---LSSRRRAPPQRRRTRAPSIARSLP 245
G ++ T +P + S R P RR R PS+ RS P
Sbjct: 171 ---TGDSSAGLTTFPGSSRGGFSGREEEP--RRERRQPSLQRSTP 210
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 48.9 bits (115), Expect = 5e-06
Identities = 60/225 (26%), Positives = 83/225 (36%), Gaps = 48/225 (21%)
Query: 31 RSPALPRPGFPAPGFPALRLPRRRAQLGVKLGG---GPSPASGARPSPHLEGAGCETRPW 87
R PA+ G+ P P R RR L V G P+PA AR P
Sbjct: 24 RGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARP------------ 71
Query: 88 LGPRPRRRLALHLQVPEGA--RQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRP--AHG 143
PR R+ A+ + G R G +TG + +G R +P
Sbjct: 72 --PRENRKRAVPARAARGPPKRPAGGQTGGVEA-------------ASGEERSQPRRPRR 116
Query: 144 APGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATL 203
P PR P+P+ GR ++ +L R +G R R G +HG + G
Sbjct: 117 PPPAPRRPRPAPGR--RKSLYEAAPLLTREKGGRSGRRGDRGGSGWSHGHTARVGG---- 170
Query: 204 RAPPGRGASSETMWPTEN---LSSRRRAPPQRRRTRAPSIARSLP 245
G ++ T +P + S R P RR R PS+ RS P
Sbjct: 171 ---TGDSSAGLTTFPGSSRGGFSGREEEP--RRERRQPSLQRSTP 210
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 48.5 bits (114), Expect = 6e-06
Identities = 70/271 (25%), Positives = 89/271 (32%), Gaps = 71/271 (26%)
Query: 28 SPRRSPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSPHLEGAGCETRPW 87
SP + P PG P P P G LGGG R SP + RP
Sbjct: 197 SPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGG-----SIRQSPLSSSSPFSNRPP 251
Query: 88 LGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGL 147
L P P R L P P G +PS HR P P + P +
Sbjct: 252 LPPTPSRALDDKPPPPP------PPVGNRPSIHREAVPPP-----------PPQNNKPPV 294
Query: 148 PRAPKPSA---------------------GRGGKEGGERGTEMLRRLRGSPRPNRHP-RS 185
P P+PSA G + R + L S P P RS
Sbjct: 295 PSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Query: 186 GPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIARSLP 245
GP+P + P +R PPGR PP +R S +R+LP
Sbjct: 355 GPLPP---PPSERPPPPVRDPPGRSGP---------------LPPPPPVSRNGSTSRALP 396
Query: 246 GSGRL---QGLIFPSTGKNVQRHKSPPLPSE 273
+ +L G+ P +G PPLP +
Sbjct: 397 ATPQLPSRSGVDSPRSGPR------PPLPPD 421
Score = 30.0 bits (66), Expect = 2.4
Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 26/152 (17%)
Query: 146 GLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGP----VPAHGVASAAAGPA 201
G+P+ + +A R GG R + R + P SGP VP+ G S P
Sbjct: 107 GMPKL-RSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQ 165
Query: 202 TLRAPPGR---GASSE--------TMWPTENLSSRRRAPPQRRRTRAPSIARSLP----- 245
R PP R G+ + T P ++ R +PP R PS + P
Sbjct: 166 RNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGN 225
Query: 246 -----GSGRLQGLIFPSTGKNVQRHKSPPLPS 272
G G ++ S+ R PP PS
Sbjct: 226 RGTALGGGSIRQSPLSSSSPFSNRPPLPPTPS 257
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 48.5 bits (114), Expect = 6e-06
Identities = 70/271 (25%), Positives = 89/271 (32%), Gaps = 71/271 (26%)
Query: 28 SPRRSPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSPHLEGAGCETRPW 87
SP + P PG P P P G LGGG R SP + RP
Sbjct: 197 SPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGG-----SIRQSPLSSSSPFSNRPP 251
Query: 88 LGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGL 147
L P P R L P P G +PS HR P P + P +
Sbjct: 252 LPPTPSRALDDKPPPPP------PPVGNRPSIHREAVPPP-----------PPQNNKPPV 294
Query: 148 PRAPKPSA---------------------GRGGKEGGERGTEMLRRLRGSPRPNRHP-RS 185
P P+PSA G + R + L S P P RS
Sbjct: 295 PSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Query: 186 GPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIARSLP 245
GP+P + P +R PPGR PP +R S +R+LP
Sbjct: 355 GPLPP---PPSERPPPPVRDPPGRSGP---------------LPPPPPVSRNGSTSRALP 396
Query: 246 GSGRL---QGLIFPSTGKNVQRHKSPPLPSE 273
+ +L G+ P +G PPLP +
Sbjct: 397 ATPQLPSRSGVDSPRSGPR------PPLPPD 421
Score = 30.0 bits (66), Expect = 2.4
Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 26/152 (17%)
Query: 146 GLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGP----VPAHGVASAAAGPA 201
G+P+ + +A R GG R + R + P SGP VP+ G S P
Sbjct: 107 GMPKL-RSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQ 165
Query: 202 TLRAPPGR---GASSE--------TMWPTENLSSRRRAPPQRRRTRAPSIARSLP----- 245
R PP R G+ + T P ++ R +PP R PS + P
Sbjct: 166 RNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGN 225
Query: 246 -----GSGRLQGLIFPSTGKNVQRHKSPPLPS 272
G G ++ S+ R PP PS
Sbjct: 226 RGTALGGGSIRQSPLSSSSPFSNRPPLPPTPS 257
>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 47.0 bits (110), Expect = 2e-05
Identities = 63/208 (30%), Positives = 76/208 (36%), Gaps = 43/208 (20%)
Query: 25 PGVSPRRSPA------LPRPG-FPAPGFPALRLPRR-RAQLGVKLG--GGPSPASGARPS 74
PG SPRR+P PRPG APG PRR R LG SP S
Sbjct: 43 PGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLG 102
Query: 75 PHLEGAGCETRPW--LGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVV 132
HL G P L P + L++P Q P ++P AP
Sbjct: 103 SHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRP-------APP----- 150
Query: 133 TGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHG 192
RPAH ++P RG GG R T R +G P PR+ P
Sbjct: 151 ------RPAH------QSPAEEGPRGAAGGGPR-TPPAGRTQGQSGPRESPRASP----- 192
Query: 193 VASAAAGPATLRAPPGRGASSETMWPTE 220
SAA A++R P GA+ TE
Sbjct: 193 -GSAAPAMASVRGPARDGATRSEPHATE 219
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 47.0 bits (110), Expect = 2e-05
Identities = 59/225 (26%), Positives = 83/225 (36%), Gaps = 37/225 (16%)
Query: 23 AKPGVSPRRSPALPRPGFPAPGFPA---LRLPRRRAQL----------GVKLGGGPSP-A 68
A+P P +PA+P+ G PG+P+ P R + + GP+
Sbjct: 3679 ARPHSQPSSAPAMPKKG--QPGYPSSAEYSQPSRASSAYHHASDSKKGSRQAHSGPAALQ 3736
Query: 69 SGARP--SPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRT-------GAQPSR 119
S A P P L+G P P R Q+P GA P+T G QP +
Sbjct: 3737 SKAEPQAQPQLQGRQAAPGPQQSQSPSSR-----QIPSGAASRQPQTQQQQQGLGLQPPQ 3791
Query: 120 HRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRG---S 176
+A PA P P PS G + G E +G +
Sbjct: 3792 QALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTNGSKGTAKA 3851
Query: 177 PRPNRHPRSGPVPAHGVASAAAGP---ATLRAPPGR-GASSETMW 217
P+ R P++ P P G A AG T AP G+ GA E+++
Sbjct: 3852 PQQGRAPQAQPAPGPGPAGVKAGARPGGTPGAPAGQPGADGESVF 3896
Score = 38.1 bits (87), Expect = 0.009
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 146 GLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSG-PVPAHGVASAAA-----G 199
G P P G G G G G+ +P P G +PA G A + A G
Sbjct: 10 GAGDGPLPPGGAGPGPGPGPGP-------GAGKPPSAPAGGGQLPAAGAARSTAVPPVPG 62
Query: 200 PATLRAP-PGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSGRLQG 252
P P PG G++S + P E L ++R A P ++ A + P R QG
Sbjct: 63 PGPGPGPGPGPGSTSRRLDPKEPLGNQRAASPTPKQASATTPGHESPRETRAQG 116
Score = 30.4 bits (67), Expect = 1.8
Identities = 40/165 (24%), Positives = 59/165 (35%), Gaps = 43/165 (26%)
Query: 70 GARPSPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLA 129
G P+PHL + + WL + + AL + + PR+ +Q H +P L+
Sbjct: 202 GFNPNPHLT----QVKEWLCLNCQMQRALGMDMTTA-----PRSKSQQQLH----SPALS 248
Query: 130 LVVTGVSRIRPAHGAPGLPRAPKP----SAGRGGKEGGERGTEMLRRL------------ 173
PAH +P KP S G GG + G R E R
Sbjct: 249 ----------PAH-SPAKQPLGKPDQERSRGPGGPQPGSRQAETARATSVPGPAQAAAPP 297
Query: 174 ---RGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSET 215
R SP+P + + A A + P G GA+ +T
Sbjct: 298 EVGRVSPQPPQPTKPSTAEPRPPAGEAPAKSATAVPAGLGATEQT 342
Score = 30.0 bits (66), Expect = 2.4
Identities = 47/181 (25%), Positives = 56/181 (30%), Gaps = 48/181 (26%)
Query: 62 GGGPSPASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHR 121
G GP P GA P P GP P GP G PS
Sbjct: 12 GDGPLPPGGAGPGP-------------GPGP-----------------GPGAGKPPS--- 38
Query: 122 RQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLR-GSPRPN 180
A G L G +R PG P P G G E L R SP P
Sbjct: 39 -APAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPGPGSTSRRLDPKEPLGNQRAASPTPK 97
Query: 181 RHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSI 240
+ S P H P RA G ++ T + SR +R R+PS+
Sbjct: 98 Q--ASATTPGH------ESPRETRAQGPAGQEADGPRRTLQVDSR-----TQRSGRSPSV 144
Query: 241 A 241
+
Sbjct: 145 S 145
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 46.2 bits (108), Expect = 3e-05
Identities = 65/226 (28%), Positives = 76/226 (33%), Gaps = 30/226 (13%)
Query: 41 PAPGFPALRLPRRRAQLGVKLGGGPSPASGARPSPHLEGAGCETRPWLGPRPRRRLAL-- 98
PAP PA P A L + G GP P G P P G G P AL
Sbjct: 152 PAPAGPAK--PAGPAALAARAGPGPGPGPGPGPGP---GPGKPAGPGAAQTLNGSAALLN 206
Query: 99 --HLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGV--SRIRPAHGAPGLPRAPKPS 154
H P A L A + APG + + PA AP P AP P+
Sbjct: 207 SHHAAAP--AVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPA 264
Query: 155 AGRGGKEGGERGTEMLRRLRGSPR--PNRHPRSGPV----------PAHGVASAAAGPAT 202
A L R G P P P P A A AA GPA
Sbjct: 265 APAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAG 324
Query: 203 LRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSG 248
+ PG GA++ P S P+R AP A++L SG
Sbjct: 325 VSGQPGPGAAAAAPAPGVKAES-----PKRVVQAAPPAAQTLAASG 365
Score = 37.7 bits (86), Expect = 0.011
Identities = 49/178 (27%), Positives = 56/178 (31%), Gaps = 33/178 (18%)
Query: 42 APGFPALRLPRRRAQLGVKLGGGPSPASGARPSPHLEGA---------GCETRPWLG--- 89
AP P +R A + G P+ A+GA P+ EGA RP G
Sbjct: 44 APRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQ 103
Query: 90 ----PRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAP 145
P PRR L P A+ P G+ S P A V G PA P
Sbjct: 104 RPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGS---CAPVPAAAAVAAGP---EPAPAGP 157
Query: 146 GLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATL 203
P P A R G G P P P G G A G A L
Sbjct: 158 AKPAGPAALAARAGPGPGP-----------GPGPGPGPGPGKPAGPGAAQTLNGSAAL 204
Score = 32.3 bits (72), Expect = 0.48
Identities = 36/116 (31%), Positives = 41/116 (35%), Gaps = 15/116 (12%)
Query: 103 PEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEG 162
P GA GP A+ APG A R RP G P P P P
Sbjct: 67 PAGAAGAGPAAPAEG-------APGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGP 119
Query: 163 GERGTEMLRRLRGS-----PRPNRHP-RSGPVPAHGVASAAAGPATL--RAPPGRG 210
++ GS P P +GP PA + AGPA L RA PG G
Sbjct: 120 APPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPG 175
>gi|13129104 coiled-coil domain containing 86 [Homo sapiens]
Length = 360
Score = 45.8 bits (107), Expect = 4e-05
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 34/207 (16%)
Query: 61 LGGGPSPASGARPSPHLE-GAGCET---RPWLGPR-PRRRLALHLQVPEGARQLGP---R 112
LG P + SP L+ GAG E+ +P G P+R+ LHL+ P+ + P R
Sbjct: 56 LGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR 115
Query: 113 TGAQPSRHRRQRAPGLALVVTGVSRIR-------PAHGAPGLPRAPKPSAGRG--GKEGG 163
+PS + + ++ + +++ + P H P +P +P+P G+ G E
Sbjct: 116 CQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPS 175
Query: 164 ERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLS 223
+ E+ R GSPR +H S P PA + G A +G+SS+
Sbjct: 176 QPLLELTPRAPGSPR-GQHEPSKPPPAGETVTGGFG-----AKKRKGSSSQA-------- 221
Query: 224 SRRRAPPQRRRTRAPSIARSLPGSGRL 250
A + + P I + P SGR+
Sbjct: 222 ---PASKKLNKEELPVIPKGKPKSGRV 245
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 45.4 bits (106), Expect = 5e-05
Identities = 70/233 (30%), Positives = 81/233 (34%), Gaps = 51/233 (21%)
Query: 24 KPGVSPRRSPALPRPGFPAP----GFPALRLPRRRAQLGVKLGGG------PSPASGARP 73
+PG +P SP LP P P P P A G GG + +S P
Sbjct: 91 QPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVP 150
Query: 74 SPHL----EGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLA 129
P L GA C LGP P R A + G R RT P R RR P
Sbjct: 151 RPRLPSQRRGASC----GLGPGPESRAA---RQGLGGRSARARTRRGPHRTRR---PEPG 200
Query: 130 LVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVP 189
TG + P G G RA AG G G P RH R G
Sbjct: 201 PHHTGARQAGPLPGTRGRTRA----AGTGSAARG---------------PARHLRGG--- 238
Query: 190 AHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIAR 242
VA+AAA +PPGR S P +L+ P R +PS R
Sbjct: 239 --SVAAAAAARCLGLSPPGR---SRLFSPRSSLARPPLRFPPARPALSPSARR 286
Score = 35.0 bits (79), Expect = 0.074
Identities = 56/245 (22%), Positives = 83/245 (33%), Gaps = 44/245 (17%)
Query: 33 PALPRPGFPAPGFPALR----LPRRRAQLGVKLGG------GPSPASG-ARPSPHLEGAG 81
P+ P + P P + LP+ + + + G GPSPA P P G
Sbjct: 33 PSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQP-----G 87
Query: 82 CETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPA 141
+P P RL L A PR G+ P+ G + G+++ A
Sbjct: 88 PPHQPGFNPASSPRLPLPADSEPDAYTSAPR-GSGPTYCA---GAGNSRAGGGLTKYNSA 143
Query: 142 HGAPGLPRAPKPS----------------------AGRGGKEGGERGTEMLRRLRGSPRP 179
H + +PR PS GR + RG RR P
Sbjct: 144 HSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHH 203
Query: 180 NRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAP- 238
++GP+P + AAG + P R ++ +PP R R +P
Sbjct: 204 TGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPR 263
Query: 239 -SIAR 242
S+AR
Sbjct: 264 SSLAR 268
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 45.4 bits (106), Expect = 5e-05
Identities = 70/233 (30%), Positives = 81/233 (34%), Gaps = 51/233 (21%)
Query: 24 KPGVSPRRSPALPRPGFPAP----GFPALRLPRRRAQLGVKLGGG------PSPASGARP 73
+PG +P SP LP P P P P A G GG + +S P
Sbjct: 91 QPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVP 150
Query: 74 SPHL----EGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLA 129
P L GA C LGP P R A + G R RT P R RR P
Sbjct: 151 RPRLPSQRRGASC----GLGPGPESRAA---RQGLGGRSARARTRRGPHRTRR---PEPG 200
Query: 130 LVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVP 189
TG + P G G RA AG G G P RH R G
Sbjct: 201 PHHTGARQAGPLPGTRGRTRA----AGTGSAARG---------------PARHLRGG--- 238
Query: 190 AHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIAR 242
VA+AAA +PPGR S P +L+ P R +PS R
Sbjct: 239 --SVAAAAAARCLGLSPPGR---SRLFSPRSSLARPPLRFPPARPALSPSARR 286
Score = 35.0 bits (79), Expect = 0.074
Identities = 56/245 (22%), Positives = 83/245 (33%), Gaps = 44/245 (17%)
Query: 33 PALPRPGFPAPGFPALR----LPRRRAQLGVKLGG------GPSPASG-ARPSPHLEGAG 81
P+ P + P P + LP+ + + + G GPSPA P P G
Sbjct: 33 PSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQP-----G 87
Query: 82 CETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPA 141
+P P RL L A PR G+ P+ G + G+++ A
Sbjct: 88 PPHQPGFNPASSPRLPLPADSEPDAYTSAPR-GSGPTYCA---GAGNSRAGGGLTKYNSA 143
Query: 142 HGAPGLPRAPKPS----------------------AGRGGKEGGERGTEMLRRLRGSPRP 179
H + +PR PS GR + RG RR P
Sbjct: 144 HSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHH 203
Query: 180 NRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAP- 238
++GP+P + AAG + P R ++ +PP R R +P
Sbjct: 204 TGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPR 263
Query: 239 -SIAR 242
S+AR
Sbjct: 264 SSLAR 268
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 45.4 bits (106), Expect = 5e-05
Identities = 70/233 (30%), Positives = 81/233 (34%), Gaps = 51/233 (21%)
Query: 24 KPGVSPRRSPALPRPGFPAP----GFPALRLPRRRAQLGVKLGGG------PSPASGARP 73
+PG +P SP LP P P P P A G GG + +S P
Sbjct: 91 QPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVP 150
Query: 74 SPHL----EGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLA 129
P L GA C LGP P R A + G R RT P R RR P
Sbjct: 151 RPRLPSQRRGASC----GLGPGPESRAA---RQGLGGRSARARTRRGPHRTRR---PEPG 200
Query: 130 LVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVP 189
TG + P G G RA AG G G P RH R G
Sbjct: 201 PHHTGARQAGPLPGTRGRTRA----AGTGSAARG---------------PARHLRGG--- 238
Query: 190 AHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIAR 242
VA+AAA +PPGR S P +L+ P R +PS R
Sbjct: 239 --SVAAAAAARCLGLSPPGR---SRLFSPRSSLARPPLRFPPARPALSPSARR 286
Score = 35.0 bits (79), Expect = 0.074
Identities = 56/245 (22%), Positives = 83/245 (33%), Gaps = 44/245 (17%)
Query: 33 PALPRPGFPAPGFPALR----LPRRRAQLGVKLGG------GPSPASG-ARPSPHLEGAG 81
P+ P + P P + LP+ + + + G GPSPA P P G
Sbjct: 33 PSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQP-----G 87
Query: 82 CETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPA 141
+P P RL L A PR G+ P+ G + G+++ A
Sbjct: 88 PPHQPGFNPASSPRLPLPADSEPDAYTSAPR-GSGPTYCA---GAGNSRAGGGLTKYNSA 143
Query: 142 HGAPGLPRAPKPS----------------------AGRGGKEGGERGTEMLRRLRGSPRP 179
H + +PR PS GR + RG RR P
Sbjct: 144 HSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHH 203
Query: 180 NRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAP- 238
++GP+P + AAG + P R ++ +PP R R +P
Sbjct: 204 TGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPR 263
Query: 239 -SIAR 242
S+AR
Sbjct: 264 SSLAR 268
>gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo
sapiens]
Length = 193
Score = 44.7 bits (104), Expect = 9e-05
Identities = 48/158 (30%), Positives = 56/158 (35%), Gaps = 37/158 (23%)
Query: 98 LHLQVP----EGARQLGPRTGAQPSRHRRQ------RAPGLALVVTGVSRIRPAHGAPGL 147
L LQVP EG L + +P + +RQ R+P A V +R P
Sbjct: 35 LQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAA 94
Query: 148 ---------------PRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHG 192
P P P G GGER E R PRP PR P+ A G
Sbjct: 95 RTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGER----RAPPRPAGAPRGSPMAARG 150
Query: 193 VASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPP 230
A A P L G GA P S+R APP
Sbjct: 151 RARGEAEPPAL----GAGACDSRNQP----DSQRTAPP 180
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 44.3 bits (103), Expect = 1e-04
Identities = 71/218 (32%), Positives = 83/218 (38%), Gaps = 67/218 (30%)
Query: 25 PGVSPRRSP--ALPRPGFP--APGFPALRLPRRRAQLG-------------VKLGGGPSP 67
PGVS + P PRP P AP RL RRRA++G GG SP
Sbjct: 68 PGVSAQGGPLEGTPRPAAPGAAPRPRRQRLRRRRAKVGGWGCARARGLDRRAPGEGGRSP 127
Query: 68 ASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPG 127
G PSP GA +G P AR P R R +RAP
Sbjct: 128 GGGLEPSPGARGA-------VG-----------AAPAAARHRKP-------RGRSRRAPQ 162
Query: 128 LALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGS--PRPNRHPRS 185
+ L R+ P PGL RA + GRG G RG L+G+ P P P
Sbjct: 163 MPL------RVLPPI-LPGLSRAGGATGGRG--LPGRRGLPGRSGLQGAAVPPPVGVPSL 213
Query: 186 GPVPAHGVASAA-----------AGPATLRAPP--GRG 210
P +A+AA AGPA L PP GRG
Sbjct: 214 RGRPWEALATAATPRRCPLQLLRAGPA-LHCPPSVGRG 250
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 44.3 bits (103), Expect = 1e-04
Identities = 75/265 (28%), Positives = 93/265 (35%), Gaps = 52/265 (19%)
Query: 17 RFLRMFAKPGVSPRRSPALP-RPGFPAP-GFPALRL-PRRRAQLGVKLGGGPSPASGARP 73
R P PR +P P RPG P+P G LR P RAQL V GA P
Sbjct: 188 RLSSQLPSPTTLPRAAPLTPYRPGSPSPRGHSRLRSRPPTRAQLRV----------GANP 237
Query: 74 SPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRT-GAQP--SRHRRQRAPGLAL 130
L P P R H PEG RT G P S H+ R P
Sbjct: 238 --------------LSPVPARLRGCHSVRPEGGGVRSCRTLGCCPPTSPHQPPRLP---- 279
Query: 131 VVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGE--RGTEMLRRLRGSPRPNRHPRSGPV 188
V+ + + P L A +AG + + R T + P P R P
Sbjct: 280 ----VTPVPQSVALPSLQSARPAAAGAAPRLSPQAARCTALSTEKPDRPGPPRRP----- 330
Query: 189 PAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGSG 248
PA SA TLR+ P P ++ R P +R R A R PG
Sbjct: 331 PAPTPVSAP----TLRSAPLDAHRLRERLPESSVGPRAE-PARRSRNAAMVSPRHQPGKA 385
Query: 249 RLQGLIFPSTGK--NVQRHKSPPLP 271
R +GL + G + H P +P
Sbjct: 386 RREGLWEEAVGTCGHCTLHSPPAVP 410
Score = 28.5 bits (62), Expect = 6.9
Identities = 47/182 (25%), Positives = 62/182 (34%), Gaps = 39/182 (21%)
Query: 25 PGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGP--SPASGA----------R 72
P SP + P LP P ++ LP ++ G P SP + R
Sbjct: 268 PPTSPHQPPRLPVTPVPQ----SVALPSLQSARPAAAGAAPRLSPQAARCTALSTEKPDR 323
Query: 73 PSPHLEGAGCE--TRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQ------- 123
P P + P L P L ++PE + +GPR A+P+R R
Sbjct: 324 PGPPRRPPAPTPVSAPTLRSAPLDAHRLRERLPESS--VGPR--AEPARRSRNAAMVSPR 379
Query: 124 ------RAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSP 177
R GL G H P +PR P P RG E+L GSP
Sbjct: 380 HQPGKARREGLWEEAVGTCGHCTLHSPPAVPRLPSPVR---SAHSHVRGAELL-PAGGSP 435
Query: 178 RP 179
P
Sbjct: 436 AP 437
>gi|239740948 PREDICTED: hypothetical protein LOC644246 [Homo
sapiens]
Length = 328
Score = 44.3 bits (103), Expect = 1e-04
Identities = 50/166 (30%), Positives = 58/166 (34%), Gaps = 21/166 (12%)
Query: 87 WLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPG 146
+L P+ +LA P P GA PS +Q +P V GV P
Sbjct: 37 FLNRTPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTAL 96
Query: 147 LPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAP 206
RA GRGG EGG + R RP P P HG R
Sbjct: 97 TFRAG--GRGRGGGEGGGGERLLFLLFRALSRPCSAPTG---PEHG----------WRPQ 141
Query: 207 PGR-----GASSETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGS 247
PGR GA SET P + RR P+ P A PGS
Sbjct: 142 PGREGGRAGAESETA-PPPRTNKHRRLQPEPAPRPPPPAASFQPGS 186
Score = 32.7 bits (73), Expect = 0.36
Identities = 42/154 (27%), Positives = 52/154 (33%), Gaps = 27/154 (17%)
Query: 67 PASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQ------VPEGARQLGPRTGAQPSRH 120
P G RP P EG P PR LQ P A P + QP
Sbjct: 134 PEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPA 193
Query: 121 RRQR-----------APGLALVVTGVSRIRPAHGAP---GLPRAPKPSAGRGGKE--GGE 164
+R P V + + RP+ + L R ++ R G+ GE
Sbjct: 194 PPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENGASERAGERRGQGE 253
Query: 165 RGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAA 198
G + LRRLR R PR P A AS A
Sbjct: 254 EGQQRLRRLR-----LRRPRGPPGGAAAAASVMA 282
>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/199 (32%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
Query: 14 ATDRFLRMFAKPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARP 73
+T RF ++ P +P RSPA + +PG LR+P A P P RP
Sbjct: 268 STCRFSPLWVCPAAAPARSPARQQG---SPG--VLRVPPEAAP--------PLP----RP 310
Query: 74 SPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVT 133
PHL C R PR RRL ++ A LGP GA S R P LAL
Sbjct: 311 RPHLL-TRCPPR---APR-LRRLEAGRRLRRTAAPLGPVAGAGSSFGGRPHRPSLAL--- 362
Query: 134 GVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGV 193
G R +P P +A G+E + R R +RH R G A G+
Sbjct: 363 GSDR-----RSPEAPHYLLWAAAVRGQEAHSL-WPLQPRARRQGGSDRHRRRGQSGASGL 416
Query: 194 ASAAAG-----PATLRAPP 207
+AAAG P R PP
Sbjct: 417 GTAAAGAERTSPVGARPPP 435
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 43.9 bits (102), Expect = 2e-04
Identities = 59/201 (29%), Positives = 73/201 (36%), Gaps = 31/201 (15%)
Query: 22 FAKPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPS--------------P 67
F PG RR+ R G A RL A L GGP+ P
Sbjct: 95 FVSPGPLGRRASCSGRAG------SAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGP 148
Query: 68 ASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRH----RRQ 123
AS R SP G E R G RR+ LH P GA +G + H R
Sbjct: 149 ASPPRASPGGR-PGSEARGRSGAECARRVPLH-HGPPGASGVGSERDRKFQLHQTPARGP 206
Query: 124 RAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHP 183
PG++ + G + + P PS G + GGER LRR R P R
Sbjct: 207 PFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLG-EAGGERPARALRRPRA---PGRAG 262
Query: 184 RSGPVPAHGVASAAAGPATLR 204
GP P G+ + + GP R
Sbjct: 263 GGGP-PGGGIPACSIGPGLAR 282
>gi|239749768 PREDICTED: hypothetical protein [Homo sapiens]
Length = 591
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/199 (32%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
Query: 14 ATDRFLRMFAKPGVSPRRSPALPRPGFPAPGFPALRLPRRRAQLGVKLGGGPSPASGARP 73
+T RF ++ P +P RSPA + +PG LR+P A P P RP
Sbjct: 358 STCRFSPLWVCPAAAPARSPARQQG---SPG--VLRVPPEAAP--------PLP----RP 400
Query: 74 SPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVT 133
PHL C R PR RRL ++ A LGP GA S R P LAL
Sbjct: 401 RPHLL-TRCPPR---APR-LRRLEAGRRLRRTAAPLGPVAGAGSSFGGRPHRPSLAL--- 452
Query: 134 GVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGV 193
G R +P P +A G+E + R R +RH R G A G+
Sbjct: 453 GSDR-----RSPEAPHYLLWAAAVRGQEAHSL-WPLQPRARRQGGSDRHRRRGQSGASGL 506
Query: 194 ASAAAG-----PATLRAPP 207
+AAAG P R PP
Sbjct: 507 GTAAAGAERTSPVGARPPP 525
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,527,843
Number of Sequences: 37866
Number of extensions: 1123354
Number of successful extensions: 8480
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 1094
Number of HSP's that attempted gapping in prelim test: 6639
Number of HSP's gapped (non-prelim): 2693
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.