Guide to the Human Genome
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Name: PNLIPRP2 Sequence: fasta or formatted (470aa) NCBI GI: 106507261
Description:

pancreatic lipase-related protein 2

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         23           2
 C cysteine            3.2         15           1
 D aspartate           5.7         27           1
 E glutamate           6.6         31           2
 F phenylalanine       5.5         26           2
 G glycine             9.4         44           2
 H histidine           2.1         10           1
 I isoleucine          4.9         23           2
 K lysine              5.7         27           2
 L leucine             8.1         38           4
 M methionine          1.7          8           2
 N asparagine          4.5         21           2
 P proline             5.3         25           2
 Q glutamine           3.8         18           1
 R arginine            3.6         17           2
 S serine              7.9         37           3
 T threonine           5.5         26           1
 V valine              6.6         31           2
 W tryptophan          1.7          8           1
 Y tyrosine            3.2         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pancreatic lipase-related protein 2 
PNLIP                 0.651   pancreatic lipase precursor 
PNLIPRP1              0.644   pancreatic lipase-related protein 1 
PNLIPRP3              0.441   pancreatic lipase-related protein 3 
LIPH                  0.188   lipase, member H precursor 
LIPI                  0.176   lipase, member I 
LIPG                  0.174   endothelial lipase precursor 
LPL                   0.169   lipoprotein lipase precursor 
LIPC                  0.160   lipase C precursor 
PLA1A                 0.153   phospholipase A1 member A 
ABHD4                 0.007   abhydrolase domain containing 4 
GATA2                 0.007   GATA binding protein 2 isoform 1 
GATA2                 0.007   GATA binding protein 2 isoform 1 
GATA2                 0.007   GATA binding protein 2 isoform 2 
FCHSD1                0.005   FCH and double SH3 domains 1 
MTF1                  0.005   metal-regulatory transcription factor 1 
RYR3                  0.005   ryanodine receptor 3 
ABHD5                 0.005   abhydrolase domain containing 5 
ZNF761                0.005   zinc finger protein 761 
PLCD4                 0.004   phospholipase C, delta 4 
GLIPR1                0.004   GLI pathogenesis-related 1 precursor 
FAM178B               0.004   hypothetical protein LOC51252 isoform A 
CPNE5                 0.004   copine V 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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