Guide to the Human Genome
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Name: DRAM1 Sequence: fasta or formatted (238aa) NCBI GI: 110825978
Description:

DNA-damage regulated autophagy modulator 1

Referenced in:

Lysosomes and Related Organelles
Additional Membrane Functions
p53 Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         17           2
 C cysteine            3.8          9           1
 D aspartate           2.1          5           1
 E glutamate           2.5          6           1
 F phenylalanine       8.4         20           1
 G glycine             6.3         15           2
 H histidine           1.7          4           1
 I isoleucine          8.8         21           2
 K lysine              2.1          5           1
 L leucine             8.8         21           2
 M methionine          2.9          7           1
 N asparagine          3.4          8           1
 P proline             4.2         10           2
 Q glutamine           3.4          8           1
 R arginine            2.1          5           1
 S serine              8.8         21           2
 T threonine           6.3         15           2
 V valine             11.3         27           2
 W tryptophan          1.7          4           1
 Y tyrosine            4.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA-damage regulated autophagy modulator 1 
DRAM2                 0.358   transmembrane protein 77 
TMEM150B              0.107   transmembrane protein 150B 
TMEM150A              0.096   transmembrane protein 150A isoform 1 
FLJ12993              0.090   hypothetical protein LOC441027 
TMEM150A              0.048   transmembrane protein 150A isoform 2 
LOC643677             0.015   hypothetical protein LOC643677 
LOC643677             0.015   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.015   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.015   PREDICTED: hypothetical protein LOC643677 
SLC27A3               0.011   solute carrier family 27 member 3 
SNX19                 0.009   sorting nexin 19 
RFT1                  0.009   RFT1 homolog 
MFSD11                0.009   major facilitator superfamily domain containing 11 [...
PNPLA6                0.007   patatin-like phospholipase domain containing 6 [Hom...
HUWE1                 0.007   HECT, UBA and WWE domain containing 1 
TSSK4                 0.007   testis-specific serine kinase 4 
PNPLA7                0.007   patatin-like phospholipase domain containing 7 isof...
PNPLA7                0.007   patatin-like phospholipase domain containing 7 isof...
PPP2R5E               0.007   epsilon isoform of regulatory subunit B56, protein ph...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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