Guide to the Human Genome
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Name: FLJ12993 Sequence: fasta or formatted (249aa) NCBI GI: 122937458
Description:

hypothetical protein LOC441027

Referenced in:

p53 Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         20           2
 C cysteine            2.8          7           1
 D aspartate           2.8          7           2
 E glutamate           4.8         12           2
 F phenylalanine       7.2         18           1
 G glycine             5.6         14           1
 H histidine           1.6          4           1
 I isoleucine          6.4         16           1
 K lysine              3.6          9           2
 L leucine            12.0         30           2
 M methionine          3.2          8           1
 N asparagine          4.0         10           1
 P proline             3.6          9           2
 Q glutamine           3.6          9           1
 R arginine            3.2          8           2
 S serine              7.6         19           1
 T threonine           4.8         12           1
 V valine              9.2         23           2
 W tryptophan          2.0          5           1
 Y tyrosine            3.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC441027 
TMEM150B              0.172   transmembrane protein 150B 
TMEM150A              0.168   transmembrane protein 150A isoform 1 
DRAM2                 0.105   transmembrane protein 77 
DRAM1                 0.086   DNA-damage regulated autophagy modulator 1 
TMEM150A              0.073   transmembrane protein 150A isoform 2 
SEC62                 0.013   translocation protein 1 
C8orf45               0.010   minichromosome maintenance complex component-like i...
C8orf45               0.010   minichromosome maintenance complex component-like i...
C8orf45               0.010   minichromosome maintenance complex component-like i...
FFAR2                 0.006   free fatty acid receptor 2 
MMS19                 0.006   MMS19 nucleotide excision repair homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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