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Search of human proteins with 169172659
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169172659 PREDICTED: hypothetical protein [Homo sapiens]
(150 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169174331 PREDICTED: hypothetical protein [Homo sapiens] 327 2e-90
gi|169172659 PREDICTED: hypothetical protein [Homo sapiens] 327 2e-90
gi|169172837 PREDICTED: hypothetical protein [Homo sapiens] 327 2e-90
gi|68563515 keratinocyte proline-rich protein [Homo sapiens] 33 0.069
gi|239746423 PREDICTED: hypothetical protein XP_002344208 isofor... 30 0.59
gi|169211534 PREDICTED: hypothetical protein [Homo sapiens] 29 1.3
gi|239755333 PREDICTED: hypothetical protein [Homo sapiens] 29 1.3
gi|169218016 PREDICTED: hypothetical protein [Homo sapiens] 29 1.3
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 29 1.3
gi|169210726 PREDICTED: hypothetical protein [Homo sapiens] 29 1.3
gi|154354966 inner membrane protein, mitochondrial isoform 3 [Ho... 29 1.3
gi|154354962 inner membrane protein, mitochondrial isoform 2 [Ho... 29 1.3
gi|154354964 inner membrane protein, mitochondrial isoform 1 [Ho... 29 1.3
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 29 1.3
gi|73695936 ADAM metallopeptidase with thrombospondin type 1 mot... 29 1.7
gi|21265034 ADAM metallopeptidase with thrombospondin type 1 mot... 29 1.7
gi|52138725 leucine rich repeat and Ig domain containing 4 [Homo... 29 1.7
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 29 1.7
gi|239757423 PREDICTED: hypothetical protein XP_002345427 isofor... 28 2.2
gi|239756562 PREDICTED: hypothetical protein [Homo sapiens] 28 2.2
gi|239753382 PREDICTED: hypothetical protein [Homo sapiens] 28 2.2
gi|239751940 PREDICTED: hypothetical protein XP_002348044 isofor... 28 2.2
gi|239749338 PREDICTED: hypothetical protein XP_002346998 [Homo ... 28 2.2
gi|239747949 PREDICTED: hypothetical protein XP_002346484 [Homo ... 28 2.2
gi|239741844 PREDICTED: hypothetical protein XP_002342324 [Homo ... 28 2.2
gi|157388902 semaphorin 4C [Homo sapiens] 28 2.2
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 28 2.9
gi|21704287 sialidase 4 [Homo sapiens] 28 2.9
gi|46559747 hypothetical protein LOC399947 [Homo sapiens] 28 2.9
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 28 2.9
>gi|169174331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 327 bits (839), Expect = 2e-90
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MLGVPGCLRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGL 60
MLGVPGCLRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGL
Sbjct: 1 MLGVPGCLRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGL 60
Query: 61 LHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVL 120
LHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVL
Sbjct: 61 LHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVL 120
Query: 121 RDGGSKPKPLPGLSGQPPRLLQHNLSGSLQ 150
RDGGSKPKPLPGLSGQPPRLLQHNLSGSLQ
Sbjct: 121 RDGGSKPKPLPGLSGQPPRLLQHNLSGSLQ 150
>gi|169172659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 327 bits (839), Expect = 2e-90
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MLGVPGCLRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGL 60
MLGVPGCLRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGL
Sbjct: 1 MLGVPGCLRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGL 60
Query: 61 LHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVL 120
LHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVL
Sbjct: 61 LHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVL 120
Query: 121 RDGGSKPKPLPGLSGQPPRLLQHNLSGSLQ 150
RDGGSKPKPLPGLSGQPPRLLQHNLSGSLQ
Sbjct: 121 RDGGSKPKPLPGLSGQPPRLLQHNLSGSLQ 150
>gi|169172837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 327 bits (839), Expect = 2e-90
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MLGVPGCLRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGL 60
MLGVPGCLRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGL
Sbjct: 1 MLGVPGCLRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGL 60
Query: 61 LHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVL 120
LHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVL
Sbjct: 61 LHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVL 120
Query: 121 RDGGSKPKPLPGLSGQPPRLLQHNLSGSLQ 150
RDGGSKPKPLPGLSGQPPRLLQHNLSGSLQ
Sbjct: 121 RDGGSKPKPLPGLSGQPPRLLQHNLSGSLQ 150
>gi|68563515 keratinocyte proline-rich protein [Homo sapiens]
Length = 579
Score = 33.5 bits (75), Expect = 0.069
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 11/87 (12%)
Query: 71 SLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAA-------SQWALPQGGWSARCQVLRDG 123
S C + GP CR++ P+ P C SQ PQ W A C LR
Sbjct: 315 SSCSQRRGPKCRIEISSPCCPRQVP-PQRCPVEIPPIRRRSQSCGPQPSWGASCPELRP- 372
Query: 124 GSKPKPLPGLSGQPPRLLQHNLSGSLQ 150
+P+PLP PPR L LQ
Sbjct: 373 HVEPRPLPSFC--PPRRLDQCPESPLQ 397
>gi|239746423 PREDICTED: hypothetical protein XP_002344208 isoform
1 [Homo sapiens]
Length = 195
Score = 30.4 bits (67), Expect = 0.59
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 10/55 (18%)
Query: 10 GQWVARPLRPGKPAPAHSRGGCIQV----------AGAPFLENGGRLAGDTQGNG 54
G W+ P RPG+ H G C +V GAP + R+ DT G G
Sbjct: 4 GTWICLPGRPGRCRKQHDLGNCPEVPGIFKTLALSPGAPDMMQQPRVETDTIGAG 58
>gi|169211534 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 29.3 bits (64), Expect = 1.3
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 13 VARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGN-GSTLTGLLHC---PWLLP 68
V L PG P PAH C AG L G A + N G L C W P
Sbjct: 116 VPNQLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKP 175
Query: 69 CRSLCV 74
++C+
Sbjct: 176 FMTVCL 181
>gi|239755333 PREDICTED: hypothetical protein [Homo sapiens]
Length = 267
Score = 29.3 bits (64), Expect = 1.3
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 22/124 (17%)
Query: 8 LRGQWVARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTG------LL 61
L+GQ + PG APA S G P E G LAG G ++LTG L
Sbjct: 150 LQGQLPSGFAAPG--APAWSGSEDTATGGCPRGEAGTALAGLAMGGTASLTGRGCWINLS 207
Query: 62 H-CPWLLPCR-----SLCVPQEGPVCRV---QRDQGMSPQGTDGPGGCFAASQWALPQGG 112
H P+ P C P++ PV + + S GT+ G + W + + G
Sbjct: 208 HAAPYSAPAHPPAGTRSCSPRKRPVAKAAPSAAEPRASAAGTESRG-----TGWVMARAG 262
Query: 113 WSAR 116
R
Sbjct: 263 GGGR 266
>gi|169218016 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 29.3 bits (64), Expect = 1.3
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 13 VARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGN-GSTLTGLLHC---PWLLP 68
V L PG P PAH C AG L G A + N G L C W P
Sbjct: 116 VPNQLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKP 175
Query: 69 CRSLCV 74
++C+
Sbjct: 176 FMTVCL 181
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 29.3 bits (64), Expect = 1.3
Identities = 29/105 (27%), Positives = 38/105 (36%), Gaps = 20/105 (19%)
Query: 52 GNGSTLTGLLHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGG--CFAASQWALP 109
G G T L P LP + P + P + R G+SP+ D P G +S+ A
Sbjct: 336 GTGPRWTAPLPRPAPLPAKR---PGDSPASKRPRPGGVSPEARDPPKGENPLCSSEAAGE 392
Query: 110 QGGWSARCQVLRDGGS---------------KPKPLPGLSGQPPR 139
G R GG P+P P G+PPR
Sbjct: 393 TGPTQVRGPDALGGGRLQGKGREGKAPGEGVSPRPAPPRLGKPPR 437
>gi|169210726 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 29.3 bits (64), Expect = 1.3
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 13 VARPLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGN-GSTLTGLLHC---PWLLP 68
V L PG P PAH C AG L G A + N G L C W P
Sbjct: 116 VPNQLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKP 175
Query: 69 CRSLCV 74
++C+
Sbjct: 176 FMTVCL 181
>gi|154354966 inner membrane protein, mitochondrial isoform 3
[Homo sapiens]
Length = 747
Score = 29.3 bits (64), Expect = 1.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 7 CLRGQWVARPLRPGKPAPAHSRGGCI--QVAGAPFLENGGRLAG 48
CL G++V RPLRP + G ++AGA L GG + G
Sbjct: 17 CLCGKFVLRPLRPCRRYSTSGSSGLTTGKIAGAGLLFVGGGIGG 60
>gi|154354962 inner membrane protein, mitochondrial isoform 2
[Homo sapiens]
Length = 757
Score = 29.3 bits (64), Expect = 1.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 7 CLRGQWVARPLRPGKPAPAHSRGGCI--QVAGAPFLENGGRLAG 48
CL G++V RPLRP + G ++AGA L GG + G
Sbjct: 17 CLCGKFVLRPLRPCRRYSTSGSSGLTTGKIAGAGLLFVGGGIGG 60
>gi|154354964 inner membrane protein, mitochondrial isoform 1
[Homo sapiens]
Length = 758
Score = 29.3 bits (64), Expect = 1.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 7 CLRGQWVARPLRPGKPAPAHSRGGCI--QVAGAPFLENGGRLAG 48
CL G++V RPLRP + G ++AGA L GG + G
Sbjct: 17 CLCGKFVLRPLRPCRRYSTSGSSGLTTGKIAGAGLLFVGGGIGG 60
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 29.3 bits (64), Expect = 1.3
Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 13/130 (10%)
Query: 16 PLRPGKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLTGLLHCPWLLPCRSLCVP 75
P P PA S GC V GAP G AG + +G+ H P L L +
Sbjct: 475 PFERAAPLPAFS--GCSTVNGAP----GPPAAGARRSSGAGTPR--HSPTLPEPGGLRLE 526
Query: 76 ----QEGPVCRVQRDQGMSPQG-TDGPGGCFAASQWALPQGGWSARCQVLRDGGSKPKPL 130
+ G V PQG PGG ++ +LP +A C L G S+
Sbjct: 527 LPLSRRGAPDPVGALSWRPPQGPVSFPGGAAFSTATSLPSSPAAAACAPLDSGASENSRK 586
Query: 131 PGLSGQPPRL 140
P + P L
Sbjct: 587 PPSASSAPAL 596
>gi|73695936 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 2 preproprotein [Homo sapiens]
Length = 1371
Score = 28.9 bits (63), Expect = 1.7
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 12/61 (19%)
Query: 90 SPQGTDGPGGCFAASQWALPQGG--WS--ARCQVL--------RDGGSKPKPLPGLSGQP 137
+P GP G AS A P+ G WS +R Q+L R P+P PG +G P
Sbjct: 237 APGSGCGPSGHVMASDGAAPRAGLAWSPCSRRQLLSLLSAGRARCVWDPPRPQPGSAGHP 296
Query: 138 P 138
P
Sbjct: 297 P 297
>gi|21265034 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 1 preproprotein [Homo sapiens]
Length = 1427
Score = 28.9 bits (63), Expect = 1.7
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 12/61 (19%)
Query: 90 SPQGTDGPGGCFAASQWALPQGG--WS--ARCQVL--------RDGGSKPKPLPGLSGQP 137
+P GP G AS A P+ G WS +R Q+L R P+P PG +G P
Sbjct: 237 APGSGCGPSGHVMASDGAAPRAGLAWSPCSRRQLLSLLSAGRARCVWDPPRPQPGSAGHP 296
Query: 138 P 138
P
Sbjct: 297 P 297
>gi|52138725 leucine rich repeat and Ig domain containing 4 [Homo
sapiens]
Length = 593
Score = 28.9 bits (63), Expect = 1.7
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 64 PWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGW---SARCQVL 120
P C+ + + GP + + G + G G W P G W + R +VL
Sbjct: 405 PGHFTCKPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTVSWMRPHGAWLGRAGRVRVL 464
Query: 121 RDG 123
DG
Sbjct: 465 EDG 467
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 28.9 bits (63), Expect = 1.7
Identities = 40/143 (27%), Positives = 49/143 (34%), Gaps = 19/143 (13%)
Query: 3 GVPGCLRGQWVAR----PLRPGKPA--PAHSRGGCIQVAGAPFLENGGRLAGDTQGNGST 56
G G RG+ R P +PA P S G G + G G Q +GS
Sbjct: 62 GADGLSRGERGPRRAAVPELSAQPAGSPRASLAGSDGGGGGGSARSSGISLGYDQRHGSP 121
Query: 57 LTGLLHCPWLLPCRSLCVPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSAR 116
+G RS P GP +S G+ G G +A LP G A
Sbjct: 122 RSG----------RSDPRPGPGPPSVGSARSSVSSLGSRGSAGAYADF---LPPGACPAP 168
Query: 117 CQVLRDGGSKPKPLPGLSGQPPR 139
+ G P PLP L P R
Sbjct: 169 ARSPEPAGPAPFPLPALPLPPGR 191
>gi|239757423 PREDICTED: hypothetical protein XP_002345427 isoform
1 [Homo sapiens]
Length = 195
Score = 28.5 bits (62), Expect = 2.2
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 10/55 (18%)
Query: 10 GQWVARPLRPGKPAPAHSRGGCIQV----------AGAPFLENGGRLAGDTQGNG 54
G W+ P PG+ H G C +V GAP + R+ DT G G
Sbjct: 4 GTWICLPGHPGRCRKQHDLGNCPEVPGIFKTLALSPGAPDMMQQPRVETDTIGAG 58
>gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 28.5 bits (62), Expect = 2.2
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 15 RPLRPG-KPAPAHSRGGC---IQVAGAPFLENGGRLAGDTQGNGSTLTGLLHCPW 65
+P R G K APA + GG Q A A +N G G G L GLL C W
Sbjct: 178 KPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRRLLGLLPCLW 232
>gi|239753382 PREDICTED: hypothetical protein [Homo sapiens]
Length = 331
Score = 28.5 bits (62), Expect = 2.2
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 3 GVPGCLRGQWVARPLRPGKPA-PAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLT 58
GVP Q AR P P P RG C ++ G GG++ QG+G+ +
Sbjct: 85 GVPEAACAQ--ARGGSPKLPEQPCRGRGACWRLGGRQLRPGGGKVQSSCQGSGAAFS 139
>gi|239751940 PREDICTED: hypothetical protein XP_002348044 isoform
1 [Homo sapiens]
Length = 195
Score = 28.5 bits (62), Expect = 2.2
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 10/55 (18%)
Query: 10 GQWVARPLRPGKPAPAHSRGGCIQV----------AGAPFLENGGRLAGDTQGNG 54
G W+ P PG+ H G C +V GAP + R+ DT G G
Sbjct: 4 GTWICLPGHPGRCRKQHDLGNCPEVPGIFKTLALSPGAPDMMQQPRVETDTIGAG 58
>gi|239749338 PREDICTED: hypothetical protein XP_002346998 [Homo
sapiens]
Length = 230
Score = 28.5 bits (62), Expect = 2.2
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 20 GKPAPAHSRGGCIQVAGAPFLENGGRLAGDTQGNG 54
G+ P GC+ P LEN GRL D + NG
Sbjct: 86 GRLTPDLENNGCL----TPHLENNGRLTPDLENNG 116
Score = 27.7 bits (60), Expect = 3.8
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 37 APFLENGGRLAGDTQGNGSTLTGLLHCPW 65
AP LEN GRLA + NG + G H W
Sbjct: 189 APHLENNGRLAPQLENNG--IMGTEHPTW 215
>gi|239747949 PREDICTED: hypothetical protein XP_002346484 [Homo
sapiens]
Length = 331
Score = 28.5 bits (62), Expect = 2.2
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 3 GVPGCLRGQWVARPLRPGKPA-PAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLT 58
GVP Q AR P P P RG C ++ G GG++ QG+G+ +
Sbjct: 85 GVPEAACAQ--ARGGSPKLPEQPCRGRGACWRLGGRQLRPGGGKVQSSCQGSGAAFS 139
>gi|239741844 PREDICTED: hypothetical protein XP_002342324 [Homo
sapiens]
Length = 331
Score = 28.5 bits (62), Expect = 2.2
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 3 GVPGCLRGQWVARPLRPGKPA-PAHSRGGCIQVAGAPFLENGGRLAGDTQGNGSTLT 58
GVP Q AR P P P RG C ++ G GG++ QG+G+ +
Sbjct: 85 GVPEAACAQ--ARGGSPKLPEQPCRGRGACWRLGGRQLRPGGGKVQSSCQGSGAAFS 139
>gi|157388902 semaphorin 4C [Homo sapiens]
Length = 833
Score = 28.5 bits (62), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Query: 115 ARCQVLRDGGSKPKPLPGLSGQP 137
ARCQ GG P P PG+ GQP
Sbjct: 750 ARCQ---PGGGPPSPPPGIPGQP 769
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 28.1 bits (61), Expect = 2.9
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 74 VPQEGPVCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVLRDGGSKPKPLPGL 133
V PV R+ ++ + PQ T GP +A Q +R G +P+ G
Sbjct: 824 VLMSSPVGRILEEERLEPQATPGPSQAASAFGAGPTQPPHPVVPSPVRPSGGRPEGFLGQ 883
Query: 134 SGQPPRLLQHNLSG 147
G+ R + +L G
Sbjct: 884 RGRAVRPTRLSLEG 897
>gi|21704287 sialidase 4 [Homo sapiens]
Length = 496
Score = 28.1 bits (61), Expect = 2.9
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 68 PCRSLCVPQEGP-VCRVQRDQGMSPQGTDGPGGCFAASQWALPQGGWSARCQVLRDGGSK 126
P L P GP V + + P+G PGG F+ Q P+G DG +
Sbjct: 312 PGSPLQPPLLGPGVHEPPEEAAVDPRGGQVPGGPFSRLQ---PRG----------DGPRQ 358
Query: 127 PKPLPGLSG 135
P P PG+SG
Sbjct: 359 PGPRPGVSG 367
>gi|46559747 hypothetical protein LOC399947 [Homo sapiens]
Length = 197
Score = 28.1 bits (61), Expect = 2.9
Identities = 23/87 (26%), Positives = 31/87 (35%), Gaps = 25/87 (28%)
Query: 18 RPGKPAPAHSRGGCI--QVAGAPFL--ENGGRLAGDTQGNGSTLTGLLHCPWLLPCRSLC 73
RPG+ AP H++ + Q +PF N L+ + G LPC+ C
Sbjct: 117 RPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPG--------------LPCQGPC 162
Query: 74 VPQEGPVCRVQRDQGMSPQGTDGPGGC 100
P P SPQG C
Sbjct: 163 APPPPP-------PASSPQGAHAASSC 182
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 28.1 bits (61), Expect = 2.9
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 15/79 (18%)
Query: 75 PQEGPVCRVQRD-----------QGMSPQGTDGPGGCFAASQWALPQGGWSARCQVLRDG 123
PQEG R R +G PQG PG Q P GG + Q G
Sbjct: 167 PQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPG----KPQGPPPAGGNPQQPQAPPAG 222
Query: 124 GSKPKPLPGLSGQPPRLLQ 142
+ P P G+PPR Q
Sbjct: 223 KPQGPPPPPQGGRPPRPAQ 241
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.141 0.483
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,818,016
Number of Sequences: 37866
Number of extensions: 538348
Number of successful extensions: 1392
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1346
Number of HSP's gapped (non-prelim): 97
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.