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Search of human proteins with 169167975
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
(155 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo ... 348 1e-96
gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo ... 348 1e-96
gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo ... 346 4e-96
gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo s... 308 9e-85
gi|7706501 WW domain binding protein 11 [Homo sapiens] 66 1e-11
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 62 3e-10
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 62 3e-10
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso... 61 3e-10
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 61 4e-10
gi|160707881 formin 2 [Homo sapiens] 60 8e-10
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 59 1e-09
gi|146134388 YLP motif containing 1 [Homo sapiens] 59 2e-09
gi|157168329 formin 1 [Homo sapiens] 58 4e-09
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 58 4e-09
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 58 4e-09
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof... 57 6e-09
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 55 3e-08
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 55 3e-08
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 54 7e-08
gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ... 54 7e-08
gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ... 54 7e-08
gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ... 54 7e-08
gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ... 54 7e-08
gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s... 54 7e-08
gi|148612835 zinc finger protein 207 isoform c [Homo sapiens] 54 7e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 54 7e-08
gi|73808090 zinc finger protein 207 isoform b [Homo sapiens] 54 7e-08
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 52 3e-07
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 51 3e-07
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 51 3e-07
>gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 348 bits (893), Expect = 1e-96
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG 60
MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG
Sbjct: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG 60
Query: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAP 120
KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAP
Sbjct: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAP 120
Query: 121 GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT
Sbjct: 121 GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
>gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 348 bits (893), Expect = 1e-96
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG 60
MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG
Sbjct: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG 60
Query: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAP 120
KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAP
Sbjct: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAP 120
Query: 121 GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT
Sbjct: 121 GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
>gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 346 bits (888), Expect = 4e-96
Identities = 154/155 (99%), Positives = 154/155 (99%)
Query: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG 60
MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG
Sbjct: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG 60
Query: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAP 120
KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGP MMPMMGPPPPGMMPGGPAP
Sbjct: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPPMMPMMGPPPPGMMPGGPAP 120
Query: 121 GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT
Sbjct: 121 GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
>gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo
sapiens]
Length = 159
Score = 308 bits (790), Expect = 9e-85
Identities = 138/155 (89%), Positives = 142/155 (91%)
Query: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG 60
MPKFYCDYC+TYLTHDSP VRKTHCSGRKHKENVKDYYQKWM+EQAQSLIDKTTAAFQQG
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAP 120
KIPP PFSAPPP GAMIPPPPSLPGPP PGMMPAPHM GP MMPMMGPPPPGMMP GPAP
Sbjct: 61 KIPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGGPPMMPMMGPPPPGMMPVGPAP 120
Query: 121 GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
GMRP MGGH PMMPG P++RPPA PMMVPTRP T
Sbjct: 121 GMRPPMGGHMPMMPGPPMMRPPARPMMVPTRPGMT 155
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 65.9 bits (159), Expect = 1e-11
Identities = 53/140 (37%), Positives = 63/140 (45%), Gaps = 32/140 (22%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPA----------PFSAPPPVGAMIPPPPSLPGPPH 88
QK KE++ S D T+ A Q + PP P PPP+G PP PGPP
Sbjct: 371 QKQHKEESHS--DGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPT 428
Query: 89 ---PGMMPA--PHMRGPAMMPMMGP--------PPPGMMPG---GPAPGMRPLMGGHRPM 132
PG P P +R P M + GP PPPG PG GP PG+ P G P
Sbjct: 429 GLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP---GPPPR 485
Query: 133 MPGSPVIRPPACPMMVPTRP 152
P P + PPA P + P RP
Sbjct: 486 GP-PPRLPPPAPPGIPPPRP 504
Score = 54.3 bits (129), Expect = 4e-08
Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 63 PPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPA-PHMRGPAMMPMMGPPPPGMMPGGPAP 120
PP PPP G PPP LP P PG+ P P M P ++P +GP PPG+ P P P
Sbjct: 475 PPGLPPGPPPRG----PPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLP 529
Score = 45.4 bits (106), Expect = 2e-05
Identities = 36/83 (43%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 64 PAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPP-PPGMMPGGPAPGM 122
P P PP PP P GPP PG+ P P RGP P + PP PPG+ P P PGM
Sbjct: 453 PLPRLLPPGPPPGRPPGPPP-GPP-PGLPPGPPPRGPP--PRLPPPAPPGIPP--PRPGM 506
Query: 123 R--PLMGGHRPMMPGSPVIRPPA 143
PL+ P+ P P + PPA
Sbjct: 507 MRPPLV---PPLGPAPPGLFPPA 526
Score = 29.3 bits (64), Expect = 1.4
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 15/78 (19%)
Query: 64 PAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGP-----AMMPMMG------PP--- 109
P P P +I P LPG P ++ GP +++P++G PP
Sbjct: 140 PLPDMPHAPSNILIQDIP-LPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRK 198
Query: 110 PPGMMPGGPAPGMRPLMG 127
PPG PG P P + + G
Sbjct: 199 PPGPPPGPPPPQVVQMYG 216
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 61.6 bits (148), Expect = 3e-10
Identities = 52/149 (34%), Positives = 66/149 (44%), Gaps = 23/149 (15%)
Query: 21 RKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPP-----------APFSA 69
+KT S +K +++ D Y A + QQG IPP AP
Sbjct: 99 QKTQESQKKKQQDDSDEYDD-DDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP 157
Query: 70 P--PPVGAMIPP-----PPSLPGPPHPGMMPAPHMR--GPAMMPMMGPPPPGMMPGGPAP 120
P PP+ +PP PP +PG P PGMMP M GP + P+M PPGM P P P
Sbjct: 158 PGIPPLMPGVPPLMPGMPPVMPGMP-PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRP 216
Query: 121 GMRPLMGGHRPMMPGSPVIRPPACPMMVP 149
G+ P+ PG + RPPA VP
Sbjct: 217 GIPPMTQAQAVSAPGI-LNRPPAPTATVP 244
Score = 58.9 bits (141), Expect = 2e-09
Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 31 KENVKDYYQKWMKEQAQSLIDKTTAA---FQQGKIPPAPFSAPPPVGAMIPPPPSLPGPP 87
++ ++ +K ++ + D +AA FQ + P PP +PP P PG P
Sbjct: 98 EQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP 157
Query: 88 HPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMM 147
PG+ P P + P+M PP +MPG P PGM P MGG P PG P + P P M
Sbjct: 158 -PGIPPLM----PGVPPLMPGMPP-VMPGMP-PGMMP-MGGMMPPGPGIPPLMPGMPPGM 209
Query: 148 VPTRPR 153
P PR
Sbjct: 210 PPPVPR 215
Score = 40.4 bits (93), Expect = 6e-04
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 34/86 (39%)
Query: 65 APFSAPP--PVGAMIPPPPSLPG--------PPH--------------PGMMPAPHMRGP 100
AP PP P+G M+PP P +P PPH PG MP P+ +GP
Sbjct: 392 APIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMP-PYGQGP 450
Query: 101 AMMPMM--GPP-------PPGMMPGG 117
M+P GPP PP M GG
Sbjct: 451 PMVPPYQGGPPRPPMGMRPPVMSQGG 476
Score = 27.7 bits (60), Expect = 4.1
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 103 MPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACP 145
+P G P G P GP GM P +P +P +RPP P
Sbjct: 386 LPRPGQAPIGNPPVGPIGGMMP----PQPGIPQQQGMRPPMPP 424
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 61.6 bits (148), Expect = 3e-10
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 62 IPPAPFSAPPPVG---AMIPP-PPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGG 117
+PP AP P G A +PP PP P PP P M P P GP M P+ PP +P G
Sbjct: 276 VPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVP--TGPPMAPVPPGPPMARVPPG 333
Query: 118 -------PAPGMRPLMGG--HRPMMPGSPVIRPPACPMMVPTRPR 153
P P M PL G P+ PG P+ P P M P PR
Sbjct: 334 PPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPR 378
Score = 55.1 bits (131), Expect = 2e-08
Identities = 38/106 (35%), Positives = 45/106 (42%), Gaps = 17/106 (16%)
Query: 62 IPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMR-------------GPAMMPMMGP 108
+P P PV M P PP +P PP P + P P M GP M P+ P
Sbjct: 238 VPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPV--P 295
Query: 109 PPPGMMPGGPAPGMRPLMGG--HRPMMPGSPVIRPPACPMMVPTRP 152
P P M P P P M P+ G P+ PG P+ R P P M P
Sbjct: 296 PWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPP 341
Score = 49.7 bits (117), Expect = 1e-06
Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 62 IPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMR----GPAMMPMMGPPPPGMMPGG 117
+PP P AP P G + P P PGPP + P P M GP M P+ PP +P
Sbjct: 303 VPPWPPMAPVPTGPPMAPVP--PGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLP-- 358
Query: 118 PAPGMRPLMGG--HRPMMPGSPVIRPPACPMMVPTRP 152
P P M PL G P+ P S V P+ + P
Sbjct: 359 PGPPMAPLPPGPPMAPLPPRSHVPHTGLAPVHITWAP 395
Score = 47.8 bits (112), Expect = 4e-06
Identities = 47/130 (36%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 40 KWMKEQAQSLIDKTTAA--------FQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGM 91
KW + Q ++ T A F G AP P ++P P P P P M
Sbjct: 193 KWKRNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPM 252
Query: 92 MPAPHM-----RGP-AMMPMMGPPPPG--MMPGGPAPGMRPLMGGHRPMMPGSPVIRPPA 143
P P M R P A MP M P PPG M P P P M P+ P P +PV PP
Sbjct: 253 PPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPV----PPWPPMAPV--PPW 306
Query: 144 CPMM-VPTRP 152
PM VPT P
Sbjct: 307 PPMAPVPTGP 316
Score = 40.0 bits (92), Expect = 8e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
++PP P A P P PP P PP P M P P GP M P+ PP P M P P
Sbjct: 329 RVPPGPPMARVP-----PGPPMAPLPPGPPMAPLP--PGPPMAPL--PPGPPMAPLPP 377
Score = 38.9 bits (89), Expect = 0.002
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAP 120
++PP P AP P P PP P PP P M P P GP M P+ PP + G AP
Sbjct: 338 RVPPGPPMAPLP-----PGPPMAPLPPGPPMAPLP--PGPPMAPL--PPRSHVPHTGLAP 388
>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
isoform B' [Homo sapiens]
Length = 240
Score = 61.2 bits (147), Expect = 3e-10
Identities = 45/105 (42%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMM-PAPHM 97
Q+ M Q + + AA I AP PP G PPPP G P PGMM P P M
Sbjct: 139 QQVMTPQGRGTVAAAAAA-ATASIAGAPTQYPPGRGG--PPPPMGRGAPPPGMMGPPPGM 195
Query: 98 RGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPP 142
R P PM PP G G P PGMRP G R P P +RPP
Sbjct: 196 RPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRG--PPPPGMRPP 238
Score = 47.4 bits (111), Expect = 5e-06
Identities = 33/69 (47%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
Query: 60 GKIPPAPFSAPPPVGAMIPPPPSLP--GPPH--------PGMMPAPHMRGPAMMPMMGPP 109
G PP APPP G M PPP P GPP P MP P MR P M GPP
Sbjct: 174 GPPPPMGRGAPPP-GMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPP-GMRGPP 231
Query: 110 PPGMMPGGP 118
PPGM P P
Sbjct: 232 PPGMRPPRP 240
Score = 43.9 bits (102), Expect = 6e-05
Identities = 36/103 (34%), Positives = 42/103 (40%), Gaps = 25/103 (24%)
Query: 59 QGKIPPAPFSAPPPV-GAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGG 117
+G + A +A + GA PP GPP P G PPPGMM G
Sbjct: 147 RGTVAAAAAAATASIAGAPTQYPPGRGGPPPP--------------MGRGAPPPGMM--G 190
Query: 118 PAPGMRPLMGGHRPMMPG--------SPVIRPPACPMMVPTRP 152
P PGMRP MG + PG P +RPP M P P
Sbjct: 191 PPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPP 233
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 60.8 bits (146), Expect = 4e-10
Identities = 42/106 (39%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
Query: 60 GKIPPAPFSAPPPVGAMIPP-PPSLPGPPHPGMMPAPHMRGPAMMPMMG--PPPPGMMPG 116
G PP P PP + PP PP PGPP PG + P + GP P G PPPP + PG
Sbjct: 225 GPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGP---PNRGDRPPPPVLFPG 281
Query: 117 GP--APGMRPLMGGHRPMMPG--------SPVIRPPACPMMVPTRP 152
P P + PL G P +PG P PP P P RP
Sbjct: 282 QPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRP 327
Score = 53.1 bits (126), Expect = 9e-08
Identities = 38/108 (35%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 60 GKIPPAPFSAPPPVGAMIPPPPSLPG----------------PPHPGMMPAPHMRGPAMM 103
G++ P P + PP G PPP PG PP PG P P GP
Sbjct: 256 GQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPP---GPP-P 311
Query: 104 PMMGPPPP--GMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVP 149
P GPPPP P P P PL P +PG P PP P + P
Sbjct: 312 PQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNP 359
Score = 48.9 bits (115), Expect = 2e-06
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 60 GKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPA 119
G PP P PPP PPPP PP PG P P GP P+ PPP + GP
Sbjct: 295 GPPPPVPGYGPPPG----PPPPQQGPPPPPGPFP-PRPPGPLGPPLTLAPPPHLP--GPP 347
Query: 120 PGMRPLMGGHRPMMPGSPVIRPPACPMMVPT 150
PG P P +P PP +PT
Sbjct: 348 PGAPP------PAPHVNPAFFPPPTNSGMPT 372
Score = 47.4 bits (111), Expect = 5e-06
Identities = 37/100 (37%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Query: 55 AAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHP---GMMPAPHMRGPAMMP-MMGPPP 110
AAF QG F P G P P GPP P G P GP P GPPP
Sbjct: 195 AAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPP 254
Query: 111 PGMMPGGPAPGMRPLMGGHRP----MMPGSPVIRPPACPM 146
PG + P G P G RP + PG P +PP P+
Sbjct: 255 PGQVLPPPLAG--PPNRGDRPPPPVLFPGQPFGQPPLGPL 292
Score = 47.0 bits (110), Expect = 7e-06
Identities = 36/88 (40%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 63 PPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAM---MPMMGP-----PPPGMM 114
PP P PPP G ++PPP L GPP+ G P P + P P +GP PPP
Sbjct: 246 PPGP-PGPPPPGQVLPPP--LAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVP- 301
Query: 115 PGGPAPGMRPLMGGHRPMMPGSPVIRPP 142
GP PG P G P PG RPP
Sbjct: 302 GYGPPPGPPPPQQG-PPPPPGPFPPRPP 328
Score = 43.9 bits (102), Expect = 6e-05
Identities = 31/80 (38%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
Query: 58 QQGKIPPAPFSAPPPVGAMIPP-----PPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPG 112
QQG PP P P G + PP PP LPGPP PAPH+ P PPP
Sbjct: 313 QQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVN-----PAFFPPPTN 367
Query: 113 M-MPGGPAPGMRPLMGGHRP 131
MP + G P RP
Sbjct: 368 SGMPTSDSRGPPPTDPYGRP 387
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 60.1 bits (144), Expect = 8e-10
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 959 LPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1018
Query: 119 APGMRPLMGG---HRPMMPGSPVIRPPACP 145
P PL G P +PG+ + PP P
Sbjct: 1019 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1048
Score = 60.1 bits (144), Expect = 8e-10
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 970 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1029
Query: 119 APGMRPLMGG---HRPMMPGSPVIRPPACP 145
P PL G P +PG+ + PP P
Sbjct: 1030 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1059
Score = 60.1 bits (144), Expect = 8e-10
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 981 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1040
Query: 119 APGMRPLMGG---HRPMMPGSPVIRPPACP 145
P PL G P +PG+ + PP P
Sbjct: 1041 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1070
Score = 60.1 bits (144), Expect = 8e-10
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 992 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1051
Query: 119 APGMRPLMGG---HRPMMPGSPVIRPPACP 145
P PL G P +PG+ + PP P
Sbjct: 1052 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1081
Score = 60.1 bits (144), Expect = 8e-10
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 1003 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1062
Query: 119 APGMRPLMGG---HRPMMPGSPVIRPPACP 145
P PL G P +PG+ + PP P
Sbjct: 1063 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1092
Score = 59.7 bits (143), Expect = 1e-09
Identities = 40/101 (39%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPG------PPHPG--MMPAPHMRG-----PAMMPMMG 107
+P A PPP+ GA IPPPP LPG PP PG + P P + G P +P G
Sbjct: 937 LPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 996
Query: 108 PPPPGMMPGGPAPGMRPLMGG---HRPMMPGSPVIRPPACP 145
PPP +PG P PL G P +PG+ + PP P
Sbjct: 997 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1037
Score = 59.7 bits (143), Expect = 1e-09
Identities = 38/96 (39%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 62 IPPAP------FSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPG 112
IPP P PPP+ GA IPPPP LPG P P +P + P +P +G PPP
Sbjct: 1096 IPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPP 1155
Query: 113 MMPGGPAPGMRPLMGG---HRPMMPGSPVIRPPACP 145
+PG P PL G P +PG + PP P
Sbjct: 1156 PLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLP 1191
Score = 59.3 bits (142), Expect = 1e-09
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 1036 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1095
Query: 119 APGMRPLMG---GHRPMMPGSPVIRPPACP 145
P PL G P +PG+ + PP P
Sbjct: 1096 IPPPPPLPGVGIPPPPPLPGAGIPPPPPLP 1125
Score = 58.9 bits (141), Expect = 2e-09
Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 1025 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1084
Query: 119 APGMRPLMGG---HRPMMPGSPVIRPPACP 145
P PL G P +PG + PP P
Sbjct: 1085 IPPPPPLPGAGIPPPPPLPGVGIPPPPPLP 1114
Score = 58.9 bits (141), Expect = 2e-09
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 1047 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVG 1106
Query: 119 APGMRPLMGG---HRPMMPGSPVIRPPACP 145
P PL G P +PG+ + PP P
Sbjct: 1107 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1136
Score = 57.8 bits (138), Expect = 4e-09
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 62 IPPAP-------FSAPPPVGAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPG 112
IPP P PP GA IPPPP LPG P P +P + P +P G PPP
Sbjct: 920 IPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPP 979
Query: 113 MMPGGPAPGMRPLMGG---HRPMMPGSPVIRPPACP 145
+PG P PL G P +PG+ + PP P
Sbjct: 980 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1015
Score = 57.8 bits (138), Expect = 4e-09
Identities = 35/87 (40%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 1069 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAG 1128
Query: 119 APGMRPLMGGHRPMMPGSPVIRPPACP 145
P PL G P P P + P P
Sbjct: 1129 IPPPPPLPGAGIPPPPPLPRVGIPPPP 1155
Score = 57.4 bits (137), Expect = 5e-09
Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 1113 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG 1172
Query: 119 APGMRPLMG---GHRPMMPGSPVIRPPACP 145
P PL G P +PG + PP P
Sbjct: 1173 IPPPPPLPGVGIPPPPPLPGVGIPPPPPLP 1202
Score = 57.0 bits (136), Expect = 6e-09
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 62 IPPAPFSAPPPV-GAMIPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGG- 117
+P A PPP+ GA IPPPP LPG P P +P + P +P G PPP +PG
Sbjct: 1080 LPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1139
Query: 118 -PAPGMRPLMG-GHRPMMPGSPVIRPPACP 145
P P P +G P +PG+ + PP P
Sbjct: 1140 IPPPPPLPRVGIPPPPPLPGAGIPPPPPLP 1169
Score = 55.5 bits (132), Expect = 2e-08
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 62 IPPAPFSAPPPVGAM-IPPPPSLPGP--PHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P A PPP+ + IPPPP LPG P P +P + P +P +G PPP +PG
Sbjct: 1135 LPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVG 1194
Query: 119 APGMRPLMGG---HRPMMPGSPVIRPPACPMMVP 149
P PL G P +PG + PA P+ P
Sbjct: 1195 IPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPP 1228
Score = 53.1 bits (126), Expect = 9e-08
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 62 IPPAPFSAPPPVGA--MIPPPPSLPGPPHPGMMPAPHMRGPAMMPM-----MGPPPPGMM 114
+P PPP+ M+PPPP P P G+ P P + G ++P+ G PPP +
Sbjct: 891 LPSTAIPQPPPLQGTEMLPPPP--PPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPL 948
Query: 115 PGGPAPGMRPLMGGHRPM---MPGSPVIRPPACP 145
PG P PL G P+ +PG+ + PP P
Sbjct: 949 PGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLP 982
Score = 52.0 bits (123), Expect = 2e-07
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 62 IPPAP------FSAPPPV-GAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMM 114
IPP P PPP+ G IPPPP LPG G+ P P + G + P PP P
Sbjct: 1173 IPPPPPLPGVGIPPPPPLPGVGIPPPPPLPG---AGIPPPPPLPGMGIPPAPAPPLPPPG 1229
Query: 115 PGGPAPGMRPLMGGHRPMMP---GSPVIRPPACPMMVPTRP 152
G P P + P+ G P++P S + P C + P P
Sbjct: 1230 TGIPPPPLLPVSG--PPLLPQVGSSTLPTPQVCGFLPPPLP 1268
Score = 50.1 bits (118), Expect = 8e-07
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 63 PPAPF----SAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMG----PPPPGMM 114
PP P S+ P +G + PPPP LPG P + P P P+ G PPPP +
Sbjct: 859 PPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTL---PSTAIPQPPPLQGTEMLPPPPPPL 915
Query: 115 PGGPAPGMRPLMGG---HRPMMPGSPVIRPPACP 145
PG P PL G P +PG+ + PP P
Sbjct: 916 PGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLP 949
Score = 35.8 bits (81), Expect = 0.015
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 82 SLPGPPHPGMMPAPHMRGPAMMPMMG--PPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVI 139
++P PP P P + MP +G PPPP +PG P + P + G+ ++
Sbjct: 854 NIPSPP-----PLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEML 908
Query: 140 RPPACPM 146
PP P+
Sbjct: 909 PPPPPPL 915
Score = 33.9 bits (76), Expect = 0.058
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 62 IPPAPFSA--PPPVGAMIPPPPSLP--GPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGG 117
IPPAP PP G IPPPP LP GPP + + + P + + PP P + G
Sbjct: 1217 IPPAPAPPLPPPGTG--IPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPPPLPSGLFG- 1273
Query: 118 PAPGMRPLMGGHR-PMMPGSPV 138
GM G + P+ P P+
Sbjct: 1274 --LGMNQDKGSRKQPIEPCRPM 1293
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 59.3 bits (142), Expect = 1e-09
Identities = 40/100 (40%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 61 KIPPAPFS----APPPVGAMIPPPP--SLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMM 114
K PP P PP+ +PPPP LP PP P PAP GP P + PP PG+
Sbjct: 231 KRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAP--SGPPGPPQLPPPAPGVH 288
Query: 115 PGGPAPGMRPLMGGHRPMMPG----SPVIRPPACPMMVPT 150
P PAP + P G P PG +P + PPA + PT
Sbjct: 289 P--PAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPT 326
Score = 59.3 bits (142), Expect = 1e-09
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
Query: 62 IPPAPFSAPPPVGAMIPPPPSLPGPPHPGM-MPAPHMRGPAM-----MPMMGPPPPGMMP 115
+PP P + P P G P PP LP PP PG+ PAP + PA P + PP PG+ P
Sbjct: 261 LPPMPPTGPAPSGP--PGPPQLP-PPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHP 317
Query: 116 GGPAPGMRPLMGGHRPMMPG----SPVIRPPACPMMVPTRP 152
PAPG+ P G P PG +P + PPA P + P P
Sbjct: 318 --PAPGVHPPTSGVHPPAPGVHPPAPGVHPPA-PGVHPPAP 355
Score = 54.3 bits (129), Expect = 4e-08
Identities = 41/108 (37%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 60 GKIPPAPFSAPPPVGAMIPPP---PSLPG--PPHPGMMPAP----HMRGPAM---MPMMG 107
G PPAP PP G P P P PG PP PG+ P P H + P + P +
Sbjct: 328 GVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVH 387
Query: 108 PPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRP---PACPMMVPTRP 152
P PG+ P PAPGM P G P PG P P P + P+ P
Sbjct: 388 PQAPGVHP--PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNP 433
Score = 53.5 bits (127), Expect = 7e-08
Identities = 35/94 (37%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 60 GKIPPAPFSAPPPVGAMIPPPPSL-PGPP--HPGMMPAPHMRGPAMMPM---MGPPPPGM 113
G PPAP PPP + P P + P P HP P H P M P + P PPG+
Sbjct: 356 GVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHP-QAPGVHPPAPGMHPQAPGVHPQPPGV 414
Query: 114 MPGGPA-----PGMRPLMGGHRPMMPGSPVIRPP 142
P P PG+ P G P P P++RPP
Sbjct: 415 HPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPP 448
Score = 52.8 bits (125), Expect = 1e-07
Identities = 38/98 (38%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 60 GKIPPAPFSAPPPVGAMIPPP---PSLPG--PPHPGMMPAPHMRGPAMMPMMGPPPPGMM 114
G PPAP PP G P P P PG PP PG+ P P P + PP PG+
Sbjct: 286 GVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPP-APGVHPPAPGVH 344
Query: 115 PGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRP 152
P PAPG+ P G P PG + PP + P P
Sbjct: 345 P--PAPGVHPPAPGVHPPAPG---VHPPPSAGVHPQAP 377
Score = 52.4 bits (124), Expect = 2e-07
Identities = 41/107 (38%), Positives = 48/107 (44%), Gaps = 22/107 (20%)
Query: 60 GKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMP-APHMRGPAMMPMMGPPPPGMMPGGP 118
G PPAP PP G + PP S PP PG+ P AP + PA P + PP PG+ P P
Sbjct: 307 GVHPPAPGVHPPAPG--VHPPTSGVHPPAPGVHPPAPGVHPPA--PGVHPPAPGVHPPAP 362
Query: 119 -------------APGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRP 152
APG+ P P PG + PPA P M P P
Sbjct: 363 GVHPPPSAGVHPQAPGVHPAAPAVHPQAPG---VHPPA-PGMHPQAP 405
Score = 51.2 bits (121), Expect = 3e-07
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 22/118 (18%)
Query: 37 YYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPP-PVGAMIPPPPSLPG-PPHPGMMPA 94
++ W +E Q + F+ K PPAP S P P G PPPP + G PP P +
Sbjct: 195 FWTHWNRETKQFFLQ---FHFKMEK-PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPL--- 247
Query: 95 PHMRGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRP 152
P +P PPPPG +P P P P G PG P + PPA P + P P
Sbjct: 248 -----PESLP---PPPPGGLPLPPMPPTGPAPSGP----PGPPQLPPPA-PGVHPPAP 292
Score = 50.8 bits (120), Expect = 5e-07
Identities = 43/115 (37%), Positives = 50/115 (43%), Gaps = 24/115 (20%)
Query: 60 GKIPPAPFSAPPPVGAMIPPP---PSLPG--PPHPGMMP-APHMRGPAMMPMMGPPP--- 110
G PPAP PP G P P P PG PP PG+ P AP + PA P + PPP
Sbjct: 314 GVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPA--PGVHPPPSAG 371
Query: 111 -----PGMMPGGP-----APGMRPLMGGHRPMMPG---SPVIRPPACPMMVPTRP 152
PG+ P P APG+ P G P PG P P+ P + P P
Sbjct: 372 VHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPP 426
Score = 34.3 bits (77), Expect = 0.044
Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 17/73 (23%)
Query: 60 GKIPPAPFSAPPPVGAMIPPP---PSLPG---------PPHPGMMPAPHMRGPAMMPMMG 107
G PPAP P G PP PS PG P +PG+ P M PM+
Sbjct: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPP-----TPMPPMLR 446
Query: 108 PPPPGMMPGGPAP 120
PP P PG P
Sbjct: 447 PPLPSEGPGNIPP 459
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 58.9 bits (141), Expect = 2e-09
Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 40/154 (25%)
Query: 30 HKENVKDYYQKWMKEQA-----QSLIDKTTAAFQQGK--------IPP--APFSA-PPPV 73
HK+ +++Y ++W Q QS + + +FQ K +PP P+S PPP+
Sbjct: 471 HKDQLQEYEKQWKTWQGHMKATQSYLQEKVNSFQNMKNQYMGNMSMPPPFVPYSQMPPPL 530
Query: 74 GAMIPP--PPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMP----GGPAPGMRPLM- 126
M PP PPSLP P P +PA +P G PPP M P P PGM P +
Sbjct: 531 PTMPPPVLPPSLPPPVMPPALPAT-------VPPPGMPPPVMPPSLPTSVPPPGMPPSLS 583
Query: 127 -GGHRPMMP-------GSPVIRPPACPMMVPTRP 152
G P++P G P + PP P + T P
Sbjct: 584 SAGPPPVLPPPSLSSAGPPPVLPP--PSLSSTAP 615
Score = 42.4 bits (98), Expect = 2e-04
Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 21/129 (16%)
Query: 44 EQAQSLIDKTTAAFQQGKIPPAPFSAPPPV------GAMIPPPPSLPGPPHPGM------ 91
+Q Q + K Q P P PPPV G PPPP +P PP P +
Sbjct: 62 QQLQQMHQKQMQCVLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQ 121
Query: 92 ----MPAPHMRG--PAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPAC- 144
H R P ++PM PP P P M P P P P PP
Sbjct: 122 QYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQP-PPSYYPPTSS 180
Query: 145 -PMMVPTRP 152
P + P +P
Sbjct: 181 QPYLPPAQP 189
Score = 41.2 bits (95), Expect = 4e-04
Identities = 36/101 (35%), Positives = 44/101 (43%), Gaps = 20/101 (19%)
Query: 62 IPPAPFSA------PPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMP 115
+PP+ SA PPP + PPP LP P P P M P P+ PP P
Sbjct: 578 MPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLP---PLSSATPP---P 631
Query: 116 GGPAPGMRPLMGGHRPMMPGSPVIRPPAC---PMMVPTRPR 153
G P PG+ G P + +PV PPA VP +PR
Sbjct: 632 GIPPPGVPQ---GIPPQLTAAPV--PPASSSQSSQVPEKPR 667
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 18 PPVRKTHCSGRKHKENVKD-YYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAM 76
PPV K S + + +D +Y W Q L + + + IP AP PPPV +
Sbjct: 1559 PPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKS--ETAAIPSAPVLPPPPVHSS 1616
Query: 77 IPPPPSLPGPPHPGMMPAP 95
IPPP +P P P P
Sbjct: 1617 IPPPGPVPMGMPPMSKPPP 1635
Score = 35.4 bits (80), Expect = 0.020
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 63 PPAPFSAPPPVGAMIPPPPSLPGPPHP-GMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPG 121
PP + PPP+G PP S+ P P P R P +P PPPP +P P P
Sbjct: 1508 PPGSYRPPPPMGK---PPGSIVRPSAPPARSSVPVTRPPVPIPP--PPPPPPLP-PPPPV 1561
Query: 122 MRP 124
++P
Sbjct: 1562 IKP 1564
Score = 34.3 bits (77), Expect = 0.044
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 26/110 (23%)
Query: 43 KEQAQSLIDKTTAAFQQGKIPPA----------PFSAPPPVGAMIPPPPSLPGPPHPGMM 92
KEQ Q + D + +PP P PPP G+ PPPP + PP +
Sbjct: 1470 KEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPP-GSYRPPPP-MGKPPGSIVR 1527
Query: 93 P-APHMRGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRP 141
P AP R + +P+ PP P +P P P P+ P PVI+P
Sbjct: 1528 PSAPPAR--SSVPVTRPPVP--IPPPPPP---------PPLPPPPPVIKP 1564
Score = 33.5 bits (75), Expect = 0.075
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 67 FSAPPPVGAMIPPPPSL--PGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRP 124
F + P + +PP S PGM P P P P MG PP G + AP R
Sbjct: 1479 FGSEPQMADHLPPQESRLQNTSSRPGMYPPPGSYRPP--PPMGKPP-GSIVRPSAPPARS 1535
Query: 125 LMGGHRPMMPGSPVIRPPACPMMVP 149
+ RP +P P PP P P
Sbjct: 1536 SVPVTRPPVPIPPPPPPPPLPPPPP 1560
Score = 31.6 bits (70), Expect = 0.29
Identities = 16/36 (44%), Positives = 17/36 (47%)
Query: 75 AMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPP 110
A IP P LP PP +P P M PM PPP
Sbjct: 1600 AAIPSAPVLPPPPVHSSIPPPGPVPMGMPPMSKPPP 1635
Score = 30.8 bits (68), Expect = 0.49
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 62 IPPAPF-SAPPPVGAMIPPPPSLPG--PPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
+P P SA PP G PPP +P PP P P + P P ++P
Sbjct: 619 MPLPPLSSATPPPGI---PPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPV 675
Query: 119 APGMRPLMGGHRPMMPGSP 137
+ G P H P+ P
Sbjct: 676 SFGSAPPTTYHPPLQSAGP 694
Score = 29.6 bits (65), Expect = 1.1
Identities = 29/115 (25%), Positives = 36/115 (31%), Gaps = 44/115 (38%)
Query: 63 PPAPFSAPPPVGAMIPPPPSLPGPPHPGMM--PAPHMRG--------------------- 99
PP P PPPV P + PGP + AP G
Sbjct: 15 PPPPVPPPPPVAL----PEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQK 70
Query: 100 -------PAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMM 147
P +P PPP +MPG GG+ P P + PP P +
Sbjct: 71 QMQCVLQPHHLPPPPLPPPPVMPG----------GGYGDWQPPPPPMPPPPGPAL 115
Score = 29.6 bits (65), Expect = 1.1
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Query: 63 PPAPFSAPPPVGAMIPPPPS------LPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPG 116
P P PP + A PP S +P P P ++P P G A PP P
Sbjct: 636 PGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPS 695
Query: 117 GPAPGMRPL 125
PL
Sbjct: 696 EQVNSKAPL 704
Score = 29.3 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 19/50 (38%)
Query: 66 PFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMP 115
P S P P G+ +PP S PP P P +P P P P
Sbjct: 147 PESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPP 196
Score = 29.3 bits (64), Expect = 1.4
Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 10/87 (11%)
Query: 63 PPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGM 122
PP P PPP + PPPP + P + + G+ G+
Sbjct: 1542 PPVPIPPPPPPPPLPPPPPVI--KPQTSAVEQERWDEDSFY--------GLWDTNDEQGL 1591
Query: 123 RPLMGGHRPMMPGSPVIRPPACPMMVP 149
+P +PV+ PP +P
Sbjct: 1592 NSEFKSETAAIPSAPVLPPPPVHSSIP 1618
Score = 26.9 bits (58), Expect = 7.0
Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 20/100 (20%)
Query: 62 IPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPP----------- 110
+PP+ PPP PP+ P P P+P + P + P P
Sbjct: 158 MPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSP-SQSPPSQSYLAPTPSYSSSSSSSQS 216
Query: 111 -----PGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACP 145
+P A RP G + + P PP+ P
Sbjct: 217 YLSHSQSYLPSSQASPSRPSQGHSKSQLLAPP---PPSAP 253
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 57.8 bits (138), Expect = 4e-09
Identities = 35/84 (41%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 63 PPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGM 122
PP P PPP A PPPP P PP P P+ GP PPPPG+ P P PG+
Sbjct: 684 PPPPPPLPPPSSAGPPPPP--PPPPLPNSPAPPNPGGPP----PAPPPPGLAP-PPPPGL 736
Query: 123 RPLMGGHRPMMPGSPVIRPPACPM 146
+G P P I P+CPM
Sbjct: 737 FFGLGSSSSQCPRKPAIE-PSCPM 759
Score = 56.2 bits (134), Expect = 1e-08
Identities = 39/101 (38%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 55 AAFQQGKIPPAPFSAPPP------VGAMIPPPPSLP---GPP-HPGMMPAPHMRGPAMMP 104
A+ QQ +PP P S PPP +G++ P PP P GPP P P P + P+
Sbjct: 638 ASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAG 697
Query: 105 MMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACP 145
PPPP +P PAP P GG P P P + PP P
Sbjct: 698 PPPPPPPPPLPNSPAP---PNPGG-PPPAPPPPGLAPPPPP 734
Score = 32.0 bits (71), Expect = 0.22
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 13/63 (20%)
Query: 63 PPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGM 122
PP P PPP PPPP L PP PG+ G P P + P P M
Sbjct: 713 PPNP-GGPPPA----PPPPGLAPPPPPGL-----FFGLGSSSSQCPRKPAIEPSCP---M 759
Query: 123 RPL 125
+PL
Sbjct: 760 KPL 762
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 57.8 bits (138), Expect = 4e-09
Identities = 40/97 (41%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 64 PAPFSAPPPVGAMIPPPPSLPG----PPHPGMMPAPHMRGPAMMPMMG----PPPPGMMP 115
P+P S P G IPPPP LPG PP P +P P P+ G PPPP +P
Sbjct: 655 PSPSSLPG--GTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLP 712
Query: 116 GGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRP 152
GG PG+ P P PG P I PP M +P P
Sbjct: 713 GG--PGIPP-----PPPFPGGPGIPPPPPGMGMPPPP 742
Score = 47.8 bits (112), Expect = 4e-06
Identities = 44/150 (29%), Positives = 59/150 (39%), Gaps = 43/150 (28%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPS--------------LP 84
+K M + + I + + +PPAP P G +IPPPP+ P
Sbjct: 550 KKEMASLSAAAITVPPSVPSRAPVPPAP-PLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP 608
Query: 85 GPPHPG---------------MMPAPHMRGPAMMPM-------MGPPPPGMMPGGPA-PG 121
PP PG + P P + G A +P +G P P +PGG A P
Sbjct: 609 PPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPP 668
Query: 122 MRPLMGGHR-----PMMPGSPVIRPPACPM 146
PL G R P +PGS I PP P+
Sbjct: 669 PPPLPGSARIPPPPPPLPGSAGIPPPPPPL 698
Score = 42.7 bits (99), Expect = 1e-04
Identities = 33/76 (43%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 62 IPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPG 121
IPP P P G PPPP LPG PG+ P P G +P PPPPGM G P P
Sbjct: 691 IPPPPPPLPGEAGMPPPPPP-LPG--GPGIPPPPPFPGGPGIP---PPPPGM--GMPPP- 741
Query: 122 MRPLMGGHRPMMPGSP 137
P G P P P
Sbjct: 742 --PPFGFGVPAAPVLP 755
Score = 42.4 bits (98), Expect = 2e-04
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 23/122 (18%)
Query: 31 KENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPP--PVGAMIPPPPSLPG--- 85
K++++ + E A+ + A + + A + PP P A +PP P LPG
Sbjct: 525 KQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSG 584
Query: 86 -----PPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIR 140
PP PG P P PPPP +PGG + P +PG I
Sbjct: 585 TIIPPPPAPGDSTTPPPPPPP------PPPPPPLPGG-------VCISSPPSLPGGTAIS 631
Query: 141 PP 142
PP
Sbjct: 632 PP 633
Score = 40.4 bits (93), Expect = 6e-04
Identities = 29/68 (42%), Positives = 32/68 (47%), Gaps = 14/68 (20%)
Query: 58 QQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMG-PPPPGMMPG 116
+ G PP P P P G IPPPP PG PG+ P P P MG PPPP G
Sbjct: 701 EAGMPPPPP---PLPGGPGIPPPPPFPG--GPGIPPPP--------PGMGMPPPPPFGFG 747
Query: 117 GPAPGMRP 124
PA + P
Sbjct: 748 VPAAPVLP 755
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 57.8 bits (138), Expect = 4e-09
Identities = 40/97 (41%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 64 PAPFSAPPPVGAMIPPPPSLPG----PPHPGMMPAPHMRGPAMMPMMG----PPPPGMMP 115
P+P S P G IPPPP LPG PP P +P P P+ G PPPP +P
Sbjct: 664 PSPSSLPG--GTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLP 721
Query: 116 GGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRP 152
GG PG+ P P PG P I PP M +P P
Sbjct: 722 GG--PGIPP-----PPPFPGGPGIPPPPPGMGMPPPP 751
Score = 47.8 bits (112), Expect = 4e-06
Identities = 44/150 (29%), Positives = 59/150 (39%), Gaps = 43/150 (28%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPS--------------LP 84
+K M + + I + + +PPAP P G +IPPPP+ P
Sbjct: 559 KKEMASLSAAAITVPPSVPSRAPVPPAP-PLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP 617
Query: 85 GPPHPG---------------MMPAPHMRGPAMMPM-------MGPPPPGMMPGGPA-PG 121
PP PG + P P + G A +P +G P P +PGG A P
Sbjct: 618 PPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPP 677
Query: 122 MRPLMGGHR-----PMMPGSPVIRPPACPM 146
PL G R P +PGS I PP P+
Sbjct: 678 PPPLPGSARIPPPPPPLPGSAGIPPPPPPL 707
Score = 42.7 bits (99), Expect = 1e-04
Identities = 33/76 (43%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 62 IPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPG 121
IPP P P G PPPP LPG PG+ P P G +P PPPPGM G P P
Sbjct: 700 IPPPPPPLPGEAGMPPPPPP-LPG--GPGIPPPPPFPGGPGIP---PPPPGM--GMPPP- 750
Query: 122 MRPLMGGHRPMMPGSP 137
P G P P P
Sbjct: 751 --PPFGFGVPAAPVLP 764
Score = 42.4 bits (98), Expect = 2e-04
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 23/122 (18%)
Query: 31 KENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPP--PVGAMIPPPPSLPG--- 85
K++++ + E A+ + A + + A + PP P A +PP P LPG
Sbjct: 534 KQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSG 593
Query: 86 -----PPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIR 140
PP PG P P PPPP +PGG + P +PG I
Sbjct: 594 TIIPPPPAPGDSTTPPPPPPP------PPPPPPLPGG-------VCISSPPSLPGGTAIS 640
Query: 141 PP 142
PP
Sbjct: 641 PP 642
Score = 40.4 bits (93), Expect = 6e-04
Identities = 29/68 (42%), Positives = 32/68 (47%), Gaps = 14/68 (20%)
Query: 58 QQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMG-PPPPGMMPG 116
+ G PP P P P G IPPPP PG PG+ P P P MG PPPP G
Sbjct: 710 EAGMPPPPP---PLPGGPGIPPPPPFPG--GPGIPPPP--------PGMGMPPPPPFGFG 756
Query: 117 GPAPGMRP 124
PA + P
Sbjct: 757 VPAAPVLP 764
>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
B [Homo sapiens]
Length = 231
Score = 57.0 bits (136), Expect = 6e-09
Identities = 40/96 (41%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMM-PAPHM 97
Q+ M Q + + AA I AP PP G PPPP G P PGMM P P M
Sbjct: 139 QQVMTPQGRGTVAAAAAA-ATASIAGAPTQYPPGRGG--PPPPMGRGAPPPGMMGPPPGM 195
Query: 98 RGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMM 133
R P PM PP G G P PGMRP G R ++
Sbjct: 196 RPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGLL 231
Score = 43.5 bits (101), Expect = 7e-05
Identities = 36/97 (37%), Positives = 43/97 (44%), Gaps = 21/97 (21%)
Query: 59 QGKIPPAPFSAPPPV-GAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGG 117
+G + A +A + GA PP GPP P G PPPGMM G
Sbjct: 147 RGTVAAAAAAATASIAGAPTQYPPGRGGPPPP--------------MGRGAPPPGMM--G 190
Query: 118 PAPGMRPLMGGHRPMMP--GSPVIRPPACPMMVPTRP 152
P PGMRP MG + P G+P+ PP P M P P
Sbjct: 191 PPPGMRPPMGPPMGIPPGRGTPMGMPP--PGMRPPPP 225
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 54.7 bits (130), Expect = 3e-08
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 28 RKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPP 87
+K E +K+ + + + Q+ + +++ P P +APP G PPPP P PP
Sbjct: 519 QKRDEKIKELEAEIQQLRTQAQVLSSSSGI------PGPPAAPPLPGVGPPPPP--PAPP 570
Query: 88 HPG--MMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRP 131
PG +P P P MM + PPPP ++ GGP P P +GG P
Sbjct: 571 LPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGGPPP--PPPLGGVPP 614
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 54.7 bits (130), Expect = 3e-08
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 28 RKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPP 87
+K E +K+ + + + Q+ + +++ P P +APP G PPPP P PP
Sbjct: 519 QKRDEKIKELEAEIQQLRTQAQVLSSSSGI------PGPPAAPPLPGVGPPPPP--PAPP 570
Query: 88 HPG--MMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRP 131
PG +P P P MM + PPPP ++ GGP P P +GG P
Sbjct: 571 LPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGGPPP--PPPLGGVPP 614
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 53.5 bits (127), Expect = 7e-08
Identities = 36/91 (39%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 58 QQGKIPPAPFS-APPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGM--- 113
+ G +PP P APPP PPPP GPP P PA GP + PPPPG
Sbjct: 338 RSGPLPPVPLGIAPPPPTPRGPPPPGRGGPP-PPPPPATGRSGP-----LPPPPPGAGGP 391
Query: 114 -MPGGPAPGMRPLMGGHRPMMPGSPVIRPPA 143
MP P P P G+ P P P PA
Sbjct: 392 PMPPPPPPPPPPPSSGNGPAPPPLPPALVPA 422
Score = 44.7 bits (104), Expect = 3e-05
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 55 AAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMM 114
A + G +PP P A P M PPPP P PP G PAP PA++P G P G
Sbjct: 374 ATGRSGPLPPPPPGAGGP--PMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGR 431
Query: 115 PGGPAPGMRPLMGGHRPMMPGSPVIRPP 142
+ + P P S ++PP
Sbjct: 432 GALLDQIRQGIQLNKTPGAPESSALQPP 459
Score = 43.9 bits (102), Expect = 6e-05
Identities = 32/88 (36%), Positives = 34/88 (38%), Gaps = 15/88 (17%)
Query: 78 PPPPS-----LPGPPHPG--------MMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRP 124
PPPPS LP PP G + P P P GPPPPG GGP P P
Sbjct: 316 PPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGR--GGPPPPPPP 373
Query: 125 LMGGHRPMMPGSPVIRPPACPMMVPTRP 152
G P+ P P P P P P
Sbjct: 374 ATGRSGPLPPPPPGAGGPPMPPPPPPPP 401
Score = 28.1 bits (61), Expect = 3.2
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 61 KIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPP-PPGMMPGGPA 119
++PP P A +PP P PG G P G A + + P G PA
Sbjct: 158 QLPPPPTPANEERRGGLPPLPLHPGGDQGGPPVGPLSLGLATVDIQNPDITSSRYRGLPA 217
Query: 120 PGMRP 124
PG P
Sbjct: 218 PGPSP 222
>gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 53.5 bits (127), Expect = 7e-08
Identities = 41/105 (39%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMM-PAPHM 97
Q+ M Q + + A I AP PP G PPPP P PG+M P P M
Sbjct: 139 QQVMTPQGRGTVAAAAVA-ATASIAGAPTQYPPGRGT--PPPPVGRATPPPGIMAPPPGM 195
Query: 98 RGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPP 142
R P P+ PP G G P PGMRP G R P P +RPP
Sbjct: 196 RPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRG--PPPPGMRPP 238
>gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 53.5 bits (127), Expect = 7e-08
Identities = 41/105 (39%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMM-PAPHM 97
Q+ M Q + + A I AP PP G PPPP P PG+M P P M
Sbjct: 139 QQVMTPQGRGTVAAAAVA-ATASIAGAPTQYPPGRGT--PPPPVGRATPPPGIMAPPPGM 195
Query: 98 RGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPP 142
R P P+ PP G G P PGMRP G R P P +RPP
Sbjct: 196 RPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRG--PPPPGMRPP 238
>gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 53.5 bits (127), Expect = 7e-08
Identities = 41/105 (39%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMM-PAPHM 97
Q+ M Q + + A I AP PP G PPPP P PG+M P P M
Sbjct: 139 QQVMTPQGRGTVAAAAVA-ATASIAGAPTQYPPGRGT--PPPPVGRATPPPGIMAPPPGM 195
Query: 98 RGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPP 142
R P P+ PP G G P PGMRP G R P P +RPP
Sbjct: 196 RPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRG--PPPPGMRPP 238
>gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 53.5 bits (127), Expect = 7e-08
Identities = 41/105 (39%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMM-PAPHM 97
Q+ M Q + + A I AP PP G PPPP P PG+M P P M
Sbjct: 139 QQVMTPQGRGTVAAAAVA-ATASIAGAPTQYPPGRGT--PPPPVGRATPPPGIMAPPPGM 195
Query: 98 RGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPP 142
R P P+ PP G G P PGMRP G R P P +RPP
Sbjct: 196 RPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRG--PPPPGMRPP 238
>gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 53.5 bits (127), Expect = 7e-08
Identities = 41/105 (39%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 39 QKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMM-PAPHM 97
Q+ M Q + + A I AP PP G PPPP P PG+M P P M
Sbjct: 139 QQVMTPQGRGTVAAAAVA-ATASIAGAPTQYPPGRGT--PPPPVGRATPPPGIMAPPPGM 195
Query: 98 RGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPP 142
R P P+ PP G G P PGMRP G R P P +RPP
Sbjct: 196 RPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRG--PPPPGMRPP 238
>gi|148612835 zinc finger protein 207 isoform c [Homo sapiens]
Length = 494
Score = 53.5 bits (127), Expect = 7e-08
Identities = 50/164 (30%), Positives = 63/164 (38%), Gaps = 37/164 (22%)
Query: 21 RKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAM---- 76
+KT S +K +++ D Y A + QQG IPP PPV
Sbjct: 99 QKTQESQKKKQQDDSDEYDD-DDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP 157
Query: 77 --IPP-----PPSLPGPPH--PGMMPAPHMR----------------------GPAMMPM 105
IPP PP +PG P PGM P H + GP + P+
Sbjct: 158 PGIPPLMPGVPPLMPGMPPVMPGMPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPL 217
Query: 106 MGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVP 149
M PPGM P P PG+ P+ PG + RPPA VP
Sbjct: 218 MPGMPPGMPPPVPRPGIPPMTQAQAVSAPGI-LNRPPAPTATVP 260
Score = 51.6 bits (122), Expect = 3e-07
Identities = 43/137 (31%), Positives = 58/137 (42%), Gaps = 17/137 (12%)
Query: 31 KENVKDYYQKWMKEQAQSLIDKTTAA---FQQGKIPPAPFSAPPPVGAMIPPPPSLPGPP 87
++ ++ +K ++ + D +AA FQ + P PP +PP P PG P
Sbjct: 98 EQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP 157
Query: 88 HPGMMPAPHMRG-PAMMPMMGPPPPGMMPGGP----------APGMRPLMGGHRPMMPGS 136
PG+ P M G P +MP M P PGM PG + MGG P PG
Sbjct: 158 -PGIPPL--MPGVPPLMPGMPPVMPGMPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGI 214
Query: 137 PVIRPPACPMMVPTRPR 153
P + P P M P PR
Sbjct: 215 PPLMPGMPPGMPPPVPR 231
Score = 40.4 bits (93), Expect = 6e-04
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 34/86 (39%)
Query: 65 APFSAPP--PVGAMIPPPPSLPG--------PPH--------------PGMMPAPHMRGP 100
AP PP P+G M+PP P +P PPH PG MP P+ +GP
Sbjct: 408 APIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMP-PYGQGP 466
Query: 101 AMMPMM--GPP-------PPGMMPGG 117
M+P GPP PP M GG
Sbjct: 467 PMVPPYQGGPPRPPMGMRPPVMSQGG 492
Score = 27.7 bits (60), Expect = 4.1
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 103 MPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACP 145
+P G P G P GP GM P +P +P +RPP P
Sbjct: 402 LPRPGQAPIGNPPVGPIGGMMP----PQPGIPQQQGMRPPMPP 440
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 53.5 bits (127), Expect = 7e-08
Identities = 43/112 (38%), Positives = 49/112 (43%), Gaps = 25/112 (22%)
Query: 63 PPAPF---SAPPPVGAMIPP---PPSLPG----PPHPG------MMPAPHMRGPAMMPMM 106
PP+P + PPP GA PP PPSL G PPH G + P GPA P
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 107 GPP-PPGMMPGGP--APGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
G P PP P P +PG P G P P + PP+ P PT P T
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKGA-----PTPPAVTPPS-PKGTPTLPATT 1353
Score = 41.6 bits (96), Expect = 3e-04
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
Query: 65 APFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRP 124
+P + P P GA P +LP P G P ++G P PP P P P+P P
Sbjct: 1046 SPAATPLPKGAPTTPAATLPSPK--GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Query: 125 LMGGHRPMMPGSPVIRP-----PACPMMVPTRPR 153
+ P P + P P P P P+
Sbjct: 1104 MPPAATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137
Score = 41.2 bits (95), Expect = 4e-04
Identities = 33/97 (34%), Positives = 35/97 (36%), Gaps = 10/97 (10%)
Query: 60 GKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPA 119
G P+P AP P A P P P P P P P PA+ P P P G P
Sbjct: 976 GPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTP----PAVTP---PSPKGSPAATPF 1028
Query: 120 P-GMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
P G P GSP P P PT P T
Sbjct: 1029 PKGASTPPAATPPSPKGSPAATP--LPKGAPTTPAAT 1063
Score = 40.8 bits (94), Expect = 5e-04
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 21/103 (20%)
Query: 63 PPAPF---SAPPPVGAMIPP---PPSLPG----PPHPGMMPAPHMRGPAMMPMMGPPPPG 112
PP+P + P P GA +PP PPS G PPH G P P+ + PPP
Sbjct: 1087 PPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPK 1146
Query: 113 MMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
P PA P P + PP P PT P T
Sbjct: 1147 GAPTTPAA---------TPPSPKGGLATPP--PKGAPTTPAAT 1178
Score = 39.7 bits (91), Expect = 0.001
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 7/96 (7%)
Query: 63 PPAP---FSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPA 119
PP+P + PPP GA P + P P G + P +G P PP P P+
Sbjct: 1156 PPSPKGGLATPPPKGAPTTPAATPPSPK--GGLATPSPKGAPTTPAATPPSPKGGLATPS 1213
Query: 120 PGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
P P P P + P P PT P T
Sbjct: 1214 PKGAPTTPAATPPSPKGGLATP--SPKGAPTTPAAT 1247
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/81 (33%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 63 PPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPA-PHMRGPAMMPMMGPPPPGMMPGGPAPG 121
PP+P P P P PP P PA P +G P PP P P P+P
Sbjct: 947 PPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPK 1006
Query: 122 MRPLMGGHRPMMP-GSPVIRP 141
P P P GSP P
Sbjct: 1007 GAPTPPAVTPPSPKGSPAATP 1027
Score = 38.1 bits (87), Expect = 0.003
Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 63 PPAP---FSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPA 119
PP+P + P P GA P + P P G + P +G P PP P P+
Sbjct: 1179 PPSPKGGLATPSPKGAPTTPAATPPSPK--GGLATPSPKGAPTTPAATPPSPKGGLATPS 1236
Query: 120 PGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
P P P P PP P PT P T
Sbjct: 1237 PKGAPTTPAATPPSPKGGPATPP--PKGAPTPPAAT 1270
Score = 37.4 bits (85), Expect = 0.005
Identities = 30/106 (28%), Positives = 34/106 (32%), Gaps = 18/106 (16%)
Query: 58 QQGKIPPAPFSAP--------PPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPP 109
++G PAP AP P P P +P P P P P P PP
Sbjct: 897 KEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTP--------PAATPP 948
Query: 110 PPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
P P P+P P P P P P PT P T
Sbjct: 949 SPKGGPATPSPKWAPTPPAATPPSPKGGPATP--SPKGAPTPPAAT 992
Score = 36.2 bits (82), Expect = 0.012
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query: 50 IDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPA-PHMRGPAMMPMMGP 108
+ T+++ ++ + PAP P P P PP P PA P + P P
Sbjct: 911 LSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATP 970
Query: 109 PPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRP-----PACPMMVPTRPR 153
P P P P+P P P P P P P + P P+
Sbjct: 971 PSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPK 1020
Score = 36.2 bits (82), Expect = 0.012
Identities = 34/107 (31%), Positives = 37/107 (34%), Gaps = 17/107 (15%)
Query: 64 PAPFSAPPPVGAMIPPP------PSLPG--------PPHPGMMPA-PHMRGPAMMPMMGP 108
P P AP A +P P PSL G PP P PA P +G M P P
Sbjct: 1051 PLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP 1110
Query: 109 PPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
P P P P P P + PP P PT P T
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPP--PKGAPTTPAAT 1155
Score = 36.2 bits (82), Expect = 0.012
Identities = 33/100 (33%), Positives = 37/100 (37%), Gaps = 8/100 (8%)
Query: 63 PPAPFSAPP-PVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMG-PPPPGMMPGGPAP 120
P P + PP P G + P P P P P GPA P G P PP P
Sbjct: 1218 PTTPAATPPSPKGGLATPSPK-GAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKG 1276
Query: 121 GMR--PLMGGHRP--MMPGSPVIRPPACPMM-VPTRPRKT 155
G+ P G P + P SP P P PT P T
Sbjct: 1277 GLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAAT 1316
Score = 35.8 bits (81), Expect = 0.015
Identities = 25/90 (27%), Positives = 29/90 (32%), Gaps = 2/90 (2%)
Query: 66 PFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRPL 125
P P P +P P P P P PA M + P P +P P+P P
Sbjct: 882 PKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPT 941
Query: 126 MGGHRPMMPGSPVIRPPACPMMVPTRPRKT 155
P P P P PT P T
Sbjct: 942 PPAATPPSPKGGPATP--SPKWAPTPPAAT 969
Score = 34.7 bits (78), Expect = 0.034
Identities = 29/100 (29%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Query: 51 DKTTAAFQQGKIPPAPFSAPPPVGAMIPPP---PSLPG--PPHPGMMPAPHMRGPAMMPM 105
D T A + AP ++ P G P P+LP PP P PAP + P
Sbjct: 1432 DLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPK 1491
Query: 106 MGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACP 145
P P M P + P P P S R P P
Sbjct: 1492 KAPATPAPMGAPTLPAVIPSSPKEVPATPSSR--RDPIAP 1529
Score = 33.9 bits (76), Expect = 0.058
Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 63 PPAP---FSAPPPVGAMIPP---PPSLPG----PPHPGMMPAPHMRGPAMMPMMGPPPPG 112
PP+P + PPP GA P PPS G PP G P P+ + P P
Sbjct: 1133 PPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPK 1192
Query: 113 MMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACP 145
P PA GG P P A P
Sbjct: 1193 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATP 1225
Score = 33.9 bits (76), Expect = 0.058
Identities = 34/124 (27%), Positives = 42/124 (33%), Gaps = 24/124 (19%)
Query: 53 TTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLP------GPPHPGMMPAPHMRG-PAMMPM 105
T + + G P AP P P P P G P P P +G P P
Sbjct: 1270 TPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPP 1329
Query: 106 MG-PPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVI-------RPPAC-------PMMVPT 150
G P PP + P P+P P + P G P PPA P M P
Sbjct: 1330 KGAPTPPAVTP--PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPP 1387
Query: 151 RPRK 154
P++
Sbjct: 1388 SPKR 1391
Score = 33.5 bits (75), Expect = 0.075
Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 63 PPAP---FSAPPPVGAMIPP---PPSLPG----PPHPGMMPAPHMRGPAMMPMMGPPPPG 112
PP+P + PP GA P PPS G PP G P P+ + PPP
Sbjct: 1110 PPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK 1169
Query: 113 MMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACP 145
P PA GG P P A P
Sbjct: 1170 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATP 1202
Score = 33.1 bits (74), Expect = 0.098
Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 48 SLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMG 107
S + + + +FQ K PA +P P P PS P P + P P ++
Sbjct: 834 SFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPT-PSVVN 892
Query: 108 PPPPGMMPGGPAPGMRPLMGGHRPMMPGSP-VIRPPACPMMVPTRP 152
P P P PAP P + M SP R P +P P
Sbjct: 893 LPFPKEGPATPAPKQAPALS----MTSSSPKKARATPAPKGIPASP 934
Score = 32.3 bits (72), Expect = 0.17
Identities = 29/118 (24%), Positives = 40/118 (33%), Gaps = 26/118 (22%)
Query: 54 TAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPH-------PGMMPAPHMRGPAMMPMM 106
T A ++ IPPA P IP P P P P + P+ + P+ ++
Sbjct: 1541 TLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELL 1600
Query: 107 GPP------------PPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRP 152
PP PP + P P G P G+P PP P + P
Sbjct: 1601 IPPAVTSPSPKEAPTPPAVTPPSPEKGPA------TPAPKGTPT-SPPVTPSSLKDSP 1651
Score = 31.2 bits (69), Expect = 0.37
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 16/100 (16%)
Query: 72 PVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMP----GGPAPG---MRP 124
P A+IPP ++P P +P P PP + P G P+P + P
Sbjct: 1544 PKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPP 1603
Query: 125 LMGGHRPM-MPGSPVIRPPA--------CPMMVPTRPRKT 155
+ P P P + PP+ P PT P T
Sbjct: 1604 AVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVT 1643
Score = 30.4 bits (67), Expect = 0.64
Identities = 34/121 (28%), Positives = 46/121 (38%), Gaps = 23/121 (19%)
Query: 53 TTAAFQQGKIPPAPFSAPPPVGAMIPPP----PSLPG----PPHPGMMP--------APH 96
TT + ++G PPA + AM PP P++P P P ++P P
Sbjct: 1361 TTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPV 1420
Query: 97 MRGPAMMPMMGP-PPPGMMPGG--PAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRPR 153
R A P G PP + P AP GG P P S P P + P P+
Sbjct: 1421 TREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGG--PATPSSK--GDPTLPAVTPPSPK 1476
Query: 154 K 154
+
Sbjct: 1477 E 1477
Score = 26.9 bits (58), Expect = 7.0
Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Query: 53 TTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMR-GPAMMPMMGP--- 108
T + F +G + AP + P G + P + + P+P P ++ P
Sbjct: 672 TASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIP 731
Query: 109 ---PPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACP 145
P P + P G PG + + G P CP
Sbjct: 732 KSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECP 771
>gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]
Length = 463
Score = 53.5 bits (127), Expect = 7e-08
Identities = 50/164 (30%), Positives = 63/164 (38%), Gaps = 37/164 (22%)
Query: 21 RKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAM---- 76
+KT S +K +++ D Y A + QQG IPP PPV
Sbjct: 99 QKTQESQKKKQQDDSDEYDD-DDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP 157
Query: 77 --IPP-----PPSLPGPPH--PGMMPAPHMR----------------------GPAMMPM 105
IPP PP +PG P PGM P H + GP + P+
Sbjct: 158 PGIPPLMPGVPPLMPGMPPVMPGMPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPL 217
Query: 106 MGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVP 149
M PPGM P P PG+ P+ PG + RPPA VP
Sbjct: 218 MPGMPPGMPPPVPRPGIPPMTQAQAVSAPGI-LNRPPAPTATVP 260
Score = 51.6 bits (122), Expect = 3e-07
Identities = 43/137 (31%), Positives = 58/137 (42%), Gaps = 17/137 (12%)
Query: 31 KENVKDYYQKWMKEQAQSLIDKTTAA---FQQGKIPPAPFSAPPPVGAMIPPPPSLPGPP 87
++ ++ +K ++ + D +AA FQ + P PP +PP P PG P
Sbjct: 98 EQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP 157
Query: 88 HPGMMPAPHMRG-PAMMPMMGPPPPGMMPGGP----------APGMRPLMGGHRPMMPGS 136
PG+ P M G P +MP M P PGM PG + MGG P PG
Sbjct: 158 -PGIPPL--MPGVPPLMPGMPPVMPGMPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGI 214
Query: 137 PVIRPPACPMMVPTRPR 153
P + P P M P PR
Sbjct: 215 PPLMPGMPPGMPPPVPR 231
Score = 40.4 bits (93), Expect = 6e-04
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 34/86 (39%)
Query: 65 APFSAPP--PVGAMIPPPPSLPG--------PPH--------------PGMMPAPHMRGP 100
AP PP P+G M+PP P +P PPH PG MP P+ +GP
Sbjct: 377 APIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMP-PYGQGP 435
Query: 101 AMMPMM--GPP-------PPGMMPGG 117
M+P GPP PP M GG
Sbjct: 436 PMVPPYQGGPPRPPMGMRPPVMSQGG 461
Score = 27.7 bits (60), Expect = 4.1
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 103 MPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACP 145
+P G P G P GP GM P +P +P +RPP P
Sbjct: 371 LPRPGQAPIGNPPVGPIGGMMP----PQPGIPQQQGMRPPMPP 409
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 51.6 bits (122), Expect = 3e-07
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 64 PAPFSAPPPVGAMIPPPPSLPGP-------PHPGMMPAP---HMRGPAMMPMMGP---PP 110
P P S P P +P P +PGP P+PG +P P + GP P+ GP P
Sbjct: 188 PGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIPGPISGPN 247
Query: 111 PGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVP 149
PG++P GP PG P+ G PG P+I P P +P
Sbjct: 248 PGLIP-GPIPG--PISG------PG-PIIGPIPSPAQIP 276
Score = 47.8 bits (112), Expect = 4e-06
Identities = 40/110 (36%), Positives = 50/110 (45%), Gaps = 27/110 (24%)
Query: 64 PAPFSAPPPVGAMIPPP--PSLPGP-PHPGMMPAP-----------------HMRGPAMM 103
P P AP P A IP P S+PGP P P +P+P RGP
Sbjct: 96 PGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPG 155
Query: 104 PMMGPPP-PGMMPG---GPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVP 149
P+ GP P PG + G GP PG P+ G + +PG P+ P P+ VP
Sbjct: 156 PISGPAPIPGPISGPFSGPNPG--PIPGPNPGPIPG-PISGPIPGPISVP 202
Score = 44.7 bits (104), Expect = 3e-05
Identities = 34/93 (36%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 60 GKIP---PAPFSAPPPVGAMIPPPPSLPGPPH---PGMMPAP-HMRGPAMMPMMGP-PPP 111
G IP P P S P P+ IP P +PGP PG + +P MR P +P + P P
Sbjct: 249 GLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLPGLAPILGP 308
Query: 112 GMMPGG-------PAPGMRPLMGGHRPMMPGSP 137
G PG P PG P P+ P SP
Sbjct: 309 GSGPGSGSVPAPIPGPGSLP---APAPLWPQSP 338
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 51.2 bits (121), Expect = 3e-07
Identities = 35/96 (36%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 46 AQSLIDKTTAAFQQGKIPPAPFSAPPPV----GAMIPPPPSLPGPPHPGMMPAPHMRGPA 101
AQ+ + + Q P P SAP PV G+ +PPP G P PG P P
Sbjct: 197 AQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPP----GMPPPGSFPPP------ 246
Query: 102 MMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMPGSP 137
+P G PPG+ P P P M P GH P G+P
Sbjct: 247 -VPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTP 281
Score = 48.1 bits (113), Expect = 3e-06
Identities = 37/96 (38%), Positives = 43/96 (44%), Gaps = 22/96 (22%)
Query: 60 GKIPPAPFSAPPPVGAMIPPPPSLP--GPP------HPGMMPAPHMRGPAMMPMMGPPPP 111
G+ PP P PP + PPP +P GPP HPG MP MRG PPP
Sbjct: 331 GQPPPRP---PPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRG---------PPP 378
Query: 112 GMMPGGPAPGMRPLMGGHR--PMMPGSPVIRPPACP 145
M P G RP G++ P+ P P RPP P
Sbjct: 379 LMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPP 414
Score = 44.3 bits (103), Expect = 4e-05
Identities = 29/62 (46%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 85 GPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRPLMGGHRPMMP----GSPVIR 140
GPP G P P R P MP GPPP GM P GP G MG PM P G P +
Sbjct: 325 GPPGSGGQPPP--RPPPGMPHPGPPPMGMPPRGPPFGSP--MGHPGPMPPHGMRGPPPLM 380
Query: 141 PP 142
PP
Sbjct: 381 PP 382
Score = 43.9 bits (102), Expect = 6e-05
Identities = 39/104 (37%), Positives = 42/104 (40%), Gaps = 13/104 (12%)
Query: 60 GKIPPAPFSAP-PPVGAMIPPPPSLPGPPHPGMMPAPHMRGP--AMMPMMGPP------P 110
G PP F P PP GA+ PP P P P M P GP A P G P P
Sbjct: 236 GMPPPGSFPPPVPPPGAL--PPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHP 293
Query: 111 PGMMPGG-PAPGMRPL-MGGHRPMMPGSPVIRPPACPMMVPTRP 152
PGG P PGM + + H P G P PP P RP
Sbjct: 294 HPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRP 337
Score = 40.4 bits (93), Expect = 6e-04
Identities = 40/124 (32%), Positives = 46/124 (37%), Gaps = 44/124 (35%)
Query: 64 PAPFSAPPPVGAMIPPPPSLPGP----------------------PHP---GMMPAPHM- 97
P P + PP + +PPPP PG PHP G MP P M
Sbjct: 248 PPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMS 307
Query: 98 ------RGPAMM--PMMGPP------PPGMMPGGPAPGMRPLMGGHRPMMP--GSPVIRP 141
GP + P GPP PP PG P PG P+ G P P GSP+ P
Sbjct: 308 QMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPM--GMPPRGPPFGSPMGHP 365
Query: 142 PACP 145
P
Sbjct: 366 GPMP 369
Score = 32.0 bits (71), Expect = 0.22
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Query: 60 GKIPPAPFSAPPPV-------GAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPP 110
G +PP PPP+ G PPP P P P P P P+ GP P
Sbjct: 366 GPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGPLRGPLP 423
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 51.2 bits (121), Expect = 3e-07
Identities = 35/85 (41%), Positives = 40/85 (47%), Gaps = 15/85 (17%)
Query: 64 PAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMR 123
PAP + PPP PP PGPP G + + PA P +G PPPG PG P P
Sbjct: 672 PAPITVPPP-----QVPPHQPGPPVVGAL-----QPPAFTPPLGIPPPGFGPGVPPPPPP 721
Query: 124 P--LMGGHRPM-MPGSPVIRPPACP 145
P L G PM +P P PP P
Sbjct: 722 PPFLRPGFNPMHLP--PGFLPPGPP 744
Score = 45.4 bits (106), Expect = 2e-05
Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 59 QGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGP 118
QG P P ++ P L P MP PH++ +MP P PP MM GP
Sbjct: 810 QGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPR-PMPPHMMHRGP 868
Query: 119 APG-----MRPLMGGHRPMMPGSPVIRPPACP 145
PG M P G P P P +RP P
Sbjct: 869 PPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMP 900
Score = 43.9 bits (102), Expect = 6e-05
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 13/144 (9%)
Query: 11 TYLTHDS--PPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFS 68
TY+ D P ++ C G + + K + ++ ++ + + A P +P
Sbjct: 600 TYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIP 659
Query: 69 APPPVGAM---IPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGPPPPGMMPGGPAPGMRPL 125
P PV +P P ++P P P PH GP ++ + PP G P PG P
Sbjct: 660 KPLPVPVPPIPVPAPITVPPPQVP-----PHQPGPPVVGALQPPAFTPPLGIPPPGFGP- 713
Query: 126 MGGHRPMMPGSPVIRPPACPMMVP 149
G P P P +RP PM +P
Sbjct: 714 --GVPPPPPPPPFLRPGFNPMHLP 735
Score = 41.2 bits (95), Expect = 4e-04
Identities = 42/147 (28%), Positives = 58/147 (39%), Gaps = 25/147 (17%)
Query: 18 PPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPPVGAMI 77
PP +KT + D + ++E + T +PPAP + P A
Sbjct: 250 PPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPA 309
Query: 78 ---PPPPSLP-GPPHPGM-MPA-----------PHMRGPAMMPM---MGPPPPGMMPGG- 117
PPPP P G P GM PA P M G PM + PP G MPG
Sbjct: 310 AASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFG 369
Query: 118 --PAPGMRPLMGGHRPMMPGSPVIRPP 142
P P P+ +P++P +P ++ P
Sbjct: 370 LLPTPPFPPMA---QPVIPPTPPVQQP 393
Score = 38.1 bits (87), Expect = 0.003
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 19/102 (18%)
Query: 62 IPPAPFS--APPPVGAMIPPPPSL--PG--PPH--PGMMPAPHMRGPAMMPMMGPP---P 110
IPP F PPP PPPP PG P H PG +P P P P+ PP P
Sbjct: 706 IPPPGFGPGVPPP-----PPPPPFLRPGFNPMHLPPGFLP-PGPPPPITPPVSIPPPHTP 759
Query: 111 PGMMPGGPAPGMRPLMGGHRPMMPGSPVIRPPACPMMVPTRP 152
P +P + G M GS V PPA P +PT P
Sbjct: 760 PISIPNLVSGARGNAESGDSVKMYGSAV--PPAAPTNLPTPP 799
Score = 34.7 bits (78), Expect = 0.034
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 18/67 (26%)
Query: 62 IPPAPF-------SAPPPVGAMIPPPP---SLPGPPHPGMMPAPHMRGPAMMPMMGPPPP 111
+PP P PP G PPP P PPH P +R P MP +G P P
Sbjct: 854 MPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPH-----GPFVR-PGGMPGLGGPGP 907
Query: 112 GMMPGGP 118
G PGGP
Sbjct: 908 G--PGGP 912
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.478
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,227,403
Number of Sequences: 37866
Number of extensions: 924836
Number of successful extensions: 22881
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 1309
Number of HSP's that attempted gapping in prelim test: 6670
Number of HSP's gapped (non-prelim): 8652
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.