Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169162422
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169162422 PREDICTED: hypothetical protein [Homo sapiens]
(249 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169162422 PREDICTED: hypothetical protein [Homo sapiens] 503 e-143
gi|169161962 PREDICTED: hypothetical protein [Homo sapiens] 406 e-113
gi|169162723 PREDICTED: hypothetical protein [Homo sapiens] 406 e-113
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 37 0.016
gi|149944560 forkhead box D4-like 2 [Homo sapiens] 37 0.021
gi|187423902 forkhead box D4-like 5 [Homo sapiens] 37 0.021
gi|76880472 forkhead box D4-like 4 [Homo sapiens] 37 0.021
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens] 36 0.027
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens] 36 0.027
gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens] 35 0.047
gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens] 35 0.047
gi|231571314 nitric oxide synthase 3 isoform 2 [Homo sapiens] 35 0.047
gi|40254422 nitric oxide synthase 3 isoform 1 [Homo sapiens] 35 0.047
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens] 34 0.14
gi|54873613 agrin [Homo sapiens] 33 0.23
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 33 0.23
gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens] 33 0.23
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 33 0.23
gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens] 33 0.23
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 33 0.23
gi|153792074 proline rich 12 [Homo sapiens] 33 0.23
gi|4505835 polycystin 2 [Homo sapiens] 32 0.40
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 32 0.40
gi|64084766 fidgetin [Homo sapiens] 32 0.67
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 31 0.88
gi|4758532 ral guanine nucleotide dissociation stimulator-like 2... 31 0.88
gi|152963637 zinc finger protein 787 [Homo sapiens] 31 0.88
gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens] 31 1.2
gi|38490587 keratin associated protein 10-12 [Homo sapiens] 31 1.2
>gi|169162422 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 503 bits (1295), Expect = e-143
Identities = 249/249 (100%), Positives = 249/249 (100%)
Query: 1 MVASEKQKNCDVITGSGFFCCFTSQSLVYTVPEYGCGESLSLLKSLCSRTFPACQRPASS 60
MVASEKQKNCDVITGSGFFCCFTSQSLVYTVPEYGCGESLSLLKSLCSRTFPACQRPASS
Sbjct: 1 MVASEKQKNCDVITGSGFFCCFTSQSLVYTVPEYGCGESLSLLKSLCSRTFPACQRPASS 60
Query: 61 TSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRRLTRR 120
TSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRRLTRR
Sbjct: 61 TSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRRLTRR 120
Query: 121 SPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGLRLRKAKL 180
SPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGLRLRKAKL
Sbjct: 121 SPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGLRLRKAKL 180
Query: 181 FQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVGGIKCSEVEI 240
FQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVGGIKCSEVEI
Sbjct: 181 FQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIEQNVGGIKCSEVEI 240
Query: 241 TLKTGPLAL 249
TLKTGPLAL
Sbjct: 241 TLKTGPLAL 249
>gi|169161962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 258
Score = 406 bits (1043), Expect = e-113
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 48 SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS 107
SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS
Sbjct: 57 SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS 116
Query: 108 AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 167
AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS
Sbjct: 117 AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 176
Query: 168 CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE 227
CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE
Sbjct: 177 CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE 236
Query: 228 QNVGGIKCSEVEITLKTGPLAL 249
QNVGGIKCSEVEITLKTGPLAL
Sbjct: 237 QNVGGIKCSEVEITLKTGPLAL 258
>gi|169162723 PREDICTED: hypothetical protein [Homo sapiens]
Length = 258
Score = 406 bits (1043), Expect = e-113
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 48 SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS 107
SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS
Sbjct: 57 SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPS 116
Query: 108 AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 167
AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS
Sbjct: 117 AACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 176
Query: 168 CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE 227
CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE
Sbjct: 177 CELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKLDFPGSEGQFGIVIE 236
Query: 228 QNVGGIKCSEVEITLKTGPLAL 249
QNVGGIKCSEVEITLKTGPLAL
Sbjct: 237 QNVGGIKCSEVEITLKTGPLAL 258
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 38.5 bits (88), Expect = 0.006
Identities = 44/148 (29%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 56 RPASSTSPCAHQPMLSPLCKPLPT--PAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGH 113
RP S P Q +P +P PT PA +S+ PRL + + P A G
Sbjct: 193 RPKSQ--PPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGA 250
Query: 114 RRRLTRRS----PRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSCE 169
R +R P P G AA PG + G L P+ + +DA S C
Sbjct: 251 LSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCA 310
Query: 170 LRGLRLRKAKLFQEAAAAPLALSGCGER 197
G LR+ + ++ P A SG GER
Sbjct: 311 TVG--LRRGDCDRAGSSQPPATSGNGER 336
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 37.0 bits (84), Expect = 0.016
Identities = 42/163 (25%), Positives = 61/163 (37%), Gaps = 22/163 (13%)
Query: 51 FPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKY----QSSKYPRLAAPGSVAP 106
+P P SPC +P L+ PL + Y SK+P AA + A
Sbjct: 176 YPGSHYPEIVRSPC--KPPLNYETAPLQGNYVAFPSDPAYFRSLLCSKHPAAAAAAAAAA 233
Query: 107 SAACAGHRR----RLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDA 162
+AA A +++ P+P+ + G G PG S++ C A+D
Sbjct: 234 AAAAAAAAAAAYYQVSAAGPQPKAAAGAGG-----PGSLSYR-------CKRKRGGAKDC 281
Query: 163 LLRSSCELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQ 205
LL R L L +AAAA A + A G L+
Sbjct: 282 LLAPHAGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAGATCLE 324
>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
Length = 416
Score = 36.6 bits (83), Expect = 0.021
Identities = 38/137 (27%), Positives = 52/137 (37%), Gaps = 21/137 (15%)
Query: 3 ASEKQKNCDVITGSGFFCCFTSQSLVYTVPEYG--------CGESLSLLKSLCSRTFP-- 52
A +K + D+ T + F CC S LV ++ SLS L+ LC +
Sbjct: 281 APKKAEGADLATPAPFPCC--SPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERV 338
Query: 53 -----ACQRPASSTSPCAHQPMLSPLCKPLP----TPAITLLHSLKYQSSKYPRLAAPGS 103
C RP +T+ C+ + KPLP P LL SS R A +
Sbjct: 339 QGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAA 398
Query: 104 VAPSAACAGHRRRLTRR 120
+ P A C R RR
Sbjct: 399 LPPRARCWAGTCRPRRR 415
>gi|187423902 forkhead box D4-like 5 [Homo sapiens]
Length = 416
Score = 36.6 bits (83), Expect = 0.021
Identities = 38/137 (27%), Positives = 52/137 (37%), Gaps = 21/137 (15%)
Query: 3 ASEKQKNCDVITGSGFFCCFTSQSLVYTVPEYG--------CGESLSLLKSLCSRTFP-- 52
A +K + D+ T + F CC S LV ++ SLS L+ LC +
Sbjct: 281 APKKAEGADLATPAPFPCC--SPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERV 338
Query: 53 -----ACQRPASSTSPCAHQPMLSPLCKPLP----TPAITLLHSLKYQSSKYPRLAAPGS 103
C RP +T+ C+ + KPLP P LL SS R A +
Sbjct: 339 QGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAA 398
Query: 104 VAPSAACAGHRRRLTRR 120
+ P A C R RR
Sbjct: 399 LPPRARCWAGTCRPRRR 415
>gi|76880472 forkhead box D4-like 4 [Homo sapiens]
Length = 416
Score = 36.6 bits (83), Expect = 0.021
Identities = 38/137 (27%), Positives = 52/137 (37%), Gaps = 21/137 (15%)
Query: 3 ASEKQKNCDVITGSGFFCCFTSQSLVYTVPEYG--------CGESLSLLKSLCSRTFP-- 52
A +K + D+ T + F CC S LV ++ SLS L+ LC +
Sbjct: 281 APKKAEGADLATPAPFPCC--SPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERV 338
Query: 53 -----ACQRPASSTSPCAHQPMLSPLCKPLP----TPAITLLHSLKYQSSKYPRLAAPGS 103
C RP +T+ C+ + KPLP P LL SS R A +
Sbjct: 339 QGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAA 398
Query: 104 VAPSAACAGHRRRLTRR 120
+ P A C R RR
Sbjct: 399 LPPRARCWAGTCRPRRR 415
>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
Length = 922
Score = 36.2 bits (82), Expect = 0.027
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 57 PASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRR 116
P S +P A P P PTP TL S + S+ P + P S + SAA +
Sbjct: 347 PGPSATPTAATPT------PGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNS 400
Query: 117 LTRRS-------PRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 167
+ S P P S+G + G S+ G L G SP LSA L S+
Sbjct: 401 ASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGSTPSVAGPL-GVNSPLLSALKGFLTSN 457
>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
Length = 944
Score = 36.2 bits (82), Expect = 0.027
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 57 PASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACAGHRRR 116
P S +P A P P PTP TL S + S+ P + P S + SAA +
Sbjct: 369 PGPSATPTAATPT------PGPTPRSTLGSSEAFASTSAPFTSLPFSTSSSAASTSNPNS 422
Query: 117 LTRRS-------PRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALLRSS 167
+ S P P S+G + G S+ G L G SP LSA L S+
Sbjct: 423 ASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGSTPSVAGPL-GVNSPLLSALKGFLTSN 479
>gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens]
Length = 629
Score = 35.4 bits (80), Expect = 0.047
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 11/118 (9%)
Query: 36 CGESLSLLKSLCSRTFPACQRPASSTSPCA-------HQPMLSPLCKPLPTPAITLLHSL 88
CG L L LC + PA P S +P + H P SPL +P P + +
Sbjct: 15 CGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEGPKFPRVKNW 74
Query: 89 KYQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQER 146
+ S Y L+A C RR PRK +GR + P + Q R
Sbjct: 75 EVGSITYDTLSA--QAQQDGPCT--PRRCLGSLVFPRKLQGRPSPGPPAPEQLLSQAR 128
>gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens]
Length = 614
Score = 35.4 bits (80), Expect = 0.047
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 11/118 (9%)
Query: 36 CGESLSLLKSLCSRTFPACQRPASSTSPCA-------HQPMLSPLCKPLPTPAITLLHSL 88
CG L L LC + PA P S +P + H P SPL +P P + +
Sbjct: 15 CGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEGPKFPRVKNW 74
Query: 89 KYQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQER 146
+ S Y L+A C RR PRK +GR + P + Q R
Sbjct: 75 EVGSITYDTLSA--QAQQDGPCT--PRRCLGSLVFPRKLQGRPSPGPPAPEQLLSQAR 128
>gi|231571314 nitric oxide synthase 3 isoform 2 [Homo sapiens]
Length = 596
Score = 35.4 bits (80), Expect = 0.047
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 11/118 (9%)
Query: 36 CGESLSLLKSLCSRTFPACQRPASSTSPCA-------HQPMLSPLCKPLPTPAITLLHSL 88
CG L L LC + PA P S +P + H P SPL +P P + +
Sbjct: 15 CGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEGPKFPRVKNW 74
Query: 89 KYQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQER 146
+ S Y L+A C RR PRK +GR + P + Q R
Sbjct: 75 EVGSITYDTLSA--QAQQDGPCT--PRRCLGSLVFPRKLQGRPSPGPPAPEQLLSQAR 128
>gi|40254422 nitric oxide synthase 3 isoform 1 [Homo sapiens]
Length = 1203
Score = 35.4 bits (80), Expect = 0.047
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 11/118 (9%)
Query: 36 CGESLSLLKSLCSRTFPACQRPASSTSPCA-------HQPMLSPLCKPLPTPAITLLHSL 88
CG L L LC + PA P S +P + H P SPL +P P + +
Sbjct: 15 CGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEGPKFPRVKNW 74
Query: 89 KYQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQER 146
+ S Y L+A C RR PRK +GR + P + Q R
Sbjct: 75 EVGSITYDTLSA--QAQQDGPCT--PRRCLGSLVFPRKLQGRPSPGPPAPEQLLSQAR 128
>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
Length = 340
Score = 33.9 bits (76), Expect = 0.14
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 10/131 (7%)
Query: 52 PACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAACA 111
P P +S A +P L P A L ++L + P + PG V CA
Sbjct: 37 PGPAPPGGGSSDAAGKPPAGALGTPAAAAANELNNNLPGGAPAAPAVPGPGGVN----CA 92
Query: 112 GHRRRLTRRSPRPRKSRGR---GAANACLPGKSSHQERGVLVGCPSPALSARDALLRSSC 168
LTR +P PR+S +A+A P + +E G P S+ + +
Sbjct: 93 VGSAMLTRAAPGPRRSEDEPPAASASAAPPPQRDEEEPD---GVPEKGKSSGPSARKGKG 149
Query: 169 ELRGLRLRKAK 179
++ +LR+ +
Sbjct: 150 QIEKRKLREKR 160
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 33.1 bits (74), Expect = 0.23
Identities = 36/169 (21%), Positives = 59/169 (34%), Gaps = 26/169 (15%)
Query: 45 SLCSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSV 104
+LC C P+ + QP+ P+ + +H+ +Q S + A P
Sbjct: 544 ALCEAETGRCVCPSECVALA--QPVCGSDGHTYPSECMLHVHACTHQISLHVASAGPCET 601
Query: 105 APSAACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGCPSPALSARDALL 164
A CA +A C+ + H P P +
Sbjct: 602 CGDAVCA---------------FGAVCSAGQCVCPRCEHPP-------PGPVCGSDGVTY 639
Query: 165 RSSCELRGLRLRKAKLFQEAAAAPLALSGCGERAGGRGALQDSVVSEKL 213
S+CELR + +EA A P + CG +GG G+ +D ++L
Sbjct: 640 GSACELREAACLQQTQIEEARAGPCEQAECG--SGGSGSGEDGDCEQEL 686
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 33.1 bits (74), Expect = 0.23
Identities = 44/197 (22%), Positives = 64/197 (32%), Gaps = 45/197 (22%)
Query: 47 CSRTFPACQRPASSTSPCAHQPMLSPL--------------------CKPLPTPAITLLH 86
C + A P S +P H+P +PL +P PA L
Sbjct: 1720 CIKRQRAAGNPGSLAAPIDHKPCSAPLEPKSQASRNQRWGAVRAAESLTAIPEPASPQLL 1779
Query: 87 SLKYQSSKYPRLAAPG------SVAPSAACAGHRRRLTRRSPRPRKSRGRGAAN------ 134
+S+ ++ G + P A+ + R T SP +K RG +
Sbjct: 1780 ETPIHASQIQKVEPAGRSRFTPELQPKASQSRKRSLATMDSPPHQKQPQRGEVSQKTVII 1839
Query: 135 -------ACLPGKSSHQERGVLVGCPSPALSARDALLRSSCELRGLRLRKAKLFQEAAAA 187
A PGK V P P RD + LR+ KL QE+ A
Sbjct: 1840 KEEEEDTAEKPGKEED------VVTPKPGKRKRDQAEEEPNRIPSRSLRRTKLNQESTAP 1893
Query: 188 PLALSGCGERAGGRGAL 204
+ +G + G R L
Sbjct: 1894 KVLFTGVVDARGERAVL 1910
>gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens]
Length = 166
Score = 33.1 bits (74), Expect = 0.23
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 30 TVPEYGCGESLSLLKSLCSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLK 89
TVP G +SL++++ SR C P + P L P L P L
Sbjct: 25 TVP----GVRVSLVRTMPSRCH--CHSPI-----LPNPPSLPPSLPTLIPPPFLLWGRFS 73
Query: 90 YQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANACLP-GKSSHQERGV 148
+ S+ P AP G R R R P P+ GRG+A CLP G+S V
Sbjct: 74 HSHSQTP--------APRIWAQGPRSRDAGRGPAPKGRGGRGSA-CCLPWGRSEVPGTPV 124
Query: 149 LVGCPSPALSARD 161
V PA +AR+
Sbjct: 125 RV----PAAAARE 133
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 33.1 bits (74), Expect = 0.23
Identities = 52/149 (34%), Positives = 63/149 (42%), Gaps = 27/149 (18%)
Query: 48 SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSL---------KYQSSKYPRL 98
SR +RPA+ S A QP PL + L A++L SL + S+ PRL
Sbjct: 239 SRGRGGAERPAARGS--AQQP---PLARLLLASAVSLAASLARSPPPLQPRLGSASPPRL 293
Query: 99 AAP--GSVAPSAACAGHR-RRLTRRSPR------PRK-SRGRGAANA-CLPGKSSHQERG 147
AAP GS APS + R RR RSP PR SRG A G + RG
Sbjct: 294 AAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRG 353
Query: 148 VLVGCP--SPALSARDALLRSSCELRGLR 174
GC SP + A A + E R R
Sbjct: 354 RRQGCALGSPPIPAGPAAPGRAGERRAAR 382
>gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens]
Length = 166
Score = 33.1 bits (74), Expect = 0.23
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 30 TVPEYGCGESLSLLKSLCSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLK 89
TVP G +SL++++ SR C P + P L P L P L
Sbjct: 25 TVP----GVRVSLVRTMPSRCH--CHSPI-----LPNPPSLPPSLPTLIPPPFLLWGRFS 73
Query: 90 YQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANACLP-GKSSHQERGV 148
+ S+ P AP G R R R P P+ GRG+A CLP G+S V
Sbjct: 74 HSHSQTP--------APRIWAQGPRSRDAGRGPAPKGRGGRGSA-CCLPWGRSEVPGTPV 124
Query: 149 LVGCPSPALSARD 161
V PA +AR+
Sbjct: 125 RV----PAAAARE 133
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 33.1 bits (74), Expect = 0.23
Identities = 52/149 (34%), Positives = 63/149 (42%), Gaps = 27/149 (18%)
Query: 48 SRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSL---------KYQSSKYPRL 98
SR +RPA+ S A QP PL + L A++L SL + S+ PRL
Sbjct: 239 SRGRGGAERPAARGS--AQQP---PLARLLLASAVSLAASLARSPPPLQPRLGSASPPRL 293
Query: 99 AAP--GSVAPSAACAGHR-RRLTRRSPR------PRK-SRGRGAANA-CLPGKSSHQERG 147
AAP GS APS + R RR RSP PR SRG A G + RG
Sbjct: 294 AAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRG 353
Query: 148 VLVGCP--SPALSARDALLRSSCELRGLR 174
GC SP + A A + E R R
Sbjct: 354 RRQGCALGSPPIPAGPAAPGRAGERRAAR 382
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 33.1 bits (74), Expect = 0.23
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 86 HSLKYQSSKYPRLAAPGSVAPSAACAGHRRR--LTRRSPRPRKSRGRGAANACLPGKSSH 143
H YQ+ P L+ P SV PS G + + T P P S G A +
Sbjct: 1295 HPPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGAL----EAA 1350
Query: 144 QERGVLVGCPSPALSARDALLRS 166
+ G+ +GCPSP + L R+
Sbjct: 1351 ESEGLGLGCPSPCKRLDEELKRN 1373
>gi|4505835 polycystin 2 [Homo sapiens]
Length = 968
Score = 32.3 bits (72), Expect = 0.40
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 148 VLVGCPSPALSARDALLRSSCELRGLRLRKAKLFQEAAAAPLA---------LSGCGERA 198
++ GC A+ A A CE RGL + ++ Q AA P A LS C +A
Sbjct: 29 LMAGCA--AVGASLAAPGGLCEQRGLEIEMQRIRQAAARDPPAGAAASPSPPLSSCSRQA 86
Query: 199 GGRGALQDSVVSEKLDFPGSEGQFGIVIEQNV 230
R E+ + G EG G+V+E +V
Sbjct: 87 WSRDNPGFEAEEEEEEVEGEEG--GMVVEMDV 116
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 32.3 bits (72), Expect = 0.40
Identities = 59/209 (28%), Positives = 76/209 (36%), Gaps = 41/209 (19%)
Query: 34 YGCGESLSLLKSLCSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSS 93
Y C E+L ++ C AC+R S P CK +P ++ +
Sbjct: 31 YNC-ETLGVVVRSCGILLRACRR--SLACPAVRG------CKREGSPGVS--------AQ 73
Query: 94 KYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANA-----CLPGKSSHQERGV 148
P P AP AA R+RL RR K G G A A PG+ G
Sbjct: 74 GGPLEGTPRPAAPGAAPRPRRQRLRRRR---AKVGGWGCARARGLDRRAPGEGGRSPGGG 130
Query: 149 LVGCPSP----ALSARDALLRSSCELRGLRLRKAKLFQEAAAAPL--ALSGCGERAGGRG 202
L PSP A+ A A R + RG R R+A P+ LS G GGRG
Sbjct: 131 LE--PSPGARGAVGAAPAAARHR-KPRG-RSRRAPQMPLRVLPPILPGLSRAGGATGGRG 186
Query: 203 ALQDSVVSEKLDFPGSEGQFGIVIEQNVG 231
+ + PG G G + VG
Sbjct: 187 ------LPGRRGLPGRSGLQGAAVPPPVG 209
>gi|64084766 fidgetin [Homo sapiens]
Length = 759
Score = 31.6 bits (70), Expect = 0.67
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 33 EYGCGESLSLLKSLCSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAI-------TLL 85
EY G + S L S S PA P+ SP +L P P P PA+ + L
Sbjct: 184 EYAPGYNGSYLHSTYSSQ-PAPALPSPHPSPLHSSGLLQPPPPPPPPPALVPGYNGTSNL 242
Query: 86 HSLKYQSSKYPRLAAPGS 103
S Y S+ YP A GS
Sbjct: 243 SSYSYPSASYPPQTAVGS 260
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 31.2 bits (69), Expect = 0.88
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 16/64 (25%)
Query: 52 PACQRPASSTS---PCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSA 108
PA PA++ + P A P + LC P A+ P A+P +VAP+A
Sbjct: 152 PAAGPPAAALAAVYPAAADPSAASLCAASPLAAV-------------PAAASPAAVAPAA 198
Query: 109 ACAG 112
C G
Sbjct: 199 VCPG 202
>gi|4758532 ral guanine nucleotide dissociation stimulator-like 2
[Homo sapiens]
Length = 777
Score = 31.2 bits (69), Expect = 0.88
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 53 ACQRPASS--TSPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAA- 109
+C RP++ +P P+L+ L + + P+++ L S S A P ++P A+
Sbjct: 548 SCDRPSTGGDEAPTTPAPLLTRLAQHMKWPSVSSLDSALESSPSLHSPADPSHLSPPASS 607
Query: 110 ---CAGHRRRLTRRSP 122
GHRR + SP
Sbjct: 608 PRPSRGHRRSASCGSP 623
>gi|152963637 zinc finger protein 787 [Homo sapiens]
Length = 382
Score = 31.2 bits (69), Expect = 0.88
Identities = 51/209 (24%), Positives = 77/209 (36%), Gaps = 33/209 (15%)
Query: 29 YTVPEYGCGESLSLLKSLCSRTFPACQRPASSTSPCAHQPMLSPLCKPLPTPAITLLHSL 88
YT P+ CG S + KSL S +P + P C + +L L
Sbjct: 150 YTCPD--CGRSFTQSKSLAKHR----------RSHSGLKPFVCPRCGRGFSQPKSLARHL 197
Query: 89 KYQSSKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGV 148
+ +P L+ PG A A + RR+ P ++ A G E +
Sbjct: 198 RL----HPELSGPGVAAKVLAAS------VRRAKGPEEAVAADGEIAIPVGDG---EGII 244
Query: 149 LVGCPSPALSARDALLRSSCELRGLRLRKAKLFQEAAAAPLALSGCGERAG-GRGAL--Q 205
+VG P +A A+ + + G R R+A A P CG+ G G G L Q
Sbjct: 245 VVGAPGEGAAAAAAMAGAGAKAAGPRSRRA-----PAPKPYVCLECGKGFGHGAGLLAHQ 299
Query: 206 DSVVSEKLDFPGSEGQFGIVIEQNVGGIK 234
+ + L G E I +E G ++
Sbjct: 300 RAQHGDGLGAAGGEEPAHICVECGEGFVQ 328
>gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]
Length = 2240
Score = 30.8 bits (68), Expect = 1.2
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 93 SKYPRLAAPGSVAPSAACAGHRRRLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLVGC 152
S++ + APGS+ P+A A RR +R+PRP R R A A P + G
Sbjct: 218 SRWSPVLAPGSLCPAAPGAQDPRR-GKRAPRPPLRRRRLPAAASAPAPVPRPSQPRRPGT 276
Query: 153 PSPALSARDALLRSSCELRGL 173
P S A L + GL
Sbjct: 277 PEAVASRAVAGLSPALPPGGL 297
>gi|38490587 keratin associated protein 10-12 [Homo sapiens]
Length = 245
Score = 30.8 bits (68), Expect = 1.2
Identities = 39/138 (28%), Positives = 52/138 (37%), Gaps = 22/138 (15%)
Query: 36 CGESLSLLKSLCSRTFPACQRPASSTSPCAHQPMLSPLCKPL-PTPAITLLHSL-KYQSS 93
CG S S C ++ +CQ +SPC + CKP+ P + SL QSS
Sbjct: 125 CGPS----SSCCQQS--SCQPACCISSPCQQSCCVPVCCKPICCVPVCSGASSLCCQQSS 178
Query: 94 KYPRLAAPGSVAPSAACAGHRR---RLTRRSPRPRKSRGRGAANACLPGKSSHQERGVLV 150
P PS++ + R R RR P P + C+P S G L
Sbjct: 179 CQPACCTTSCCRPSSSVSLLCRPVCRPARRVPVP---------SCCVPTSSCQPSCGRLA 229
Query: 151 GCPSPALSARDALLRSSC 168
C S L R R +C
Sbjct: 230 SCGS--LLCRPTCSRLAC 245
Score = 28.1 bits (61), Expect = 7.5
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 30/109 (27%)
Query: 2 VASEKQKNCDVITGSGFFCCFTSQSLVYTVPEYGCGESLSLLKSLCSRTFPACQRPASST 61
++S Q++C V CC VP SL +S C PAC +T
Sbjct: 143 ISSPCQQSCCVPVCCKPICC---------VPVCSGASSLCCQQSSCQ---PAC----CTT 186
Query: 62 SPCAHQPMLSPLCKPLPTPAITLLHSLKYQSSKYPRLAAPGSVAPSAAC 110
S C +S LC+P+ PA R+ P P+++C
Sbjct: 187 SCCRPSSSVSLLCRPVCRPA--------------RRVPVPSCCVPTSSC 221
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,862,442
Number of Sequences: 37866
Number of extensions: 560171
Number of successful extensions: 2421
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 2337
Number of HSP's gapped (non-prelim): 206
length of query: 249
length of database: 18,247,518
effective HSP length: 100
effective length of query: 149
effective length of database: 14,460,918
effective search space: 2154676782
effective search space used: 2154676782
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.