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Search of human proteins with 167860114
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|167860114 jumonji domain containing 7 [Homo sapiens]
(316 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|167860114 jumonji domain containing 7 [Homo sapiens] 663 0.0
gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens] 490 e-139
gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens] 94 1e-19
gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens] 94 1e-19
gi|21314714 Hspb associated protein 1 [Homo sapiens] 66 4e-11
gi|89242134 hypothetical protein LOC129450 [Homo sapiens] 63 3e-10
gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor... 60 3e-09
gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens] 43 3e-04
gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens] 43 3e-04
gi|90093355 jumonji C domain containing histone demethylase 1 ho... 39 0.006
gi|56090146 jumonji domain containing 8 [Homo sapiens] 36 0.051
gi|32698700 PHD finger protein 8 [Homo sapiens] 34 0.19
gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens] 33 0.25
gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens] 33 0.25
gi|4885457 mothers against decapentaplegic homolog 4 [Homo sapiens] 31 1.6
gi|70167032 adenosine deaminase, RNA-specific isoform c [Homo sa... 28 8.2
gi|70166944 adenosine deaminase, RNA-specific isoform b [Homo sa... 28 8.2
gi|70166852 adenosine deaminase, RNA-specific isoform a [Homo sa... 28 8.2
gi|26190614 rhotekin 2 [Homo sapiens] 28 8.2
>gi|167860114 jumonji domain containing 7 [Homo sapiens]
Length = 316
Score = 663 bits (1711), Expect = 0.0
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 60
MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH
Sbjct: 1 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 60
Query: 61 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 120
WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA
Sbjct: 61 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 120
Query: 121 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 180
QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD
Sbjct: 121 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 180
Query: 181 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL 240
HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL
Sbjct: 181 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL 240
Query: 241 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY 300
DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY
Sbjct: 241 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY 300
Query: 301 SYFQLLDSLTKASGLD 316
SYFQLLDSLTKASGLD
Sbjct: 301 SYFQLLDSLTKASGLD 316
>gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens]
Length = 1012
Score = 490 bits (1262), Expect = e-139
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 1 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 60
MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH
Sbjct: 1 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 60
Query: 61 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 120
WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA
Sbjct: 61 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 120
Query: 121 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 180
QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD
Sbjct: 121 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 180
Query: 181 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEK 234
HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEK
Sbjct: 181 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEK 234
>gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]
Length = 454
Score = 94.4 bits (233), Expect = 1e-19
Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 34/265 (12%)
Query: 29 VPYLDKPPTPLHFYRDWVCPNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPD 88
VP L +P HF ++ P RP I++ HWP +QKWSL Y + G V V V
Sbjct: 222 VPRLHRPSLQ-HFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEV-GS 279
Query: 89 GYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLES 148
Y D M E F+ + + G L Q Q L ++P+L D+ S
Sbjct: 280 RYTDEEWSQTLMTVNE------FISKYIVNEPRDVGYL-AQHQ---LFDQIPELKQDI-S 328
Query: 149 HVPWASEALGKMPD-AVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIP 207
+ S G+ + +N W G ++ LH+D +N V G K+
Sbjct: 329 IPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYI------------ 376
Query: 208 YELYTPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGE 267
LY+P E G D + + ++ PDL ++P +++A L C + GE
Sbjct: 377 -RLYSP-----QESGALYPHDTHLLHNTSQVDVE--NPDLEKFPKFAKAPFLSCILSPGE 428
Query: 268 MLYLPALWFHHVQQSQGCIAVNFWY 292
+L++P ++H+V+ +V+FW+
Sbjct: 429 ILFIPVKYWHYVRALDLSFSVSFWW 453
>gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]
Length = 416
Score = 94.4 bits (233), Expect = 1e-19
Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 34/265 (12%)
Query: 29 VPYLDKPPTPLHFYRDWVCPNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPD 88
VP L +P HF ++ P RP I++ HWP +QKWSL Y + G V V V
Sbjct: 184 VPRLHRPSLQ-HFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEV-GS 241
Query: 89 GYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLES 148
Y D M E F+ + + G L Q Q L ++P+L D+ S
Sbjct: 242 RYTDEEWSQTLMTVNE------FISKYIVNEPRDVGYL-AQHQ---LFDQIPELKQDI-S 290
Query: 149 HVPWASEALGKMPD-AVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIP 207
+ S G+ + +N W G ++ LH+D +N V G K+
Sbjct: 291 IPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYI------------ 338
Query: 208 YELYTPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGE 267
LY+P E G D + + ++ PDL ++P +++A L C + GE
Sbjct: 339 -RLYSP-----QESGALYPHDTHLLHNTSQVDVE--NPDLEKFPKFAKAPFLSCILSPGE 390
Query: 268 MLYLPALWFHHVQQSQGCIAVNFWY 292
+L++P ++H+V+ +V+FW+
Sbjct: 391 ILFIPVKYWHYVRALDLSFSVSFWW 415
>gi|21314714 Hspb associated protein 1 [Homo sapiens]
Length = 488
Score = 66.2 bits (160), Expect = 4e-11
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 145 DLESHVPWASEAL-GKMPDAVNFWLGEAAAVTSLHKDHYE-NLYCVVSGEKHFLFHPPSD 202
DL V W+ G+ W+G A T H D Y NL V G K + PP D
Sbjct: 141 DLFQDVKWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPED 200
Query: 203 RPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCT 262
PF+ P E F ++ + PDL R+P + +AQ T
Sbjct: 201 TPFL-----YPTRIPYEESSVFSKINV-------------VNPDLKRFPQFRKAQRHAVT 242
Query: 263 VRAGEMLYLPALWFHHVQQ-SQGCIAVNFWYDMEYD 297
+ G++L++P W+H+V+ +++N W ++E D
Sbjct: 243 LSPGQVLFVPRHWWHYVESIDPVTVSINSWIELEED 278
>gi|89242134 hypothetical protein LOC129450 [Homo sapiens]
Length = 315
Score = 63.2 bits (152), Expect = 3e-10
Identities = 60/261 (22%), Positives = 97/261 (37%), Gaps = 52/261 (19%)
Query: 48 PNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRG---------DR 98
P R ++ + P KW++ Y G EV + V D + D+
Sbjct: 25 PQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVAQMDFISKNFVYRTLPFDQ 84
Query: 99 FMMPAERRLPLSFVLDVLE-------GRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVP 151
+ A F + E G V ++KQ L ++ P+
Sbjct: 85 LVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIK--FPEFFKEEQ 142
Query: 152 WASEALGKMPDAVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIPYELY 211
+ S + W H D +NL V+G+K + P D + LY
Sbjct: 143 FFSSVFRISSPGLQLWT---------HYDVMDNLLIQVTGKKRVVLFSPRDAQY----LY 189
Query: 212 TPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYL 271
T K + +D PDLA+YP +S+A+ C++ AG++L++
Sbjct: 190 LKGT------------------KSEVLNIDN--PDLAKYPLFSKARRYECSLEAGDVLFI 229
Query: 272 PALWFHHVQQSQGCIAVN-FW 291
PALWFH+V + + VN FW
Sbjct: 230 PALWFHNVISEEFGVGVNIFW 250
>gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor
[Homo sapiens]
Length = 349
Score = 60.1 bits (144), Expect = 3e-09
Identities = 65/274 (23%), Positives = 108/274 (39%), Gaps = 48/274 (17%)
Query: 51 PCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDG---YADAVRGDRFM--MPAER 105
P ++ + +PAL KW L Y + +G+ + SV Y D + F P
Sbjct: 61 PVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSN 119
Query: 106 RLPLSF--VLDVLEGRAQHPGV--LYVQKQCSNLPSELPQLLPD-LESHVPWASEALGKM 160
R + F ++ L+ Q G LY+Q+ ++ +++ D L + W ++ GK
Sbjct: 120 REEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGR--KIVMDFLGFNWNWINKQQGKR 177
Query: 161 P----DAVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFI-PYELYTPAT 215
+ +G VT H D +N + + G K + PP + PY ++ P
Sbjct: 178 GWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCD 237
Query: 216 YQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALW 275
Q +D PD R+P++ V G++LY+P W
Sbjct: 238 RQSQ--------------------VDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYW 277
Query: 276 FHHVQQSQG---CIAVNFWYD-------MEYDLK 299
+HH++ I VNFWY +EY LK
Sbjct: 278 WHHIESLLNGGITITVNFWYKGAPTPKRIEYPLK 311
>gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens]
Length = 447
Score = 43.1 bits (100), Expect = 3e-04
Identities = 62/271 (22%), Positives = 104/271 (38%), Gaps = 55/271 (20%)
Query: 41 FYRDWVCPNRPCIIRNAL-QHWPALQKWSLPYFRATVGST-----EVSVAVTPDGYADAV 94
F R ++ PN PC+ +A Q W + ++W P R +V V V G +
Sbjct: 90 FVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGVQEYN 149
Query: 95 RGDRFMMPAERRLPLSFVLDVLEGRAQHP-GVLYVQKQ--CSNLPSELPQLLPDLESHVP 151
+ M R +++ + ++ P G LY++ C + P E LP V
Sbjct: 150 SNPKEHMTL--RDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFPVEDVFTLP-----VY 202
Query: 152 WASEALGKMPDAVNF------WLGEAAAVTSLHKDHYENLYCVVS--GEKHFLFHPPSDR 203
++S+ L + DA++ + G A + + H D + + V+ G K +L PP
Sbjct: 203 FSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQ- 261
Query: 204 PFIPYELYTPATYQLTEEGTFKVVDEEAME----KVPWIPLDPLAPDLARYPSYSQA-QA 258
EEA+ +P+ P D +P A
Sbjct: 262 -------------------------EEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPP 296
Query: 259 LRCTVRAGEMLYLPALWFHHVQQSQGCIAVN 289
L T AGEM+++P+ W H V I++N
Sbjct: 297 LEITQEAGEMVFVPSGWHHQVHNLDDTISIN 327
>gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens]
Length = 463
Score = 43.1 bits (100), Expect = 3e-04
Identities = 62/271 (22%), Positives = 104/271 (38%), Gaps = 55/271 (20%)
Query: 41 FYRDWVCPNRPCIIRNAL-QHWPALQKWSLPYFRATVGST-----EVSVAVTPDGYADAV 94
F R ++ PN PC+ +A Q W + ++W P R +V V V G +
Sbjct: 90 FVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGVQEYN 149
Query: 95 RGDRFMMPAERRLPLSFVLDVLEGRAQHP-GVLYVQKQ--CSNLPSELPQLLPDLESHVP 151
+ M R +++ + ++ P G LY++ C + P E LP V
Sbjct: 150 SNPKEHMTL--RDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFPVEDVFTLP-----VY 202
Query: 152 WASEALGKMPDAVNF------WLGEAAAVTSLHKDHYENLYCVVS--GEKHFLFHPPSDR 203
++S+ L + DA++ + G A + + H D + + V+ G K +L PP
Sbjct: 203 FSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQ- 261
Query: 204 PFIPYELYTPATYQLTEEGTFKVVDEEAME----KVPWIPLDPLAPDLARYPSYSQA-QA 258
EEA+ +P+ P D +P A
Sbjct: 262 -------------------------EEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPP 296
Query: 259 LRCTVRAGEMLYLPALWFHHVQQSQGCIAVN 289
L T AGEM+++P+ W H V I++N
Sbjct: 297 LEITQEAGEMVFVPSGWHHQVHNLDDTISIN 327
>gi|90093355 jumonji C domain containing histone demethylase 1
homolog D [Homo sapiens]
Length = 941
Score = 38.9 bits (89), Expect = 0.006
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 233 EKVPWIPLDPLAPDLARYPSYSQA-------------QALRCTVRAGEMLYLPALWFHHV 279
EK+ ++ + P +LARY S+S + + +C V+ G L++P W H V
Sbjct: 298 EKIFYL-IKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAV 356
Query: 280 QQSQGCIAV--NFWYDMEYDLKYSYFQL 305
SQ C+A NF +++ ++ +++
Sbjct: 357 LTSQDCMAFGGNFLHNLNIGMQLRCYEM 384
>gi|56090146 jumonji domain containing 8 [Homo sapiens]
Length = 285
Score = 35.8 bits (81), Expect = 0.051
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 250 YPSYS-QAQALRCTVRAGEMLYLPALWFH 277
YP+ A+ L CT+RAGE+LY P W+H
Sbjct: 241 YPALPPSARPLECTIRAGEVLYFPDRWWH 269
>gi|32698700 PHD finger protein 8 [Homo sapiens]
Length = 1024
Score = 33.9 bits (76), Expect = 0.19
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 260 RCTVRAGEMLYLPALWFHHVQQSQGCIAV--NFWYDMEYDLKYSYFQLLDSLTKA 312
+C+V+ G+ L++P W H V C+A NF + + +++ +++ L+ A
Sbjct: 302 KCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTA 356
>gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]
Length = 414
Score = 33.5 bits (75), Expect = 0.25
Identities = 51/245 (20%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 48 PNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFM--MPAER 105
P +P ++ NA + W A +KW+L + + + DGY+ ++ ++ M + R
Sbjct: 66 PYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYMESTR 125
Query: 106 RLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVN 165
++ D G +HP +++ ++P+ D +A E + P
Sbjct: 126 DDSPLYIFDSSYG--EHP-----KRRKLLEDYKVPKFFTD--DLFQYAGEK--RRPPYRW 174
Query: 166 FWLGEAAAVTSLHKDHY--ENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGT 223
F +G + T +H D +V G K + P S P EL +EG
Sbjct: 175 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTS----TPRELIKVT----RDEG- 225
Query: 224 FKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQ 283
+ E + W + L +P + + L + GE +++P W+H V
Sbjct: 226 ----GNQQDEAITWFNVIYPRTQLPTWP--PEFKPLEILQKPGETVFVPGGWWHVVLNLD 279
Query: 284 GCIAV 288
IA+
Sbjct: 280 TTIAI 284
>gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]
Length = 403
Score = 33.5 bits (75), Expect = 0.25
Identities = 51/245 (20%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 48 PNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFM--MPAER 105
P +P ++ NA + W A +KW+L + + + DGY+ ++ ++ M + R
Sbjct: 66 PYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYMESTR 125
Query: 106 RLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVN 165
++ D G +HP +++ ++P+ D +A E + P
Sbjct: 126 DDSPLYIFDSSYG--EHP-----KRRKLLEDYKVPKFFTD--DLFQYAGEK--RRPPYRW 174
Query: 166 FWLGEAAAVTSLHKDHY--ENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGT 223
F +G + T +H D +V G K + P S P EL +EG
Sbjct: 175 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTS----TPRELIKVT----RDEG- 225
Query: 224 FKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQ 283
+ E + W + L +P + + L + GE +++P W+H V
Sbjct: 226 ----GNQQDEAITWFNVIYPRTQLPTWP--PEFKPLEILQKPGETVFVPGGWWHVVLNLD 279
Query: 284 GCIAV 288
IA+
Sbjct: 280 TTIAI 284
>gi|4885457 mothers against decapentaplegic homolog 4 [Homo sapiens]
Length = 552
Score = 30.8 bits (68), Expect = 1.6
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 35 PPTPLHFYRDWVCPNRPCIIRNALQHWPALQKW-SLPYFRATVGSTEVSVA------VTP 87
PP P H W N + + + PA + W S+ YF V E VT
Sbjct: 292 PPMPPHPGHYWPVHNE-LAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTV 350
Query: 88 DGYADAVRGDRFMM 101
DGY D GDRF +
Sbjct: 351 DGYVDPSGGDRFCL 364
>gi|70167032 adenosine deaminase, RNA-specific isoform c [Homo
sapiens]
Length = 1181
Score = 28.5 bits (62), Expect = 8.2
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 98 RFMMPAERRLPLSFVLDVLEG-RAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEA 156
R+ P P SF+L +E + Q P + KQ +LP LP L P V AS
Sbjct: 26 RYQQPGPGSSPSSFLLKQIEFLKGQLPEAPVIGKQTPSLPPSLPGLRPRFP--VLLASST 83
Query: 157 LGKMPD 162
G+ D
Sbjct: 84 RGRQVD 89
>gi|70166944 adenosine deaminase, RNA-specific isoform b [Homo
sapiens]
Length = 1200
Score = 28.5 bits (62), Expect = 8.2
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 98 RFMMPAERRLPLSFVLDVLEG-RAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEA 156
R+ P P SF+L +E + Q P + KQ +LP LP L P V AS
Sbjct: 26 RYQQPGPGSSPSSFLLKQIEFLKGQLPEAPVIGKQTPSLPPSLPGLRPRFP--VLLASST 83
Query: 157 LGKMPD 162
G+ D
Sbjct: 84 RGRQVD 89
>gi|70166852 adenosine deaminase, RNA-specific isoform a [Homo
sapiens]
Length = 1226
Score = 28.5 bits (62), Expect = 8.2
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 98 RFMMPAERRLPLSFVLDVLEG-RAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEA 156
R+ P P SF+L +E + Q P + KQ +LP LP L P V AS
Sbjct: 26 RYQQPGPGSSPSSFLLKQIEFLKGQLPEAPVIGKQTPSLPPSLPGLRPRFP--VLLASST 83
Query: 157 LGKMPD 162
G+ D
Sbjct: 84 RGRQVD 89
>gi|26190614 rhotekin 2 [Homo sapiens]
Length = 609
Score = 28.5 bits (62), Expect = 8.2
Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 182 YENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKV-PWIPL 240
+ LYCV+ G K + F+ P + I ++ + +E + +D++A +++ + +
Sbjct: 305 WRRLYCVLRGGKLYCFYSPEE---IEAKVEPALVVPINKETRIRAMDKDAKKRIHNFSVI 361
Query: 241 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQ 283
+P+ P + Q R ++ A W H SQ
Sbjct: 362 NPV-------PGQAITQIFAVDNREDLQKWMEAFWQHFFDLSQ 397
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,165,321
Number of Sequences: 37866
Number of extensions: 614851
Number of successful extensions: 1286
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1258
Number of HSP's gapped (non-prelim): 21
length of query: 316
length of database: 18,247,518
effective HSP length: 102
effective length of query: 214
effective length of database: 14,385,186
effective search space: 3078429804
effective search space used: 3078429804
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.