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Search of human proteins with 110578655
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|110578655 Zwilch [Homo sapiens]
(591 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|110578655 Zwilch [Homo sapiens] 1185 0.0
gi|156104893 ArfGAP with GTPase domain, ankyrin repeat and PH do... 35 0.15
gi|166851846 centaurin, gamma-like family, member 3 [Homo sapiens] 34 0.43
gi|117956371 ArfGAP with GTPase domain, ankyrin repeat and PH do... 34 0.43
gi|221136914 ArfGAP with GTPase domain, ankyrin repeat and PH do... 33 0.74
gi|40018627 MAP kinase-interacting serine/threonine kinase 2 iso... 33 0.74
gi|239744074 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... 33 0.96
gi|239744064 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... 33 0.96
gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens] 32 1.3
gi|71061468 centromere protein E [Homo sapiens] 32 1.6
gi|217330641 IWS1 homolog [Homo sapiens] 32 1.6
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 31 2.8
gi|114155144 tropomyosin 3 isoform 4 [Homo sapiens] 30 4.8
gi|11141889 WW45 protein [Homo sapiens] 30 6.2
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 30 6.2
gi|52426761 gamma-aminobutyric acid (GABA) A receptor, epsilon p... 30 6.2
gi|29029632 anaplastic lymphoma kinase [Homo sapiens] 30 8.1
gi|33946313 ninein isoform 4 [Homo sapiens] 30 8.1
gi|33946321 ninein isoform 5 [Homo sapiens] 30 8.1
gi|148536871 ninein isoform 1 [Homo sapiens] 30 8.1
gi|148536869 ninein isoform 2 [Homo sapiens] 30 8.1
>gi|110578655 Zwilch [Homo sapiens]
Length = 591
Score = 1185 bits (3065), Expect = 0.0
Identities = 591/591 (100%), Positives = 591/591 (100%)
Query: 1 MWERLNCAAEDFYSRLLQKFNEEKKGIRKDPFLYEADVQVQLISKGQPNPLKNILNENDI 60
MWERLNCAAEDFYSRLLQKFNEEKKGIRKDPFLYEADVQVQLISKGQPNPLKNILNENDI
Sbjct: 1 MWERLNCAAEDFYSRLLQKFNEEKKGIRKDPFLYEADVQVQLISKGQPNPLKNILNENDI 60
Query: 61 VFIVEKVPLEKEETSHIEELQSEETAISDFSTGENVGPLALPVGKARQLIGLYTMAHNPN 120
VFIVEKVPLEKEETSHIEELQSEETAISDFSTGENVGPLALPVGKARQLIGLYTMAHNPN
Sbjct: 61 VFIVEKVPLEKEETSHIEELQSEETAISDFSTGENVGPLALPVGKARQLIGLYTMAHNPN 120
Query: 121 MTHLKINLPVTALPPLWVRCDSSDPEGTCWLGAELITTNNSITGIVLYVVSCKADKNYSV 180
MTHLKINLPVTALPPLWVRCDSSDPEGTCWLGAELITTNNSITGIVLYVVSCKADKNYSV
Sbjct: 121 MTHLKINLPVTALPPLWVRCDSSDPEGTCWLGAELITTNNSITGIVLYVVSCKADKNYSV 180
Query: 181 NLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPVDEILQI 240
NLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPVDEILQI
Sbjct: 181 NLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPVDEILQI 240
Query: 241 PPLSSTATLNIKVESGEPRGPLNHLYRELKFLLVLADGLRTGVTEWLEPLEAKSAVELVQ 300
PPLSSTATLNIKVESGEPRGPLNHLYRELKFLLVLADGLRTGVTEWLEPLEAKSAVELVQ
Sbjct: 241 PPLSSTATLNIKVESGEPRGPLNHLYRELKFLLVLADGLRTGVTEWLEPLEAKSAVELVQ 300
Query: 301 EFLNDLNKLDGFGDSTKKDTEVETLKHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSV 360
EFLNDLNKLDGFGDSTKKDTEVETLKHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSV
Sbjct: 301 EFLNDLNKLDGFGDSTKKDTEVETLKHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSV 360
Query: 361 ISYQDLVKCFTLIIQSLQRGDIQPWLHSGSNSLLSKLIHQSYHGTMDTVSLSGTIPVQML 420
ISYQDLVKCFTLIIQSLQRGDIQPWLHSGSNSLLSKLIHQSYHGTMDTVSLSGTIPVQML
Sbjct: 361 ISYQDLVKCFTLIIQSLQRGDIQPWLHSGSNSLLSKLIHQSYHGTMDTVSLSGTIPVQML 420
Query: 421 LEIGLDKLKKDYISFFIGQELASLNHLEYFIAPSVDIQEQVYRVQKLHHILEILVSCMPF 480
LEIGLDKLKKDYISFFIGQELASLNHLEYFIAPSVDIQEQVYRVQKLHHILEILVSCMPF
Sbjct: 421 LEIGLDKLKKDYISFFIGQELASLNHLEYFIAPSVDIQEQVYRVQKLHHILEILVSCMPF 480
Query: 481 IKSQHELLFSLTQICIKYYKQNPLDEQHIFQLPVRPTAVKNLYQSEKPQKWRVEIYSGQK 540
IKSQHELLFSLTQICIKYYKQNPLDEQHIFQLPVRPTAVKNLYQSEKPQKWRVEIYSGQK
Sbjct: 481 IKSQHELLFSLTQICIKYYKQNPLDEQHIFQLPVRPTAVKNLYQSEKPQKWRVEIYSGQK 540
Query: 541 KIKTVWQLSDSSPIDHLNFHKPDFSELTLNGSLEERIFFTNMVTCSQVHFK 591
KIKTVWQLSDSSPIDHLNFHKPDFSELTLNGSLEERIFFTNMVTCSQVHFK
Sbjct: 541 KIKTVWQLSDSSPIDHLNFHKPDFSELTLNGSLEERIFFTNMVTCSQVHFK 591
>gi|156104893 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 4 [Homo sapiens]
Length = 663
Score = 35.4 bits (80), Expect = 0.15
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 178 YSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPVDEI 237
YS + +KN+HKK L T T K ++ +SA T+ ++ D+ D I
Sbjct: 293 YSSLGDYMKNIHKKEIDLQTSTIKVPGKWPSLATSACTPISTSKSNGLSKDMDTGLGDSI 352
Query: 238 LQIPPLSSTATLNIKVESGEPRGPLNHLYREL--KFLLVLADG 278
P +SST + + HL ++ F++V A G
Sbjct: 353 CFSPSISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATG 395
>gi|166851846 centaurin, gamma-like family, member 3 [Homo sapiens]
Length = 686
Score = 33.9 bits (76), Expect = 0.43
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 178 YSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPVDEI 237
YS + +KN+HKK L T T K ++ +SA ++ ++ D+ D I
Sbjct: 316 YSSLGDYMKNIHKKEIDLQTSTIKVPGKWPSLATSACTPISSSKSNGLSKDMDTGLGDSI 375
Query: 238 LQIPPLSSTATLNIKVESGEPRGPLNHLYREL--KFLLVLADG 278
P +SST + + HL ++ F++V A G
Sbjct: 376 CFSPSISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATG 418
>gi|117956371 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 8 [Homo sapiens]
Length = 663
Score = 33.9 bits (76), Expect = 0.43
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 178 YSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPVDEI 237
YS + +KN+HKK L T T K ++ +SA ++ ++ D+ D I
Sbjct: 293 YSSLGDYMKNIHKKEIDLQTSTIKVPGKWPSLATSACTPISSSKSNGLSKDMDTGLGDSI 352
Query: 238 LQIPPLSSTATLNIKVESGEPRGPLNHLYREL--KFLLVLADG 278
P +SST + + HL ++ F++V A G
Sbjct: 353 CFSPSISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATG 395
>gi|221136914 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 5 [Homo sapiens]
Length = 686
Score = 33.1 bits (74), Expect = 0.74
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 178 YSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPVDEI 237
YS + +KN+HKK L T T K ++ +SA ++ ++ D+ D I
Sbjct: 316 YSSLGDYMKNIHKKEIDLRTSTIKVPGKWPSLATSACAPISSSKSNGLSKDMDTGLGDSI 375
Query: 238 LQIPPLSSTATLNIKVESGEPRGPLNHLYREL--KFLLVLADG 278
P +SST + + HL ++ F++V A G
Sbjct: 376 CFSPSISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATG 418
>gi|40018627 MAP kinase-interacting serine/threonine kinase 2
isoform 2 [Homo sapiens]
Length = 465
Score = 33.1 bits (74), Expect = 0.74
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 2 WERLNCAAEDFYSRLLQKFNEEKKGIRKDPFLYEADVQVQLISKGQPNPL---KNILNEN 58
W ++CAA+D S+LL + + K+ + L VQ P P+ +N ++
Sbjct: 334 WAHISCAAKDLISKLLVR--DAKQRLSAAQVLQHPWVQGCAPENTLPTPMVLQRNSCAKD 391
Query: 59 DIVFIVEKVPLEKEETSHIEELQSEETA 86
F E + + ++ H E+L EE A
Sbjct: 392 LTSFAAEAIAMNRQLAQHDEDLAEEEAA 419
>gi|239744074 PREDICTED: ArfGAP with GTPase domain, ankyrin repeat
and PH domain 9 [Homo sapiens]
Length = 684
Score = 32.7 bits (73), Expect = 0.96
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 178 YSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPVDEI 237
YS + +KN+HKK L T T K ++ +SA ++ ++ D+ D I
Sbjct: 316 YSSLGDYMKNIHKKEIDLRTSTIKVPGKWPSLATSACAPISSSKSNGLSKDMDTGLGDSI 375
Query: 238 LQIPPLSSTATLNIKVESGEPRGPLNHLYREL--KFLLVLADG 278
P +SST + + HL ++ F++V A G
Sbjct: 376 CFSPGISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATG 418
>gi|239744064 PREDICTED: ArfGAP with GTPase domain, ankyrin repeat
and PH domain 10 [Homo sapiens]
Length = 684
Score = 32.7 bits (73), Expect = 0.96
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 178 YSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPVDEI 237
YS + +KN+HKK L T T K ++ +SA ++ ++ D+ D I
Sbjct: 316 YSSLGDYMKNIHKKEIDLRTSTIKVPGKWPSLATSACAPISSSKSNGLSKDMDTGLGDSI 375
Query: 238 LQIPPLSSTATLNIKVESGEPRGPLNHLYREL--KFLLVLADG 278
P +SST + + HL ++ F++V A G
Sbjct: 376 CFSPGISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATG 418
>gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]
Length = 3661
Score = 32.3 bits (72), Expect = 1.3
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 33/164 (20%)
Query: 351 QLWCKMS-----SSVISYQD-LVKCFTLIIQSLQRGDIQPWLHS-----GSNSLLSKLIH 399
QL+C + S+ +S +D L+ F+ ++S ++ D++PW+ + N LL K+
Sbjct: 1353 QLYCSSALENTVSNRLSTEDCLIPLFSEALRSCKQHDVRPWMQALRYTMYQNQLLEKIKE 1412
Query: 400 QS----------------YHGTMDTVSLSGTIPVQML-LEIGLDKLKKDYISFFIGQELA 442
Q+ + VSL+ + Q +++G +D + F ++L+
Sbjct: 1413 QTVPIRSHLMELGLTAAKFARKRGNVSLATRLLAQCSEVQLGKTTTAQDLVQHF--KKLS 1470
Query: 443 SLNHLEYFIAPSVDIQEQ--VYRVQKLHHILEILVSC-MPFIKS 483
+ ++ P +DI++ +Y + H +E+L SC + F KS
Sbjct: 1471 TQGQVDEKWGPELDIEKTKLLYTAGQSTHAMEMLSSCAISFCKS 1514
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 32.0 bits (71), Expect = 1.6
Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 31/173 (17%)
Query: 175 DKNYSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPV 234
+ NY+ N+ K H LS + + +S +T+ +I W+P
Sbjct: 433 NSNYADQFNIPTNITTKTHKLSINLLREIDESVCSESDVFSNTLDTLS-----EIEWNPA 487
Query: 235 DEILQIPPLSSTATLNIKVESGEPRGPLNHLYRELKFLLVLADGLRTGVTEWLEPLEAKS 294
++L + S LN L + L++ + LRT K
Sbjct: 488 TKLLNQENIESE---------------LNSLRADYDNLVLDYEQLRT----------EKE 522
Query: 295 AVELVQEFLNDLNKLDGFGDSTKKDTEVETLKHDTAAVDRSVKRLFKVRSDLD 347
+EL + NDL++ + TKKD E++ L H+ + + VK DL+
Sbjct: 523 EMELKLKEKNDLDEFEALERKTKKDQEMQ-LIHEISNLKNLVKHAEVYNQDLE 574
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 32.0 bits (71), Expect = 1.6
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 16/81 (19%)
Query: 278 GLRTGVTEWLEPLEAKS--AVELVQEFLNDLNKLDGFGDSTKKDTEVETLKHDTAAVDRS 335
G+ + + EWL PL +S A+++ +E L L +L ETLKH + + R+
Sbjct: 611 GVMSAIKEWLSPLPDRSLPALKIREELLKILQELPSVSQ--------ETLKH--SGIGRA 660
Query: 336 VKRLFK----VRSDLDFAEQL 352
V L+K RS+ D A +L
Sbjct: 661 VMYLYKHPKESRSNKDMAGKL 681
>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
Length = 879
Score = 31.2 bits (69), Expect = 2.8
Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 17/89 (19%)
Query: 1 MWERLNCAAEDFYSRLLQKFNEEKKGIRKDPFLYEADVQVQLISKGQPNPLKNILNENDI 60
MW A + FY + K E+ K KD Y A KG+PN K
Sbjct: 806 MWNNTAAADKQFYEKKAAKLKEKYK---KDIAAYRA--------KGKPNSAKK------R 848
Query: 61 VFIVEKVPLEKEETSHIEELQSEETAISD 89
V EK +KEE E+ Q EE D
Sbjct: 849 VVKAEKSKKKKEEEEDEEDEQEEENEEDD 877
>gi|114155144 tropomyosin 3 isoform 4 [Homo sapiens]
Length = 248
Score = 30.4 bits (67), Expect = 4.8
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 266 YRELKFLLVLADGLRTGVTEWLEPLEAKSAVELVQEFLNDLNKLDGFGDSTKKDTEVETL 325
Y E+ LV+ +G E E E+K + EL +E N N L +K ++ E
Sbjct: 126 YEEVARKLVIIEGDLERTEERAELAESKCS-ELEEELKNVTNNLKSLEAQAEKYSQKEDK 184
Query: 326 KHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSVISYQDLVKC 369
+ + +L + + +FAE+ K+ ++ +D +KC
Sbjct: 185 YEEEIKI--LTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKC 226
>gi|11141889 WW45 protein [Homo sapiens]
Length = 383
Score = 30.0 bits (66), Expect = 6.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 113 YTMAHNPNMTHLKINLPVTALPPLWVRCDSSD 144
Y + HN N TH L LPP W R +SS+
Sbjct: 216 YYIDHNTNTTHWSHPLEREGLPPGWERVESSE 247
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 30.0 bits (66), Expect = 6.2
Identities = 41/209 (19%), Positives = 83/209 (39%), Gaps = 44/209 (21%)
Query: 157 TTNNSITGIVLYVVSCKADKNYSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDD 216
TT++ IT + L + S L L+ L K R H + Q ++++
Sbjct: 571 TTSSKITELQLKLESA---------LTELEQLRKSRQHQMQLVDSIVRQRDMYR------ 615
Query: 217 TITASQTAIALDISWSPVDEI-LQIPPLSSTATLNIKVESGEPRGPLNHLYRELKFLLVL 275
+ + T +A+ + S +D++ L P + + + + P
Sbjct: 616 ILLSQTTGVAIPLHASSLDDVSLASTPKRPSTSQTVSTPAPVP----------------- 658
Query: 276 ADGLRTGVTEWLEPLEAKSAVELVQEFLNDLNKLDGFGDSTKKDTEVETLKHDTAAVDRS 335
V E E +EAK+A++ +QE + K + + + ++E L+ + RS
Sbjct: 659 -------VIESTEAIEAKAALKQLQEIFENYKKEKAENEKIQNE-QLEKLQEQVTDL-RS 709
Query: 336 VKRLFKVRSDLDFAEQLWCKMSSSVISYQ 364
K+ + LDFA + + + +V Y+
Sbjct: 710 QNT--KISTQLDFASKRYEMLQDNVEGYR 736
>gi|52426761 gamma-aminobutyric acid (GABA) A receptor, epsilon
precursor [Homo sapiens]
Length = 506
Score = 30.0 bits (66), Expect = 6.2
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 11/96 (11%)
Query: 45 KGQPNPLKNILNENDIVFIVEKVPLEKEETSHIEELQSEETAISDFSTGENVGPLALPVG 104
+G KN + D+V+ + PLE + L SEET ++ TG VG L
Sbjct: 21 EGPQTESKNEASSRDVVYGPQPQPLENQ-------LLSEETKSTETETGSRVGKLPEASR 73
Query: 105 KARQLIGLYTMAHNPNM----THLKINLPVTALPPL 136
++ Y P + T + + + V +L PL
Sbjct: 74 ILNTILSNYDHKLRPGIGEKPTVVTVEISVNSLGPL 109
>gi|29029632 anaplastic lymphoma kinase [Homo sapiens]
Length = 1620
Score = 29.6 bits (65), Expect = 8.1
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 321 EVETLKHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSVISYQDLVKCFTLIIQSLQR 379
+V + +D + + +VK L +V S+ D + L + S ++Q++V+C + +QSL R
Sbjct: 1134 QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 1192
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 29.6 bits (65), Expect = 8.1
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 325 LKHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSV 360
++H VD+ V+ K+RSDLD AE+L M+S V
Sbjct: 375 IRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEV 410
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 29.6 bits (65), Expect = 8.1
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 325 LKHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSV 360
++H VD+ V+ K+RSDLD AE+L M+S V
Sbjct: 369 IRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEV 404
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 29.6 bits (65), Expect = 8.1
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 325 LKHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSV 360
++H VD+ V+ K+RSDLD AE+L M+S V
Sbjct: 369 IRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEV 404
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 29.6 bits (65), Expect = 8.1
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 325 LKHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSV 360
++H VD+ V+ K+RSDLD AE+L M+S V
Sbjct: 369 IRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEV 404
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,827,586
Number of Sequences: 37866
Number of extensions: 956325
Number of successful extensions: 2603
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2586
Number of HSP's gapped (non-prelim): 26
length of query: 591
length of database: 18,247,518
effective HSP length: 108
effective length of query: 483
effective length of database: 14,157,990
effective search space: 6838309170
effective search space used: 6838309170
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.