Guide to the Human Genome
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Name: ZWILCH Sequence: fasta or formatted (591aa) NCBI GI: 110578655
Description:

Zwilch

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         25           2
 C cysteine            1.5          9           1
 D aspartate           5.2         31           2
 E glutamate           7.3         43           2
 F phenylalanine       4.1         24           2
 G glycine             4.1         24           1
 H histidine           3.2         19           2
 I isoleucine          6.6         39           2
 K lysine              7.4         44           2
 L leucine            12.9         76           2
 M methionine          1.4          8           1
 N asparagine          4.6         27           2
 P proline             4.6         27           2
 Q glutamine           5.2         31           1
 R arginine            2.9         17           1
 S serine              8.6         51           3
 T threonine           5.6         33           2
 V valine              6.4         38           2
 W tryptophan          1.5          9           1
 Y tyrosine            2.7         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Zwilch 
AGAP4                 0.009   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP6                 0.008   centaurin, gamma-like family, member 3 
AGAP8                 0.008   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP5                 0.007   ArfGAP with GTPase domain, ankyrin repeat and PH do...
MKNK2                 0.007   MAP kinase-interacting serine/threonine kinase 2 iso...
AGAP9                 0.007   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.007   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
SMG1                  0.006   PI-3-kinase-related kinase SMG-1 
CENPE                 0.006   centromere protein E 
IWS1                  0.006   IWS1 homolog 
SP100                 0.005   nuclear antigen Sp100 isoform 2 
TPM3                  0.004   tropomyosin 3 isoform 4 
SAV1                  0.004   WW45 protein 
TPR                   0.004   nuclear pore complex-associated protein TPR 
GABRE                 0.004   gamma-aminobutyric acid (GABA) A receptor, epsilon p...
ALK                   0.004   anaplastic lymphoma kinase 
NIN                   0.004   ninein isoform 4 
NIN                   0.004   ninein isoform 5 
NIN                   0.004   ninein isoform 1 
NIN                   0.004   ninein isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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