Search of human proteins with 166197698

Search of human proteins with 166197698

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|166197698 alpha-1,3-mannosyl-glycoprotein
4-beta-N-acetylglucosaminyltransferase C [Homo sapiens]
         (478 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|166197698 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...   976   0.0  
gi|6912502 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...   229   5e-60
gi|237512959 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...   226   3e-59
gi|16915936 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluco...   211   1e-54
gi|7710152 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...   211   1e-54
gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]          118   1e-26
gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]          118   1e-26
gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]          118   1e-26
gi|188497703 semaphorin 3F [Homo sapiens]                              30   4.8  
gi|38569484 kinesin family member 21A [Homo sapiens]                   30   4.8  
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ...    30   6.3  
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ...    30   6.3  
gi|42476076 hypothetical protein LOC22878 [Homo sapiens]               30   6.3  
gi|163659918 sacsin [Homo sapiens]                                     29   8.2  
gi|148839305 structural maintenance of chromosomes flexible hing...    29   8.2  

>gi|166197698 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase C [Homo sapiens]
          Length = 478

 Score =  976 bits (2523), Expect = 0.0
 Identities = 478/478 (100%), Positives = 478/478 (100%)

Query: 1   MFKFHQMKHIFEILDKMRCLRKRSTVSFLGVLVIFLLFMNLYIEDSYVLEGDKQLIRETS 60
           MFKFHQMKHIFEILDKMRCLRKRSTVSFLGVLVIFLLFMNLYIEDSYVLEGDKQLIRETS
Sbjct: 1   MFKFHQMKHIFEILDKMRCLRKRSTVSFLGVLVIFLLFMNLYIEDSYVLEGDKQLIRETS 60

Query: 61  THQLNSERYVHTFKDLSNFSGAINVTYRYLAATPLQRKRYLTIGLSSVKRKKGNYLLETI 120
           THQLNSERYVHTFKDLSNFSGAINVTYRYLAATPLQRKRYLTIGLSSVKRKKGNYLLETI
Sbjct: 61  THQLNSERYVHTFKDLSNFSGAINVTYRYLAATPLQRKRYLTIGLSSVKRKKGNYLLETI 120

Query: 121 KSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKFAHHIIAGRLMVIHAPEEYYP 180
           KSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKFAHHIIAGRLMVIHAPEEYYP
Sbjct: 121 KSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKFAHHIIAGRLMVIHAPEEYYP 180

Query: 181 ILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYYVMLEDDVRCSKNFLTAIKKV 240
           ILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYYVMLEDDVRCSKNFLTAIKKV
Sbjct: 181 ILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYYVMLEDDVRCSKNFLTAIKKV 240

Query: 241 IASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFYQEMPCDWLLTHFRGLLAQKN 300
           IASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFYQEMPCDWLLTHFRGLLAQKN
Sbjct: 241 IASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFYQEMPCDWLLTHFRGLLAQKN 300

Query: 301 VIRFKPSLFQHMGYYSSYKGTENKLKDDDFEEESFDIPDNPPASLYTNMNVFENYEASKA 360
           VIRFKPSLFQHMGYYSSYKGTENKLKDDDFEEESFDIPDNPPASLYTNMNVFENYEASKA
Sbjct: 301 VIRFKPSLFQHMGYYSSYKGTENKLKDDDFEEESFDIPDNPPASLYTNMNVFENYEASKA 360

Query: 361 YSSVDEYFWGKPPSTGDVFVIVFENPIIIKKIKVNTGTEDRQNDILHHGALDVGENVMPS 420
           YSSVDEYFWGKPPSTGDVFVIVFENPIIIKKIKVNTGTEDRQNDILHHGALDVGENVMPS
Sbjct: 361 YSSVDEYFWGKPPSTGDVFVIVFENPIIIKKIKVNTGTEDRQNDILHHGALDVGENVMPS 420

Query: 421 KQRRQCSTYLRLGEFKNGNFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSISIWTS 478
           KQRRQCSTYLRLGEFKNGNFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSISIWTS
Sbjct: 421 KQRRQCSTYLRLGEFKNGNFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSISIWTS 478


>gi|6912502 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 1 [Homo
           sapiens]
          Length = 535

 Score =  229 bits (583), Expect = 5e-60
 Identities = 129/397 (32%), Positives = 214/397 (53%), Gaps = 25/397 (6%)

Query: 101 LTIGLSSVKRKKGNYLLETIKSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKF 160
           + +G+ +VKR+  +YL+ET+ S+ +    EE  +  +VV + + +  +   +V ++ ++F
Sbjct: 137 IVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEF 196

Query: 161 AHHIIAGRLMVIHAPEEYYPILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYY 220
           +  I +G + VI  PE YYP L  LK  + D ++RV++R+KQN+DY FL+ +      YY
Sbjct: 197 SKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYY 256

Query: 221 VMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFY 280
           + LEDD+   +N+   IK     L    W+ LEFS+LG+IGK++ + DL  +  F+ MFY
Sbjct: 257 IQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFY 316

Query: 281 QEMPCDWLLTHFRGLLA---QKNV-----------IRFKPSLFQHMGYYSSYKGTENKLK 326
           +E P DWLL H   +     +K+            IRF+PSLFQH+G +SS  G   KL 
Sbjct: 317 KEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLT 376

Query: 327 DDDFEEE-SFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFEN 385
           D D+ +     I  NPPA + T++ V++ +   K Y   +++FW   P  GD  +  F+ 
Sbjct: 377 DKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMG-EDFFWAITPIAGDYILFKFDK 435

Query: 386 PIIIKKIKVNTGTEDRQNDILHHGALDV----GENVMPSKQ---RRQCSTYLRLGEFKNG 438
           P+ ++    ++G ++   DIL +  ++V     E +  SK+   +R    Y R+G+F+NG
Sbjct: 436 PVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFENG 495

Query: 439 NFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSISI 475
             E  G+       I   R+ V +    W I+  I I
Sbjct: 496 VAE--GMVDPSLNPISAFRLSVIQNSAVWAILNEIHI 530


>gi|237512959 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 2 [Homo
           sapiens]
          Length = 423

 Score =  226 bits (577), Expect = 3e-59
 Identities = 127/399 (31%), Positives = 215/399 (53%), Gaps = 25/399 (6%)

Query: 101 LTIGLSSVKRKKGNYLLETIKSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKF 160
           + +G+ +VKR+  +YL+ET+ S+ +    EE  +  +VV + + +  +   +V ++ ++F
Sbjct: 9   IVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEF 68

Query: 161 AHHIIAGRLMVIHAPEEYYPILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYY 220
           +  I +G + VI  PE YYP L  LK  + D ++RV++R+KQN+DY FL+ +      YY
Sbjct: 69  SKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYY 128

Query: 221 VMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFY 280
           + LEDD+   +N+   IK     L    W+ LEFS+LG+IGK++ + DL  +  F+ MFY
Sbjct: 129 IQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFY 188

Query: 281 QEMPCDWLLTHFRGLLA---QKNV-----------IRFKPSLFQHMGYYSSYKGTENKLK 326
           +E P DWLL H   +     +K+            IRF+PSLFQH+G +SS  G   KL 
Sbjct: 189 KEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLT 248

Query: 327 DDDFEEE-SFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFEN 385
           D D+ +     I  NPPA + T++ V++ +   K Y   +++FW   P  GD  +  F+ 
Sbjct: 249 DKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMG-EDFFWAITPIAGDYILFKFDK 307

Query: 386 PIIIKKIKVNTGTEDRQNDILHHGALDV----GENVMPSKQ---RRQCSTYLRLGEFKNG 438
           P+ ++    ++G ++   DIL +  ++V     E +  SK+   +R    Y R+G+F+NG
Sbjct: 308 PVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFENG 367

Query: 439 NFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSISIWT 477
             E  G+       I   R+ V +    W I+    +++
Sbjct: 368 VAE--GMVDPSLNPISAFRLSVIQNSAVWAILNEQRVFS 404


>gi|16915936 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 2 [Homo
           sapiens]
          Length = 563

 Score =  211 bits (537), Expect = 1e-54
 Identities = 125/402 (31%), Positives = 212/402 (52%), Gaps = 32/402 (7%)

Query: 101 LTIGLSSVKRKKGNYLLETIKSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKF 160
           + +G+ SV+R+  +YL +T+ S+  + S +E ++  +VV +A+ +S +  A+ ++I   F
Sbjct: 159 VVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALF 218

Query: 161 AHHIIAGRLMVIHAPEEYYPILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYY 220
              I +G L VI     +YP    L+ ++ DP++RV++R+KQN+DY FL+ +  +   YY
Sbjct: 219 PTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYY 278

Query: 221 VMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFY 280
           V LEDD+    N+L+ +K          W+ LEFS+LG+IGK++ S DL  +  F+LMFY
Sbjct: 279 VQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFY 338

Query: 281 QEMPCDWLLTHFRGLLA---QKNV-----------IRFKPSLFQHMGYYSSYKGTENKLK 326
           ++ P DWLL H   +     +K+            IRFKPSLFQH+G +SS  G   KLK
Sbjct: 339 RDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLK 398

Query: 327 DDDFEEESFDIPD-NPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFEN 385
           D DF +++      NPPA + T++  ++++   KAY   +++FW   P+ GD     F  
Sbjct: 399 DKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYLR-EDFFWAFTPAAGDFIRFRFFQ 457

Query: 386 PIIIKKIKVNTGTEDRQNDILHHGALDV--GENVMPSKQR------------RQCSTYLR 431
           P+ +++    +G  +   D L + +++V   +N    K+             R    YL+
Sbjct: 458 PLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQ 517

Query: 432 LGEFKNGNFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSI 473
           +G F  G  E  G        +  +R+ +      W+I+  I
Sbjct: 518 IGSFYKGVAE--GEVDPAFGPLEALRLSIQTDSPVWVILSEI 557


>gi|7710152 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 1 [Homo
           sapiens]
          Length = 548

 Score =  211 bits (537), Expect = 1e-54
 Identities = 125/402 (31%), Positives = 212/402 (52%), Gaps = 32/402 (7%)

Query: 101 LTIGLSSVKRKKGNYLLETIKSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKF 160
           + +G+ SV+R+  +YL +T+ S+  + S +E ++  +VV +A+ +S +  A+ ++I   F
Sbjct: 144 VVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALF 203

Query: 161 AHHIIAGRLMVIHAPEEYYPILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYY 220
              I +G L VI     +YP    L+ ++ DP++RV++R+KQN+DY FL+ +  +   YY
Sbjct: 204 PTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYY 263

Query: 221 VMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFY 280
           V LEDD+    N+L+ +K          W+ LEFS+LG+IGK++ S DL  +  F+LMFY
Sbjct: 264 VQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFY 323

Query: 281 QEMPCDWLLTHFRGLLA---QKNV-----------IRFKPSLFQHMGYYSSYKGTENKLK 326
           ++ P DWLL H   +     +K+            IRFKPSLFQH+G +SS  G   KLK
Sbjct: 324 RDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLK 383

Query: 327 DDDFEEESFDIPD-NPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFEN 385
           D DF +++      NPPA + T++  ++++   KAY   +++FW   P+ GD     F  
Sbjct: 384 DKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYLR-EDFFWAFTPAAGDFIRFRFFQ 442

Query: 386 PIIIKKIKVNTGTEDRQNDILHHGALDV--GENVMPSKQR------------RQCSTYLR 431
           P+ +++    +G  +   D L + +++V   +N    K+             R    YL+
Sbjct: 443 PLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQ 502

Query: 432 LGEFKNGNFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSI 473
           +G F  G  E  G        +  +R+ +      W+I+  I
Sbjct: 503 IGSFYKGVAE--GEVDPAFGPLEALRLSIQTDSPVWVILSEI 542


>gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score =  118 bits (296), Expect = 1e-26
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 14/257 (5%)

Query: 210 LNFCANTSDYYVMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDL 269
           +NF +N SDY+++LED + C+  F  AI   +++ +   WV LEFS L   GK++ + D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 270 PRLAHFLLMFYQEMPCDWLLTHFRGLLAQKNVIRFKPSLFQHMGYYSSYKGTENKLKDDD 329
            RL  F L+F+++ P   LL+ FR LLAQ   I F PS+F H G YS +      ++ D 
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKD- 119

Query: 330 FEEESFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFENPIII 389
                F  PDNP A++ T+M           Y+   E +    P  G+   ++ + P   
Sbjct: 120 ---RVFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKN 176

Query: 390 KKIKVNTGTEDRQNDILHHGALDVGENVMPSKQRRQCSTYLRLGEFKNGNFEMSGVNQKI 449
            +I V           L  G ++ G +  P +  + C+ Y  LG    GN +    +++ 
Sbjct: 177 TQIAVGRYR-------LQQGQVEPGYD--PQEDPKSCARYALLGPLVGGNLDQVVFSEEE 227

Query: 450 PFD-IHCMRIYVTKTQK 465
             + ++C+R+ V  +Q+
Sbjct: 228 SVEQLNCIRLLVLASQE 244


>gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score =  118 bits (296), Expect = 1e-26
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 14/257 (5%)

Query: 210 LNFCANTSDYYVMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDL 269
           +NF +N SDY+++LED + C+  F  AI   +++ +   WV LEFS L   GK++ + D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 270 PRLAHFLLMFYQEMPCDWLLTHFRGLLAQKNVIRFKPSLFQHMGYYSSYKGTENKLKDDD 329
            RL  F L+F+++ P   LL+ FR LLAQ   I F PS+F H G YS +      ++ D 
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKD- 119

Query: 330 FEEESFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFENPIII 389
                F  PDNP A++ T+M           Y+   E +    P  G+   ++ + P   
Sbjct: 120 ---RVFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKN 176

Query: 390 KKIKVNTGTEDRQNDILHHGALDVGENVMPSKQRRQCSTYLRLGEFKNGNFEMSGVNQKI 449
            +I V           L  G ++ G +  P +  + C+ Y  LG    GN +    +++ 
Sbjct: 177 TQIAVGRYR-------LQQGQVEPGYD--PQEDPKSCARYALLGPLVGGNLDQVVFSEEE 227

Query: 450 PFD-IHCMRIYVTKTQK 465
             + ++C+R+ V  +Q+
Sbjct: 228 SVEQLNCIRLLVLASQE 244


>gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score =  118 bits (296), Expect = 1e-26
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 14/257 (5%)

Query: 210 LNFCANTSDYYVMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDL 269
           +NF +N SDY+++LED + C+  F  AI   +++ +   WV LEFS L   GK++ + D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 270 PRLAHFLLMFYQEMPCDWLLTHFRGLLAQKNVIRFKPSLFQHMGYYSSYKGTENKLKDDD 329
            RL  F L+F+++ P   LL+ FR LLAQ   I F PS+F H G YS +      ++ D 
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKD- 119

Query: 330 FEEESFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFENPIII 389
                F  PDNP A++ T+M           Y+   E +    P  G+   ++ + P   
Sbjct: 120 ---RVFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKN 176

Query: 390 KKIKVNTGTEDRQNDILHHGALDVGENVMPSKQRRQCSTYLRLGEFKNGNFEMSGVNQKI 449
            +I V           L  G ++ G +  P +  + C+ Y  LG    GN +    +++ 
Sbjct: 177 TQIAVGRYR-------LQQGQVEPGYD--PQEDPKSCARYALLGPLVGGNLDQVVFSEEE 227

Query: 450 PFD-IHCMRIYVTKTQK 465
             + ++C+R+ V  +Q+
Sbjct: 228 SVEQLNCIRLLVLASQE 244


>gi|188497703 semaphorin 3F [Homo sapiens]
          Length = 785

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 192 PEDRVKFRSKQNVDYAFLLNFCANTSDYYVMLEDD 226
           P  R+ F+  +    A   NF  NT+DY ++L+D+
Sbjct: 30  PRVRLSFKELKATGTAHFFNFLLNTTDYRILLKDE 64


>gi|38569484 kinesin family member 21A [Homo sapiens]
          Length = 1661

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 319  KGTENKLKDDDFEEESFDIPDNPPASLYTNMNVFENYEASKAYSSVDE 366
            K  E K  D    E S   P +PP+     +NVF     S+  +SV +
Sbjct: 1241 KAKEQKHSDSGTSEASLSPPSSPPSRPRNELNVFNRLTVSQGNTSVQQ 1288


>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
            sapiens]
          Length = 2134

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 11/40 (27%), Positives = 25/40 (62%)

Query: 206  YAFLLNFCANTSDYYVMLEDDVRCSKNFLTAIKKVIASLE 245
            Y+FL ++C + +  + +L + V C ++ LT  +K+I + +
Sbjct: 1341 YSFLEDYCGHENGTFRILTESVPCCEDGLTCSRKIIVAFQ 1380


>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
            sapiens]
          Length = 2134

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 11/40 (27%), Positives = 25/40 (62%)

Query: 206  YAFLLNFCANTSDYYVMLEDDVRCSKNFLTAIKKVIASLE 245
            Y+FL ++C + +  + +L + V C ++ LT  +K+I + +
Sbjct: 1341 YSFLEDYCGHENGTFRILTESVPCCEDGLTCSRKIIVAFQ 1380


>gi|42476076 hypothetical protein LOC22878 [Homo sapiens]
          Length = 1435

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 11/82 (13%)

Query: 147 SWRDAMVQDIT---QKFAHHIIAGRLMVIHAPEEYYPILDGLKRNYNDPEDRVKFRSKQN 203
           S+R+  +Q +     +F +H +A   M++ +  E  P+    K +        + R + N
Sbjct: 125 SYRETFLQSMPASDHEFLNHYLA--CMLVASSSEAEPVEQFSKLSQE------QHRIQHN 176

Query: 204 VDYAFLLNFCANTSDYYVMLED 225
            DY++   F  NT  YYV+L D
Sbjct: 177 SDYSYPKWFIPNTLKYYVLLHD 198


>gi|163659918 sacsin [Homo sapiens]
          Length = 4579

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/53 (24%), Positives = 27/53 (50%)

Query: 188  NYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYYVMLEDDVRCSKNFLTAIKKV 240
            +YN    R+ FR++Q    + + + C NT+D Y ++++   C    +   + V
Sbjct: 1638 SYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSV 1690


>gi|148839305 structural maintenance of chromosomes flexible hinge
           domain containing 1 [Homo sapiens]
          Length = 2005

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 291 HFRGLLAQKNVIRFKPSLFQHMGYYSSYKGTENKLKDDDFEEESFDIPDNPPASLYTNMN 350
           H  G    + +IR+ P L+    Y        +KLKD+D E++ F +      +      
Sbjct: 416 HVEGDGVVEGIIRYHPFLYDRETYPDD-PCFPSKLKDEDDEDDCFILEK----AARGKRP 470

Query: 351 VFENYEASKA--YSSVDEYFWGKPP 373
           +FE +   +   Y+SV+++ W  PP
Sbjct: 471 IFECFWNGRLIPYTSVEDFDWCTPP 495


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,250,139
Number of Sequences: 37866
Number of extensions: 744107
Number of successful extensions: 1526
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1490
Number of HSP's gapped (non-prelim): 18
length of query: 478
length of database: 18,247,518
effective HSP length: 106
effective length of query: 372
effective length of database: 14,233,722
effective search space: 5294944584
effective search space used: 5294944584
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.