Guide to the Human Genome
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Name: KIAA1012 Sequence: fasta or formatted (1435aa) NCBI GI: 42476076
Description:

hypothetical protein LOC22878

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         91           3
 C cysteine            2.0         29           1
 D aspartate           4.3         62           1
 E glutamate           7.0        100           2
 F phenylalanine       4.1         59           2
 G glycine             4.7         67           2
 H histidine           3.3         48           2
 I isoleucine          5.3         76           3
 K lysine              6.1         87           2
 L leucine            10.6        152           4
 M methionine          1.5         22           1
 N asparagine          4.5         65           2
 P proline             5.3         76           2
 Q glutamine           5.4         77           2
 R arginine            4.3         61           2
 S serine              9.8        141           4
 T threonine           4.9         71           2
 V valine              6.6         94           2
 W tryptophan          0.8         11           1
 Y tyrosine            3.2         46           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC22878 
ATRX                  0.004   transcriptional regulator ATRX isoform 2 
ATRX                  0.004   transcriptional regulator ATRX isoform 1 
LOC100133280          0.004   PREDICTED: similar to Putative POM121-like protein ...
PTPRM                 0.003   protein tyrosine phosphatase, receptor type, M isof...
PTPRM                 0.003   protein tyrosine phosphatase, receptor type, M isof...
CAMK2B                0.003   calcium/calmodulin-dependent protein kinase II beta ...
MUC4                  0.003   mucin 4 isoform a 
ARHGAP24              0.002   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.002   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.002   Rho GTPase activating protein 24 isoform 1 
SPAG17                0.002   sperm associated antigen 17 
ALPK3                 0.002   alpha-kinase 3 
TTLL5                 0.002   tubulin tyrosine ligase-like family, member 5 
MTMR8                 0.002   myotubularin related protein 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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