Search of human proteins with 165377202

Search of human proteins with 165377202

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|165377202 methyltransferase 5 domain containing 1 isoform 2
[Homo sapiens]
         (273 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|165377202 methyltransferase 5 domain containing 1 isoform 2 [...   553   e-158
gi|165377209 methyltransferase 5 domain containing 1 isoform 1 [...   524   e-149
gi|32698918 NOL1/NOP2/Sun domain family, member 6 [Homo sapiens]       35   0.092
gi|40316918 NOL1/NOP2/Sun domain family 4 protein [Homo sapiens]       32   0.46 
gi|66346737 glucosidase, alpha; neutral C [Homo sapiens]               31   1.0  
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         29   3.9  
gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens]                 29   5.0  
gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens]                 29   5.0  
gi|33188431 tetratricopeptide repeat protein isoform 3 [Homo sap...    29   5.0  
gi|33188427 tetratricopeptide repeat protein isoform 2 [Homo sap...    29   5.0  
gi|33356174 pinin, desmosome associated protein [Homo sapiens]         28   6.6  
gi|7657198 dimethyladenosine transferase [Homo sapiens]                28   6.6  
gi|189011544 ubiquitously transcribed tetratricopeptide repeat, ...    28   8.6  
gi|11545785 NOL1/NOP2/Sun domain family, member 3 [Homo sapiens]       28   8.6  
gi|166706917 hypothetical protein LOC199920 [Homo sapiens]             28   8.6  

>gi|165377202 methyltransferase 5 domain containing 1 isoform 2
           [Homo sapiens]
          Length = 273

 Score =  553 bits (1424), Expect = e-158
 Identities = 273/273 (100%), Positives = 273/273 (100%)

Query: 1   MLRYPYFCRMYKECLSCWLESGIPNLGVWPNRIHTTAEKYREYEAREQTDQTQAQELHRS 60
           MLRYPYFCRMYKECLSCWLESGIPNLGVWPNRIHTTAEKYREYEAREQTDQTQAQELHRS
Sbjct: 1   MLRYPYFCRMYKECLSCWLESGIPNLGVWPNRIHTTAEKYREYEAREQTDQTQAQELHRS 60

Query: 61  QDRDFETMAKLHIPVMVDEVVHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDR 120
           QDRDFETMAKLHIPVMVDEVVHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDR
Sbjct: 61  QDRDFETMAKLHIPVMVDEVVHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDR 120

Query: 121 DPTAYALAEHLSELYPKQIRAMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTP 180
           DPTAYALAEHLSELYPKQIRAMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTP
Sbjct: 121 DPTAYALAEHLSELYPKQIRAMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTP 180

Query: 181 ERGFSLRKDGPLDMRMDGGRYPDMPTAADVVNALDQQALASILRTYGEEKHAKKIASAIV 240
           ERGFSLRKDGPLDMRMDGGRYPDMPTAADVVNALDQQALASILRTYGEEKHAKKIASAIV
Sbjct: 181 ERGFSLRKDGPLDMRMDGGRYPDMPTAADVVNALDQQALASILRTYGEEKHAKKIASAIV 240

Query: 241 QARSIYPITRTQQLASIVAEYSETYFPVAQTLY 273
           QARSIYPITRTQQLASIVAEYSETYFPVAQTLY
Sbjct: 241 QARSIYPITRTQQLASIVAEYSETYFPVAQTLY 273


>gi|165377209 methyltransferase 5 domain containing 1 isoform 1
           [Homo sapiens]
          Length = 407

 Score =  524 bits (1349), Expect = e-149
 Identities = 259/259 (100%), Positives = 259/259 (100%)

Query: 1   MLRYPYFCRMYKECLSCWLESGIPNLGVWPNRIHTTAEKYREYEAREQTDQTQAQELHRS 60
           MLRYPYFCRMYKECLSCWLESGIPNLGVWPNRIHTTAEKYREYEAREQTDQTQAQELHRS
Sbjct: 1   MLRYPYFCRMYKECLSCWLESGIPNLGVWPNRIHTTAEKYREYEAREQTDQTQAQELHRS 60

Query: 61  QDRDFETMAKLHIPVMVDEVVHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDR 120
           QDRDFETMAKLHIPVMVDEVVHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDR
Sbjct: 61  QDRDFETMAKLHIPVMVDEVVHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDR 120

Query: 121 DPTAYALAEHLSELYPKQIRAMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTP 180
           DPTAYALAEHLSELYPKQIRAMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTP
Sbjct: 121 DPTAYALAEHLSELYPKQIRAMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTP 180

Query: 181 ERGFSLRKDGPLDMRMDGGRYPDMPTAADVVNALDQQALASILRTYGEEKHAKKIASAIV 240
           ERGFSLRKDGPLDMRMDGGRYPDMPTAADVVNALDQQALASILRTYGEEKHAKKIASAIV
Sbjct: 181 ERGFSLRKDGPLDMRMDGGRYPDMPTAADVVNALDQQALASILRTYGEEKHAKKIASAIV 240

Query: 241 QARSIYPITRTQQLASIVA 259
           QARSIYPITRTQQLASIVA
Sbjct: 241 QARSIYPITRTQQLASIVA 259


>gi|32698918 NOL1/NOP2/Sun domain family, member 6 [Homo sapiens]
          Length = 469

 Score = 34.7 bits (78), Expect = 0.092
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 12/106 (11%)

Query: 80  VVHCLSPQKGQIFLDMTFGSGG---HTKAILQKESDIVLYALDR-DPTAYALAEHLSELY 135
           V H L+PQ G+  LD+    GG   H  A++  + +++  ALD+       + ++   L 
Sbjct: 226 VSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVI--ALDKIFNKVEKIKQNALLLG 283

Query: 136 PKQIRAMLGQFSQAEALLMKAGVQ------PGTFDGVLMDLGCSSM 175
              IRA     ++A  L M    +      P +FD +L+D  CS M
Sbjct: 284 LNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAPCSGM 329


>gi|40316918 NOL1/NOP2/Sun domain family 4 protein [Homo sapiens]
          Length = 384

 Score = 32.3 bits (72), Expect = 0.46
 Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 3/96 (3%)

Query: 81  VHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDRDPTAYALAEHLSELY-PKQI 139
           V  L  Q G I LD+    GG T A+LQ      L A D  P+  A  + +   Y P++I
Sbjct: 166 VLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEI 225

Query: 140 RAMLGQFSQAEALLMKAGVQPG-TFDGVLMDLGCSS 174
           R    Q         K G   G T+D VL+D+ C++
Sbjct: 226 RDG-NQVRVTSWDGRKWGELEGDTYDRVLVDVPCTT 260


>gi|66346737 glucosidase, alpha; neutral C [Homo sapiens]
          Length = 914

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 20  ESGIPNLGVWPNRIHTTAEKYREYEAREQTDQTQAQELHRSQDRDFETMAKLHIPVMVDE 79
           E  IP   +W +  HT  ++Y  ++     +  + QEL RS+ R    ++  HI +  D 
Sbjct: 387 EHDIPYDAMWLDIEHTEGKRYFTWDKNRFPNPKRMQELLRSKKRKLVVISDPHIKIDPDY 446

Query: 80  VVHCLSPQKG 89
            V+  +  +G
Sbjct: 447 SVYVKAKDQG 456


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)

Query: 28   VWP---NRIHTTAEKYREYEAREQTDQTQAQELHRSQDRDFE 66
            +WP   +R HTT  KY +Y+A   + Q   QE   S+D + E
Sbjct: 1265 IWPCESSRSHTTIAKYAQYQA--SSFQESLQEEKESEDEESE 1304


>gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens]
          Length = 808

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 9/135 (6%)

Query: 81  VHCLSPQKGQIFLDMTFGSGGHTK--AILQKESDIVLYALDRDPTAYALAEHLSELYPKQ 138
           V  L+PQ+ +  LDM    GG T   A L K + ++   L  D  A  L   +  L+   
Sbjct: 373 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVI---LANDANAERLKSVVGNLHRLG 429

Query: 139 IRAMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDG 198
           +   +   S  +       V  G FD VL+D  CS   + + +      KD    +R   
Sbjct: 430 VTNTI--ISHYDGRQFPKVV--GGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCAH 485

Query: 199 GRYPDMPTAADVVNA 213
            +   + +A D VNA
Sbjct: 486 LQKELLLSAIDSVNA 500


>gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens]
          Length = 808

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 9/135 (6%)

Query: 81  VHCLSPQKGQIFLDMTFGSGGHTK--AILQKESDIVLYALDRDPTAYALAEHLSELYPKQ 138
           V  L+PQ+ +  LDM    GG T   A L K + ++   L  D  A  L   +  L+   
Sbjct: 373 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVI---LANDANAERLKSVVGNLHRLG 429

Query: 139 IRAMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDG 198
           +   +   S  +       V  G FD VL+D  CS   + + +      KD    +R   
Sbjct: 430 VTNTI--ISHYDGRQFPKVV--GGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCAH 485

Query: 199 GRYPDMPTAADVVNA 213
            +   + +A D VNA
Sbjct: 486 LQKELLLSAIDSVNA 500


>gi|33188431 tetratricopeptide repeat protein isoform 3 [Homo sapiens]
          Length = 1347

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 31   NRIHTTAEKYREYEAREQTDQTQAQELHRSQDRD 64
            NR HTT  KY +Y+A    +  + +   R+Q +D
Sbjct: 973  NRSHTTIAKYAQYQASSFQESLREENEKRTQHKD 1006


>gi|33188427 tetratricopeptide repeat protein isoform 2 [Homo sapiens]
          Length = 1240

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 31   NRIHTTAEKYREYEAREQTDQTQAQELHRSQDRD 64
            NR HTT  KY +Y+A    +  + +   R+Q +D
Sbjct: 973  NRSHTTIAKYAQYQASSFQESLREENEKRTQHKD 1006


>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
          Length = 717

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 8/62 (12%)

Query: 33  IHTTAEKYREYEAREQ------TDQTQAQELHRSQDRDFETMAKLHIPVMVDEVVHCLSP 86
           +H+ AEK +E E ++Q       ++T+ +E  + QD   E +  + +  MV+ V H ++ 
Sbjct: 345 VHSDAEKEQEEEEQKQEMEVKMEEETEVRESEKQQDSQPEEV--MDVLEMVENVKHVIAD 402

Query: 87  QK 88
           Q+
Sbjct: 403 QE 404


>gi|7657198 dimethyladenosine transferase [Homo sapiens]
          Length = 313

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 46  REQTDQTQAQELHRSQDRDFETMAKLHI---PVMVDEVVHCLSPQKGQIFLDMTFGSGGH 102
           R +  Q Q +EL  +    F T    HI   P++++ ++   + +   + L++  G+G  
Sbjct: 11  RRRGRQEQRRELKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNM 70

Query: 103 TKAILQKESDIVLYALD 119
           T  +L+K   +V   LD
Sbjct: 71  TVKLLEKAKKVVACELD 87


>gi|189011544 ubiquitously transcribed tetratricopeptide repeat, X
            chromosome [Homo sapiens]
          Length = 1401

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 31   NRIHTTAEKYREYEAREQTDQTQAQELHRSQDRD 64
            NR HTT  KY +Y+A    +  + +   RS  +D
Sbjct: 1026 NRSHTTIAKYAQYQASSFQESLREENEKRSHHKD 1059


>gi|11545785 NOL1/NOP2/Sun domain family, member 3 [Homo sapiens]
          Length = 340

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 1/94 (1%)

Query: 81  VHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDRDPTAYALAEHLSELYPKQIR 140
           V  L  + G+  LD+    GG + A+LQ      L+  + D           E +  Q  
Sbjct: 124 VLALELRDGEKVLDLCAAPGGKSIALLQCACPGYLHCNEYDSLRLRWLRQTLESFIPQPL 183

Query: 141 AMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSS 174
             + + S+ +   M    QP  FD VL+D  CS+
Sbjct: 184 INVIKVSELDGRKM-GDAQPEMFDKVLVDAPCSN 216


>gi|166706917 hypothetical protein LOC199920 [Homo sapiens]
          Length = 728

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 13/118 (11%)

Query: 26  LGVWPNRIHTTAEKYREYEAREQTD-------QTQAQELHRSQDRDFETMAKLHIP---- 74
           L +W  +  T  EK  +  A E          +T+ Q L +++ +  E + +        
Sbjct: 603 LKMWKPKFLTPKEKKEKNGAEESESFSPRNFFKTKKQNLEKNRMKREEKLFRERFKYDKE 662

Query: 75  -VMVDEVVHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDRDPTAYALAEHL 131
            ++++  V C +  +  IF D+    G   + I   E ++V+    +    Y L EHL
Sbjct: 663 IIVINTAVACSNNSRNGIF-DLPISPGEELEVIDTTEQNLVICRNSKGKYGYVLIEHL 719


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,935,296
Number of Sequences: 37866
Number of extensions: 406258
Number of successful extensions: 1002
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 993
Number of HSP's gapped (non-prelim): 15
length of query: 273
length of database: 18,247,518
effective HSP length: 101
effective length of query: 172
effective length of database: 14,423,052
effective search space: 2480764944
effective search space used: 2480764944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.