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Search of human proteins with 16506297
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16506297 hypothetical protein LOC92667 [Homo sapiens]
(344 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16506297 hypothetical protein LOC92667 [Homo sapiens] 698 0.0
gi|31377634 guanylate binding protein 4 [Homo sapiens] 39 0.007
gi|110349719 titin isoform N2-A [Homo sapiens] 33 0.49
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l... 32 0.83
gi|13435145 clusterin associated protein 1 isoform 2 [Homo sapiens] 31 1.4
gi|52345626 clusterin associated protein 1 isoform 1 [Homo sapiens] 31 1.4
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l... 31 1.8
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l... 31 1.8
gi|113425119 PREDICTED: similar to golgi autoantigen, golgin sub... 30 2.4
gi|63003928 hypothetical protein LOC149297 [Homo sapiens] 30 3.2
gi|38679914 mitochondrial distribution and morphology 20 [Homo s... 30 4.1
gi|83367069 cyclin-dependent kinase-like 5 [Homo sapiens] 29 5.4
gi|4507281 cyclin-dependent kinase-like 5 [Homo sapiens] 29 5.4
gi|218751874 hairy and enhancer of split 6 isoform b [Homo sapiens] 29 7.0
gi|211971060 G protein-coupled receptor 107 isoform 2 [Homo sapi... 29 7.0
gi|211971058 G protein-coupled receptor 107 isoform 1 [Homo sapi... 29 7.0
gi|56711308 G protein-coupled receptor 107 isoform 3 [Homo sapiens] 29 7.0
gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo ... 28 9.2
gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo ... 28 9.2
gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens] 28 9.2
gi|13775222 MAX dimerization protein 3 isoform a [Homo sapiens] 28 9.2
>gi|16506297 hypothetical protein LOC92667 [Homo sapiens]
Length = 344
Score = 698 bits (1801), Expect = 0.0
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MKMKLFQTICRQLRSSKFSVESAALVAFSTSSYSCGRKKKVNPYEEVDQEKYSNLVQSVL 60
MKMKLFQTICRQLRSSKFSVESAALVAFSTSSYSCGRKKKVNPYEEVDQEKYSNLVQSVL
Sbjct: 1 MKMKLFQTICRQLRSSKFSVESAALVAFSTSSYSCGRKKKVNPYEEVDQEKYSNLVQSVL 60
Query: 61 SSRGVAQTPGSVEEDALLCGPVSKHKLPNQGEDRRVPQNWFPIFNPERSDKPNASDPSVP 120
SSRGVAQTPGSVEEDALLCGPVSKHKLPNQGEDRRVPQNWFPIFNPERSDKPNASDPSVP
Sbjct: 61 SSRGVAQTPGSVEEDALLCGPVSKHKLPNQGEDRRVPQNWFPIFNPERSDKPNASDPSVP 120
Query: 121 LKIPLQRNVIPSVTRVLQQTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFH 180
LKIPLQRNVIPSVTRVLQQTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFH
Sbjct: 121 LKIPLQRNVIPSVTRVLQQTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFH 180
Query: 181 EALESILSPQETLKERDENLLKSGYIESVQHILKDVSGVRALESAVQHETLNYIGLLDCV 240
EALESILSPQETLKERDENLLKSGYIESVQHILKDVSGVRALESAVQHETLNYIGLLDCV
Sbjct: 181 EALESILSPQETLKERDENLLKSGYIESVQHILKDVSGVRALESAVQHETLNYIGLLDCV 240
Query: 241 AEYQGKLCVIDWKTSEKPKPFIQSTFDNPLQVVAYMGAMNHDTNYSFQVQCGLIVVAYKD 300
AEYQGKLCVIDWKTSEKPKPFIQSTFDNPLQVVAYMGAMNHDTNYSFQVQCGLIVVAYKD
Sbjct: 241 AEYQGKLCVIDWKTSEKPKPFIQSTFDNPLQVVAYMGAMNHDTNYSFQVQCGLIVVAYKD 300
Query: 301 GSPAHPHFMDAELCSQYWTKWLLRLEEYTEKKKNQNIQKPEYSE 344
GSPAHPHFMDAELCSQYWTKWLLRLEEYTEKKKNQNIQKPEYSE
Sbjct: 301 GSPAHPHFMDAELCSQYWTKWLLRLEEYTEKKKNQNIQKPEYSE 344
>gi|31377634 guanylate binding protein 4 [Homo sapiens]
Length = 640
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 135 RVLQQTMTKQQVFLLERWK-QRMILELGEDGFKEYTSNVFLQGKRFHEALESILSPQETL 193
R +++ K+Q L E+ K Q+ ++E E F+EY + + K+ E E++L E L
Sbjct: 507 RAMKEAAEKEQELLREKQKEQQQMMEAQERSFQEYMAQM---EKKLEEERENLLREHERL 563
Query: 194 KER----DENLLKSGYIESVQHILKDVSGVRALESAVQHETLNYIGLLD 238
+ E +LK + + + + K+++ ++ + ++E L + +LD
Sbjct: 564 LKHKLKVQEEMLKEEFQKKSEQLNKEINQLKEKIESTKNEQLRLLKILD 612
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 32.7 bits (73), Expect = 0.49
Identities = 38/190 (20%), Positives = 81/190 (42%), Gaps = 37/190 (19%)
Query: 37 RKKKVNPYEEVDQEKYSNLVQSVLSSRGVAQTPGSVEEDALLCGP--------------- 81
++++V P E ++ + + +S + + P S+EE + P
Sbjct: 10228 KEEEVLPVEVTEEPE-----EEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKKAVPEAPT 10282
Query: 82 --VSKHKLPNQGEDRRVPQNWFPIFNPERSDKPNASDPSVPLKIPLQRNVIP---SVTRV 136
K + P +++P+ P+ ++ + P A P VP K+P ++ ++P +V
Sbjct: 10283 PVPKKVEAPPAKVSKKIPEEKVPV-PVQKKEAPPAKVPEVPKKVPEKKVLVPKKEAVPPA 10341
Query: 137 LQQTMTKQQVFLLERW----KQRMILELGEDGFKE-------YTSNVFLQGKRFHEALES 185
+T+ +++V + R K+R+ LE+ E +E + + + FHE E
Sbjct: 10342 KGRTVLEEKVSVAFRQEVVVKERLELEVVEAEVEEIPEEEEFHEVEEYFEEGEFHEVEEF 10401
Query: 186 ILSPQETLKE 195
I Q ++E
Sbjct: 10402 IKLEQHRVEE 10411
Score = 28.5 bits (62), Expect = 9.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 106 PERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQTMTKQ 144
P++ + P A P VP K+ +R ++P VL +T++
Sbjct: 10202 PKKEEAPPAKVPEVPKKVEEKRIILPKEEEVLPVEVTEE 10240
>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 32.0 bits (71), Expect = 0.83
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 117 PSVPLKIPLQ--RNVIPSVTRVLQ-QTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVF 173
P+VP ++ LQ R + V LQ Q Q + LL R ++ I E E+ ++ +
Sbjct: 300 PAVPSEVELQHLRKELERVAGELQSQVKNNQHISLLNRRQEERIREQ-EERLRKQEERLQ 358
Query: 174 LQGKRFHEALESILSPQETLKERDENLLKSGYIESVQHILKDVSGVRALESAVQ--HETL 231
Q HE L + PQ +E + + +E L++ G LE+A Q +
Sbjct: 359 EQ----HEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKLGEEHLEAASQQNQQLT 414
Query: 232 NYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFDNPLQVVAYMGAMNH 281
+ L+ E G +D + E P+P + S ++P A M+H
Sbjct: 415 AQLSLMALPGEGHGGE-HLDSEGEEAPRP-MPSVPEDPESREAMSSFMDH 462
>gi|13435145 clusterin associated protein 1 isoform 2 [Homo sapiens]
Length = 247
Score = 31.2 bits (69), Expect = 1.4
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Query: 103 IFNPERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQTMTKQQVFLLERWKQRMILELGE 162
+ N SD+ N K+ L+RN + L+ + + F+ E K L+
Sbjct: 36 LLNNVASDEANLEAKIEKRKLELERN-----RKRLETLQSVRPCFMDEYEKTEEELQKQY 90
Query: 163 DGFKEYTSNVF-----------LQGKRFHEALESILSPQETLKERDENLLKSG 204
D + E N+ ++ +RF EA ++ Q LKE ++ LLKSG
Sbjct: 91 DTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSG 143
>gi|52345626 clusterin associated protein 1 isoform 1 [Homo sapiens]
Length = 413
Score = 31.2 bits (69), Expect = 1.4
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Query: 103 IFNPERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQTMTKQQVFLLERWKQRMILELGE 162
+ N SD+ N K+ L+RN + L+ + + F+ E K L+
Sbjct: 202 LLNNVASDEANLEAKIEKRKLELERN-----RKRLETLQSVRPCFMDEYEKTEEELQKQY 256
Query: 163 DGFKEYTSNVF-----------LQGKRFHEALESILSPQETLKERDENLLKSG 204
D + E N+ ++ +RF EA ++ Q LKE ++ LLKSG
Sbjct: 257 DTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSG 309
>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 30.8 bits (68), Expect = 1.8
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 117 PSVPLKIPLQ--RNVIPSVTRVLQ-QTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVF 173
P+VP ++ LQ R + V LQ Q Q + LL R ++ I E E+ ++ +
Sbjct: 300 PAVPSEVELQHLRKELERVAGELQSQVKNNQHISLLNRRQEERIREQ-EERLRKQEERLQ 358
Query: 174 LQGKRFHEALESILSPQETLKERDENLLKSGYIESVQHILKDVSGVRALESAVQ 227
Q HE L + PQ +E + + +E L++ G LE+A Q
Sbjct: 359 EQ----HEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKLGEEHLEAASQ 408
>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 4 [Homo sapiens]
Length = 632
Score = 30.8 bits (68), Expect = 1.8
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 117 PSVPLKIPLQ--RNVIPSVTRVLQ-QTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVF 173
P+VP ++ LQ R + V LQ Q Q + LL R ++ I E E+ ++ +
Sbjct: 300 PAVPSEVELQHLRKELERVAGELQSQVKNNQHISLLNRRQEERIREQ-EERLRKQEERLQ 358
Query: 174 LQGKRFHEALESILSPQETLKERDENLLKSGYIESVQHILKDVSGVRALESAVQ 227
Q HE L + PQ +E + + +E L++ G LE+A Q
Sbjct: 359 EQ----HEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKLGEEHLEAASQ 408
>gi|113425119 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 8E isoform 2 [Homo sapiens]
Length = 631
Score = 30.4 bits (67), Expect = 2.4
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Query: 117 PSVPLKIPLQ--RNVIPSVTRVLQ-QTMTKQQVFLLERWKQRMILELGEDGFKEYTSNVF 173
P+VP ++ LQ R + V LQ Q Q + LL R ++ I E E+ ++ +
Sbjct: 299 PAVPSEVELQHLRKELERVAGELQSQVKNNQHISLLNRRQEERIREQ-EERLRKQEERLQ 357
Query: 174 LQGKRFHEALESILSPQETLKERDENLLKSGYIESVQHILKDVSGVRALESAVQ--HETL 231
Q HE L + PQ +E + + +E L++ G LE A Q +
Sbjct: 358 EQ----HEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKLGEEHLEVASQQNQQLT 413
Query: 232 NYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFDNPLQVVAYMGAMNH 281
+ L+ E G +D + E P+P + S ++P A M+H
Sbjct: 414 AQLSLMALPGEGHGGE-HLDSEGEEAPQP-MPSVPEDPESREAMSSFMDH 461
>gi|63003928 hypothetical protein LOC149297 [Homo sapiens]
Length = 261
Score = 30.0 bits (66), Expect = 3.2
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 34 SCGRKKKVNPYEEVDQEKYS------NLVQSVLSSRGVAQT-PGSVEEDALLCGPVSKHK 86
+C + + N Y ++ + V+++ S GV+ G+ E L GP +K
Sbjct: 73 ACNQMEFFNTYSDLGMSSWELPDLREGRVKAISDSDGVSYPWYGNTTETVTLVGPTNKIS 132
Query: 87 LPNQGEDRRVPQNWFPIFNPERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQTMTKQQV 146
R + F P + SD +VPL ++R+ + V T TK+++
Sbjct: 133 --------RFSVSMNDNFYPSVTWAVPVSDSNVPLLTRIKRDQSFTTWLVAMNTTTKEKI 184
Query: 147 FLLE-RWKQRMILEL 160
L +W+ R+ +E+
Sbjct: 185 ILQTIKWRMRVDIEV 199
>gi|38679914 mitochondrial distribution and morphology 20 [Homo
sapiens]
Length = 972
Score = 29.6 bits (65), Expect = 4.1
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 191 ETLKERDENLLKSGYIESVQHILKDVSGVRALESAVQHETLNYIGLLDCVAEYQGKLCVI 250
+++ +DENL K+ ++ + +++ + +E+ + E Y +L+ + +YQ L VI
Sbjct: 159 QSISAQDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVEL--YYMILERLGKYQEALDVI 216
Query: 251 DWKTSEKPKPFIQS 264
K EK IQS
Sbjct: 217 RGKLGEKLTSEIQS 230
>gi|83367069 cyclin-dependent kinase-like 5 [Homo sapiens]
Length = 1030
Score = 29.3 bits (64), Expect = 5.4
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 11/144 (7%)
Query: 172 VFLQGKRFHEALESILSPQETLKERDENLLKSGYIESVQHILK-DVSGVRALESAVQHET 230
+F RFH ++ ++L+ R +L S ++ ++++LK D + E + H T
Sbjct: 237 LFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPT 296
Query: 231 LNYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFDNPLQVVAYMGAMNHDTNYSFQVQ 290
LLD K KP ST N Q +H + S +Q
Sbjct: 297 FQTQRLLDRSPSRSAK---------RKPYHVESSTLSNRNQAGKSTALQSHHRSNSKDIQ 347
Query: 291 CGLIVVAYKD-GSPAHPHFMDAEL 313
+ + D G PA+ F++ L
Sbjct: 348 NLSVGLPRADEGLPANESFLNGNL 371
>gi|4507281 cyclin-dependent kinase-like 5 [Homo sapiens]
Length = 1030
Score = 29.3 bits (64), Expect = 5.4
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 11/144 (7%)
Query: 172 VFLQGKRFHEALESILSPQETLKERDENLLKSGYIESVQHILK-DVSGVRALESAVQHET 230
+F RFH ++ ++L+ R +L S ++ ++++LK D + E + H T
Sbjct: 237 LFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPT 296
Query: 231 LNYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFDNPLQVVAYMGAMNHDTNYSFQVQ 290
LLD K KP ST N Q +H + S +Q
Sbjct: 297 FQTQRLLDRSPSRSAK---------RKPYHVESSTLSNRNQAGKSTALQSHHRSNSKDIQ 347
Query: 291 CGLIVVAYKD-GSPAHPHFMDAEL 313
+ + D G PA+ F++ L
Sbjct: 348 NLSVGLPRADEGLPANESFLNGNL 371
>gi|218751874 hairy and enhancer of split 6 isoform b [Homo sapiens]
Length = 222
Score = 28.9 bits (63), Expect = 7.0
Identities = 20/92 (21%), Positives = 41/92 (44%)
Query: 143 KQQVFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFHEALESILSPQETLKERDENLLK 202
K++ + E ++ +L G + E + L +R L +E L+
Sbjct: 36 KRRARINESLQELRLLLAGAEAKLENAEVLELTVRRVQGVLRGRAREREQLQAEASERFA 95
Query: 203 SGYIESVQHILKDVSGVRALESAVQHETLNYI 234
+GYI+ + + VS +A+++ V E LN++
Sbjct: 96 AGYIQCMHEVHTFVSTCQAIDATVAAELLNHL 127
>gi|211971060 G protein-coupled receptor 107 isoform 2 [Homo
sapiens]
Length = 571
Score = 28.9 bits (63), Expect = 7.0
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Query: 21 ESAALVAFSTSSYSCGRKKKVNPYEEVDQEKYSNLVQSVLSSRGVAQ--------TPGSV 72
E+A LV F + Y R NPY ++ QE+ ++SV+++ GV + T GSV
Sbjct: 503 ETATLVFFVLTGYKF-RPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSV 561
Query: 73 E 73
E
Sbjct: 562 E 562
>gi|211971058 G protein-coupled receptor 107 isoform 1 [Homo
sapiens]
Length = 600
Score = 28.9 bits (63), Expect = 7.0
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Query: 21 ESAALVAFSTSSYSCGRKKKVNPYEEVDQEKYSNLVQSVLSSRGVAQ--------TPGSV 72
E+A LV F + Y R NPY ++ QE+ ++SV+++ GV + T GSV
Sbjct: 532 ETATLVFFVLTGYKF-RPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSV 590
Query: 73 E 73
E
Sbjct: 591 E 591
>gi|56711308 G protein-coupled receptor 107 isoform 3 [Homo sapiens]
Length = 552
Score = 28.9 bits (63), Expect = 7.0
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Query: 21 ESAALVAFSTSSYSCGRKKKVNPYEEVDQEKYSNLVQSVLSSRGVAQ--------TPGSV 72
E+A LV F + Y R NPY ++ QE+ ++SV+++ GV + T GSV
Sbjct: 484 ETATLVFFVLTGYKF-RPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSV 542
Query: 73 E 73
E
Sbjct: 543 E 543
>gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo
sapiens]
Length = 2155
Score = 28.5 bits (62), Expect = 9.2
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 26/142 (18%)
Query: 86 KLPNQGEDRRVPQNWFPIFNPERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQTMTKQQ 145
++P + ED V Q+ F PE +++ + + L + PS ++ + QQ
Sbjct: 863 QIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSGHPS-----EKEIKAQQ 917
Query: 146 VFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFHEALESILSPQETLKERDENLL---- 201
L RW Q F+E R +AL S LS Q E +E
Sbjct: 918 DKLNTRWSQ----------FRELVD-------RKKDALLSALSIQNYHLECNETKSWIRE 960
Query: 202 KSGYIESVQHILKDVSGVRALE 223
K+ IES Q + D++GV AL+
Sbjct: 961 KTKVIESTQDLGNDLAGVMALQ 982
>gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo
sapiens]
Length = 2364
Score = 28.5 bits (62), Expect = 9.2
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 26/142 (18%)
Query: 86 KLPNQGEDRRVPQNWFPIFNPERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQTMTKQQ 145
++P + ED V Q+ F PE +++ + + L + PS ++ + QQ
Sbjct: 876 QIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSGHPS-----EKEIKAQQ 930
Query: 146 VFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFHEALESILSPQETLKERDENLL---- 201
L RW Q F+E R +AL S LS Q E +E
Sbjct: 931 DKLNTRWSQ----------FRELVD-------RKKDALLSALSIQNYHLECNETKSWIRE 973
Query: 202 KSGYIESVQHILKDVSGVRALE 223
K+ IES Q + D++GV AL+
Sbjct: 974 KTKVIESTQDLGNDLAGVMALQ 995
>gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens]
Length = 193
Score = 28.5 bits (62), Expect = 9.2
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 106 PERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQTMTKQQVFLLERWKQRMILELGEDGF 165
P RS P P + P ++ SV L++ Q LER KQ+M LG D
Sbjct: 34 PHRSPGPIHRRKKRPPQAPGAQDSGRSVHNELEKRRRAQLKRCLERLKQQM--PLGAD-C 90
Query: 166 KEYTSNVFLQGKRFH-EALESILSPQETLKERDENLLKSGYIESVQHILKDVSGVRALES 224
YT+ L+ R H + LE LKER L+S Q + + + +R L
Sbjct: 91 ARYTTLSLLRRARMHIQKLEDQEQRARQLKER----LRS----KQQSLQRQLEQLRGLAG 142
Query: 225 AVQHETL 231
A + E L
Sbjct: 143 AAERERL 149
>gi|13775222 MAX dimerization protein 3 isoform a [Homo sapiens]
Length = 206
Score = 28.5 bits (62), Expect = 9.2
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 106 PERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQTMTKQQVFLLERWKQRMILELGEDGF 165
P RS P P + P ++ SV L++ Q LER KQ+M LG D
Sbjct: 34 PHRSPGPIHRRKKRPPQAPGAQDSGRSVHNELEKRRRAQLKRCLERLKQQM--PLGAD-C 90
Query: 166 KEYTSNVFLQGKRFH-EALESILSPQETLKERDENLLKSGYIESVQHILKDVSGVRALES 224
YT+ L+ R H + LE LKER L+S Q + + + +R L
Sbjct: 91 ARYTTLSLLRRARMHIQKLEDQEQRARQLKER----LRS----KQQSLQRQLEQLRGLAG 142
Query: 225 AVQHETL 231
A + E L
Sbjct: 143 AAERERL 149
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,493,295
Number of Sequences: 37866
Number of extensions: 603471
Number of successful extensions: 1728
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1711
Number of HSP's gapped (non-prelim): 33
length of query: 344
length of database: 18,247,518
effective HSP length: 103
effective length of query: 241
effective length of database: 14,347,320
effective search space: 3457704120
effective search space used: 3457704120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.