TOP1MT 6690

Name: TOP1MT	Sequence: fasta or formatted (601aa)		NCBI GI: 16418461
Description: mitochondrial topoisomerase I		Referenced in: Mitochondria Replication Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 50 3 C cysteine 1.7 10 2 D aspartate 5.0 30 2 E glutamate 9.5 57 2 F phenylalanine 4.2 25 2 G glycine 5.0 30 1 H histidine 2.2 13 1 I isoleucine 3.5 21 1 K lysine 8.7 52 2 L leucine 8.7 52 2 M methionine 1.8 11 1 N asparagine 3.2 19 1 P proline 4.0 24 2 Q glutamine 4.8 29 2 R arginine 9.8 59 2 S serine 4.5 27 1 T threonine 4.5 27 3 V valine 6.3 38 2 W tryptophan 1.7 10 1 Y tyrosine 2.8 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mitochondrial topoisomerase I TOP1 0.705 DNA topoisomerase I GOLGB1 0.018 golgi autoantigen, golgin subfamily b, macrogolgin ... SMC2 0.013 structural maintenance of chromosomes 2 SMC2 0.013 structural maintenance of chromosomes 2 SMC2 0.013 structural maintenance of chromosomes 2 ANKRD20A1 0.012 ankyrin repeat domain 20 family, member A1 GBP7 0.011 guanylate binding protein 4-like ANKRD20A4 0.011 ankyrin repeat domain 20 family, member A4 MYH10 0.011 myosin, heavy polypeptide 10, non-muscle PLEC1 0.011 plectin 1 isoform 11 PLEC1 0.011 plectin 1 isoform 10 PLEC1 0.011 plectin 1 isoform 8 PLEC1 0.011 plectin 1 isoform 7 PLEC1 0.011 plectin 1 isoform 6 PLEC1 0.011 plectin 1 isoform 3 PLEC1 0.011 plectin 1 isoform 2 PLEC1 0.011 plectin 1 isoform 1 ANKRD20A3 0.010 ankyrin repeat domain 20 family, member A3 SMC3 0.010 structural maintenance of chromosomes 3 CENPE 0.010 centromere protein E ANKRD20A2 0.010 ankyrin repeat domain 20 family, member A2 HOMER3 0.010 Homer, neuronal immediate early gene, 3 isoform 2 [... CNTROB 0.010 centrobin, centrosomal BRCA2 interacting protein is... CNTROB 0.010 centrobin, centrosomal BRCA2 interacting protein iso... GOLGA8B 0.010 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.010 golgi autoantigen, golgin subfamily a, 8A LOC283685 0.010 PREDICTED: golgi autoantigen, golgin subfamily a-li... MCM10 0.010 minichromosome maintenance complex component 10 isof... CROCC 0.010 ciliary rootlet coiled-coil Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.