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Search of human proteins with 163965362
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|163965362 nascent polypeptide-associated complex alpha
subunit isoform b [Homo sapiens]
(215 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|163965362 nascent polypeptide-associated complex alpha subuni... 406 e-114
gi|5031931 nascent polypeptide-associated complex alpha subunit ... 406 e-114
gi|163965364 nascent polypeptide-associated complex alpha subuni... 406 e-114
gi|40548328 nascent-polypeptide-associated complex alpha polypep... 366 e-102
gi|163965366 nascent polypeptide-associated complex alpha subuni... 365 e-101
gi|226437579 NAC alpha domain containing [Homo sapiens] 243 7e-65
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 243 7e-65
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 243 7e-65
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 243 7e-65
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 243 7e-65
gi|83641885 basic transcription factor 3 isoform A [Homo sapiens] 47 1e-05
gi|27734984 chromosome 15 open reading frame 63 [Homo sapiens] 44 1e-04
gi|4759082 serum deprivation response protein [Homo sapiens] 40 0.001
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 39 0.003
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 39 0.003
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|194097365 FtsJ homolog 3 [Homo sapiens] 39 0.003
gi|20070130 basic transcription factor 3 isoform B [Homo sapiens] 39 0.003
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 37 0.010
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 37 0.010
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 37 0.013
gi|4503579 erythrocyte membrane protein band 4.1-like 2 isoform ... 36 0.022
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa... 35 0.037
gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo sa... 35 0.037
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 35 0.063
>gi|163965362 nascent polypeptide-associated complex alpha subunit
isoform b [Homo sapiens]
Length = 215
Score = 406 bits (1044), Expect = e-114
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID 60
MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID
Sbjct: 1 MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID 60
Query: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 121 IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD 180
IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD
Sbjct: 121 IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD 180
Query: 181 IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
Sbjct: 181 IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
>gi|5031931 nascent polypeptide-associated complex alpha subunit
isoform b [Homo sapiens]
Length = 215
Score = 406 bits (1044), Expect = e-114
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID 60
MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID
Sbjct: 1 MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID 60
Query: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 121 IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD 180
IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD
Sbjct: 121 IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD 180
Query: 181 IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
Sbjct: 181 IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
>gi|163965364 nascent polypeptide-associated complex alpha subunit
isoform b [Homo sapiens]
Length = 215
Score = 406 bits (1044), Expect = e-114
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID 60
MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID
Sbjct: 1 MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID 60
Query: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 121 IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD 180
IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD
Sbjct: 121 IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD 180
Query: 181 IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
Sbjct: 181 IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
>gi|40548328 nascent-polypeptide-associated complex alpha
polypeptide-like [Homo sapiens]
Length = 215
Score = 366 bits (939), Expect = e-102
Identities = 194/215 (90%), Positives = 202/215 (93%)
Query: 1 MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEID 60
MPGEATETVPATEQELPQ QAETGSGT SDS ESVP +EEQDSTQ TTQ+A L AAAEID
Sbjct: 1 MPGEATETVPATEQELPQSQAETGSGTASDSGESVPGIEEQDSTQTTTQKAWLVAAAEID 60
Query: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
EEPV KAKQSRSEK+ARKAMSKLGL QVTGVTRVTI KSKNILFVITK DVYKSPASD Y
Sbjct: 61 EEPVGKAKQSRSEKRARKAMSKLGLLQVTGVTRVTIWKSKNILFVITKLDVYKSPASDAY 120
Query: 121 IVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKD 180
IVFGEAKI+DLSQQAQLAAAEKF+VQGEAV NIQENTQTPTVQEESEEEEVDETGVEVKD
Sbjct: 121 IVFGEAKIQDLSQQAQLAAAEKFRVQGEAVGNIQENTQTPTVQEESEEEEVDETGVEVKD 180
Query: 181 IELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
++LVMSQANVSRAKAVRALKNNSNDIVNAIMELT+
Sbjct: 181 VKLVMSQANVSRAKAVRALKNNSNDIVNAIMELTV 215
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 365 bits (938), Expect = e-101
Identities = 197/214 (92%), Positives = 199/214 (92%)
Query: 2 PGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDE 61
P A VP + P + GSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDE
Sbjct: 1865 PKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDE 1924
Query: 62 EPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYI 121
EPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYI
Sbjct: 1925 EPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYI 1984
Query: 122 VFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDI 181
VFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDI
Sbjct: 1985 VFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDI 2044
Query: 182 ELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
ELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
Sbjct: 2045 ELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 2078
Score = 50.4 bits (119), Expect = 1e-06
Identities = 23/23 (100%), Positives = 23/23 (100%)
Query: 1 MPGEATETVPATEQELPQPQAET 23
MPGEATETVPATEQELPQPQAET
Sbjct: 1 MPGEATETVPATEQELPQPQAET 23
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 243 bits (621), Expect = 7e-65
Identities = 139/219 (63%), Positives = 162/219 (73%), Gaps = 10/219 (4%)
Query: 4 EATETVPATEQELPQPQAETGSGTESDSD-ESVPELEEQDSTQATTQQAQLAAAAEIDEE 62
E E + E++ P+ GSG SDS ES EL+EQD T Q A A EE
Sbjct: 1347 EQQEDEDSLEEDSPRA---LGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEE 1403
Query: 63 PVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIV 122
++KAKQSRSEKKARKAMSKLGLRQ+ GVTR+TI+KSKNILFVI KPDV+KSPASDTY+V
Sbjct: 1404 TIAKAKQSRSEKKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVV 1463
Query: 123 FGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTV------QEESEEEEVDETGV 176
FGEAKIEDLSQQ AAAEKFKV E + + E+ P V +EE EEEEVDE G+
Sbjct: 1464 FGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGL 1523
Query: 177 EVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
E++DIELVM+QANVSRAKAVRAL++N +DIVNAIMELTM
Sbjct: 1524 ELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELTM 1562
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 243 bits (621), Expect = 7e-65
Identities = 139/219 (63%), Positives = 162/219 (73%), Gaps = 10/219 (4%)
Query: 4 EATETVPATEQELPQPQAETGSGTESDSD-ESVPELEEQDSTQATTQQAQLAAAAEIDEE 62
E E + E++ P+ GSG SDS ES EL+EQD T Q A A EE
Sbjct: 1307 EQQEDEDSLEEDSPRA---LGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEE 1363
Query: 63 PVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIV 122
++KAKQSRSEKKARKAMSKLGLRQ+ GVTR+TI+KSKNILFVI KPDV+KSPASDTY+V
Sbjct: 1364 TIAKAKQSRSEKKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVV 1423
Query: 123 FGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTV------QEESEEEEVDETGV 176
FGEAKIEDLSQQ AAAEKFKV E + + E+ P V +EE EEEEVDE G+
Sbjct: 1424 FGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGL 1483
Query: 177 EVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
E++DIELVM+QANVSRAKAVRAL++N +DIVNAIMELTM
Sbjct: 1484 ELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELTM 1522
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 243 bits (621), Expect = 7e-65
Identities = 139/219 (63%), Positives = 162/219 (73%), Gaps = 10/219 (4%)
Query: 4 EATETVPATEQELPQPQAETGSGTESDSD-ESVPELEEQDSTQATTQQAQLAAAAEIDEE 62
E E + E++ P+ GSG SDS ES EL+EQD T Q A A EE
Sbjct: 1307 EQQEDEDSLEEDSPRA---LGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEE 1363
Query: 63 PVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIV 122
++KAKQSRSEKKARKAMSKLGLRQ+ GVTR+TI+KSKNILFVI KPDV+KSPASDTY+V
Sbjct: 1364 TIAKAKQSRSEKKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVV 1423
Query: 123 FGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTV------QEESEEEEVDETGV 176
FGEAKIEDLSQQ AAAEKFKV E + + E+ P V +EE EEEEVDE G+
Sbjct: 1424 FGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGL 1483
Query: 177 EVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
E++DIELVM+QANVSRAKAVRAL++N +DIVNAIMELTM
Sbjct: 1484 ELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELTM 1522
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 243 bits (621), Expect = 7e-65
Identities = 139/219 (63%), Positives = 162/219 (73%), Gaps = 10/219 (4%)
Query: 4 EATETVPATEQELPQPQAETGSGTESDSD-ESVPELEEQDSTQATTQQAQLAAAAEIDEE 62
E E + E++ P+ GSG SDS ES EL+EQD T Q A A EE
Sbjct: 1347 EQQEDEDSLEEDSPRA---LGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEE 1403
Query: 63 PVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIV 122
++KAKQSRSEKKARKAMSKLGLRQ+ GVTR+TI+KSKNILFVI KPDV+KSPASDTY+V
Sbjct: 1404 TIAKAKQSRSEKKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVV 1463
Query: 123 FGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTV------QEESEEEEVDETGV 176
FGEAKIEDLSQQ AAAEKFKV E + + E+ P V +EE EEEEVDE G+
Sbjct: 1464 FGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGL 1523
Query: 177 EVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
E++DIELVM+QANVSRAKAVRAL++N +DIVNAIMELTM
Sbjct: 1524 ELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELTM 1562
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 243 bits (621), Expect = 7e-65
Identities = 139/219 (63%), Positives = 162/219 (73%), Gaps = 10/219 (4%)
Query: 4 EATETVPATEQELPQPQAETGSGTESDSD-ESVPELEEQDSTQATTQQAQLAAAAEIDEE 62
E E + E++ P+ GSG SDS ES EL+EQD T Q A A EE
Sbjct: 1307 EQQEDEDSLEEDSPRA---LGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEE 1363
Query: 63 PVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIV 122
++KAKQSRSEKKARKAMSKLGLRQ+ GVTR+TI+KSKNILFVI KPDV+KSPASDTY+V
Sbjct: 1364 TIAKAKQSRSEKKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVV 1423
Query: 123 FGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTV------QEESEEEEVDETGV 176
FGEAKIEDLSQQ AAAEKFKV E + + E+ P V +EE EEEEVDE G+
Sbjct: 1424 FGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGL 1483
Query: 177 EVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
E++DIELVM+QANVSRAKAVRAL++N +DIVNAIMELTM
Sbjct: 1484 ELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELTM 1522
>gi|83641885 basic transcription factor 3 isoform A [Homo sapiens]
Length = 206
Score = 47.0 bits (110), Expect = 1e-05
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 10/179 (5%)
Query: 3 GEATETVPATEQELPQPQAETGS-GTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDE 61
G A P E L QP G+ G E E++ E+ QA + A +
Sbjct: 16 GRARGGCPGGEATLSQPPPRGGTRGQEPQMKETIMNQEKLAKLQAQVRIGGKGTARR--K 73
Query: 62 EPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYI 121
+ V + +KK + ++ KLG+ ++G+ V + ++ + P V S A++T+
Sbjct: 74 KKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFT 133
Query: 122 VFGEAKIEDLSQQA-----QLAAAEKFKVQ--GEAVSNIQENTQTPTVQEESEEEEVDE 173
+ G A+ + L++ QL A ++ EA+ + + P E +++EV +
Sbjct: 134 ITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAPLATGEDDDDEVPD 192
>gi|27734984 chromosome 15 open reading frame 63 [Homo sapiens]
Length = 129
Score = 43.5 bits (101), Expect = 1e-04
Identities = 23/91 (25%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 124 GEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIEL 183
G A +E ++ A+ + ++ A+S I + ++ E+E+ + ++ +D+EL
Sbjct: 39 GAADLERVTDYAEEKEIQSSNLE-TAMSVIGDRRSREQKAKQEREKELAKVTIKKEDLEL 97
Query: 184 VMSQANVSRAKAVRALKNNSNDIVNAIMELT 214
+M++ +SRA A R+L+ + ++V A++ LT
Sbjct: 98 IMTEMEISRAAAERSLREHMGNVVEALIALT 128
>gi|4759082 serum deprivation response protein [Homo sapiens]
Length = 425
Score = 40.0 bits (92), Expect = 0.001
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 19/208 (9%)
Query: 13 EQELPQPQA---ETGSGTESDSDESVPELEE--QDSTQATTQQAQLAAAAEIDEEPVSKA 67
++ELP ET + SD+ +P EE +DS + ++++ + V
Sbjct: 183 KEELPDENKSLEETLHTVDLSSDDDLPHDEEALEDSAEEKVEESRAEKIKRSSLKKVDSL 242
Query: 68 KQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAK 127
K++ S + K M+KLG + V+ R I+KS SP + + FG K
Sbjct: 243 KKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLTSNHQKISSG-KSSPFKVSPLTFGRKK 301
Query: 128 IEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQ 187
+ + A+ + ++ + Q P QEE E G + + +
Sbjct: 302 VREGESHAENETKSE---------DLPSSEQMPNDQEEESFAE----GHSEASLASALVE 348
Query: 188 ANVSRAKAVRALKNNSNDIVNAIMELTM 215
++ A +A SN +++ ++LT+
Sbjct: 349 GEIAEEAAEKATSRGSNSGMDSNIDLTI 376
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 13 EQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRS 72
E+E + + E GS +E +E E EE++ T + +++A +A E+ EE +S+ ++ +
Sbjct: 281 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEEREN 340
Query: 73 E 73
E
Sbjct: 341 E 341
Score = 30.8 bits (68), Expect = 0.91
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 3 GEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQ 45
G +E E+E + + ETGS +E S++S E+ E++ ++
Sbjct: 292 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSE 334
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 13 EQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRS 72
E+E + + E GS +E +E E EE++ T + +++A +A E+ EE +S+ ++ +
Sbjct: 291 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEEREN 350
Query: 73 E 73
E
Sbjct: 351 E 351
Score = 30.8 bits (68), Expect = 0.91
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 3 GEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQ 45
G +E E+E + + ETGS +E S++S E+ E++ ++
Sbjct: 302 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSE 344
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 13 EQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRS 72
E+E + + E GS +E +E E EE++ T + +++A +A E+ EE +S+ ++ +
Sbjct: 282 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEEREN 341
Query: 73 E 73
E
Sbjct: 342 E 342
Score = 30.8 bits (68), Expect = 0.91
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 3 GEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQ 45
G +E E+E + + ETGS +E S++S E+ E++ ++
Sbjct: 293 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSE 335
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 13 EQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRS 72
E+E + + E GS +E +E E EE++ T + +++A +A E+ EE +S+ ++ +
Sbjct: 291 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEEREN 350
Query: 73 E 73
E
Sbjct: 351 E 351
Score = 30.8 bits (68), Expect = 0.91
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 3 GEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQ 45
G +E E+E + + ETGS +E S++S E+ E++ ++
Sbjct: 302 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSE 344
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 13 EQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRS 72
E+E + + E GS +E +E E EE++ T + +++A +A E+ EE +S+ ++ +
Sbjct: 259 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEEREN 318
Query: 73 E 73
E
Sbjct: 319 E 319
Score = 30.8 bits (68), Expect = 0.91
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 3 GEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQ 45
G +E E+E + + ETGS +E S++S E+ E++ ++
Sbjct: 270 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSE 312
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 13 EQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRS 72
E+E + + E GS +E +E E EE++ T + +++A +A E+ EE +S+ ++ +
Sbjct: 248 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEEREN 307
Query: 73 E 73
E
Sbjct: 308 E 308
Score = 30.8 bits (68), Expect = 0.91
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 3 GEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQ 45
G +E E+E + + ETGS +E S++S E+ E++ ++
Sbjct: 259 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSE 301
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins)
isoform 3 [Homo sapiens]
Length = 526
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 13 EQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRS 72
E+E + + E GS +E +E E EE++ T + +++A +A E+ EE +S+ ++ +
Sbjct: 37 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEEREN 96
Query: 73 E 73
E
Sbjct: 97 E 97
Score = 30.8 bits (68), Expect = 0.91
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 3 GEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQ 45
G +E E+E + + ETGS +E S++S E+ E++ ++
Sbjct: 48 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSE 90
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 13 EQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRS 72
E+E + + E GS +E +E E EE++ T + +++A +A E+ EE +S+ ++ +
Sbjct: 293 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEEREN 352
Query: 73 E 73
E
Sbjct: 353 E 353
Score = 30.8 bits (68), Expect = 0.91
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 3 GEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQ 45
G +E E+E + + ETGS +E S++S E+ E++ ++
Sbjct: 304 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSE 346
>gi|194097365 FtsJ homolog 3 [Homo sapiens]
Length = 847
Score = 39.3 bits (90), Expect = 0.003
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 19/173 (10%)
Query: 13 EQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRS 72
E++ + T T+ S E E EE+ Q + A E+ E K K R
Sbjct: 338 EEDEGDEEDSTAGTTKQPSKEEEEEEEEEQLNQTLAEMK----AQEVAELKRKKKKLLRE 393
Query: 73 EKKARKAMS-KLGLRQV-------TGVTRVTIRKSKNILFVITKPDVYKS-------PAS 117
++K R+ + K+ L V TG+ ++ + +L +T+ D+ + P
Sbjct: 394 QRKQRERVELKMDLPGVSIADEGETGMFSLSTIRGHQLLEEVTQGDMSAADTFLSDLPRD 453
Query: 118 DTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEE 170
D Y+ E +D S + L E V+G Q+ + VQ++ EEEE
Sbjct: 454 DIYVSDVEDDGDDTSLDSDLDPEELAGVRGHQGLRDQKRMRLTEVQDDKEEEE 506
>gi|20070130 basic transcription factor 3 isoform B [Homo sapiens]
Length = 162
Score = 38.9 bits (89), Expect = 0.003
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
Query: 51 AQLAAAAEIDEEPVSKAKQ-------SRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNIL 103
A+L A I + ++ K+ + +KK + ++ KLG+ ++G+ V + ++ +
Sbjct: 12 AKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTV 71
Query: 104 FVITKPDVYKSPASDTYIVFGEAKIEDLSQQA-----QLAAAEKFKVQ--GEAVSNIQEN 156
P V S A++T+ + G A+ + L++ QL A ++ EA+ +
Sbjct: 72 IHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD 131
Query: 157 TQTPTVQEESEEEEVDE 173
+ P E +++EV +
Sbjct: 132 GKAPLATGEDDDDEVPD 148
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 37.4 bits (85), Expect = 0.010
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 1 MPGEATETV---------PATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQA 51
MP E E V P T+ P +++ S + SDSD S + EE+ + + Q
Sbjct: 457 MPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQE 516
Query: 52 QLAAA----AEIDEEPVSKAKQSRSEKKARK 78
QL A A + + +K K+ +KK +K
Sbjct: 517 QLKAVHEQLAALSQPQQNKPKKKEKDKKEKK 547
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 37.4 bits (85), Expect = 0.010
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 1 MPGEATETV---------PATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQA 51
MP E E V P T+ P +++ S + SDSD S + EE+ + + Q
Sbjct: 457 MPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQE 516
Query: 52 QLAAA----AEIDEEPVSKAKQSRSEKKARK 78
QL A A + + +K K+ +KK +K
Sbjct: 517 QLKAVHEQLAALSQPQQNKPKKKEKDKKEKK 547
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 37.0 bits (84), Expect = 0.013
Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 21/199 (10%)
Query: 4 EATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEP 63
EA E A + E+ Q Q + + + SV TQA ++A+L+ E +
Sbjct: 607 EALEKEKAAKLEILQQQLQVANEARDSAQTSV--------TQAQREKAELSRKVEELQAC 658
Query: 64 VSKAKQSRSEKKARKAMSKLGLR--QVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYI 121
V A+Q + E +A+ A +L LR Q + + + K+ L + ++ +
Sbjct: 659 VETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQL-----QEQLQALKESLKV 713
Query: 122 VFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDI 181
G ++ + AA+ + Q +S ++ T++ Q + E +E++E K +
Sbjct: 714 TKGSL------EEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGL 767
Query: 182 ELVMSQANVSRAKAVRALK 200
E + Q + L+
Sbjct: 768 EARLQQLGEAHQAETEVLR 786
>gi|4503579 erythrocyte membrane protein band 4.1-like 2 isoform a
[Homo sapiens]
Length = 1005
Score = 36.2 bits (82), Expect = 0.022
Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 17/183 (9%)
Query: 2 PGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDE 61
PGE + P T+++ +E+ S + +E V E T + + E++E
Sbjct: 720 PGEIRKVEPVTQKDSTSLSSESSSSSSESEEEDVGEYRPHHRVTEGTIREEQEYEEEVEE 779
Query: 62 EPVSKAKQSRSEKKARKA--MSKLGLRQVTGVTRV-------TIRKSKNILFVITKPDVY 112
EP AK E+ +A +++ G +T T + I K++ K D+
Sbjct: 780 EPRPAAKVVEREEAVPEASPVTQAGASVITVETVIQENVGAQKIPGEKSVHEGALKQDMG 839
Query: 113 KSPASDTYIVFGEAKIEDLSQQAQLAAAEK---FKVQGEAVSNIQENT-----QTPTVQE 164
+ + V GE D+ Q+ + K + +S+ + T + P VQ
Sbjct: 840 EEAEEEPQKVNGEVSHVDIDVLPQIICCSEPPVVKTEMVTISDASQRTEISTKEVPIVQT 899
Query: 165 ESE 167
E++
Sbjct: 900 ETK 902
>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
sapiens]
Length = 1782
Score = 35.4 bits (80), Expect = 0.037
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 33/201 (16%)
Query: 4 EATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEE- 62
E TE V A Q P + + + VP++EEQ + TQ+ A A ++ EE
Sbjct: 998 ETTEMVSAVSQLTDSPDTTEEATPVQEVEGGVPDIEEQ---ERRTQEVLQAVAEKVKEES 1054
Query: 63 -------------PVSKAKQSRSEKKARKAMSKLGLRQVTGVT-RVTIRKSKNILFV--- 105
PV +A+ R E++A + GL++ T V +V +++K F
Sbjct: 1055 QLPGTGGPEDVLQPVQRAEAERPEEQAEAS----GLKKETDVVLKVDAQEAKTEPFTQGK 1110
Query: 106 ---ITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTV 162
T P+ ++ T + + + + V +A+ ++ +TPT
Sbjct: 1111 VVGQTTPESFEKAPQVTESIESSELVTTCQAETLAGVKSQEMVMEQAIP--PDSVETPTD 1168
Query: 163 QEESEEEEV---DETGVEVKD 180
E V D G KD
Sbjct: 1169 SETDGSTPVADFDAPGTTQKD 1189
Score = 31.2 bits (69), Expect = 0.70
Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 1 MPGEATETVPATEQELPQPQAETGSGTESDSD-ESVPELEEQDSTQATTQQAQLAAAAEI 59
+PG + +++ P A E DSD +V L E D+ + +AQ A +
Sbjct: 811 IPGRRKKRPDGKQEQAPVEDAGPTGANEDDSDVPAVVPLSEYDAVEREKMEAQQAQKSA- 869
Query: 60 DEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFV---ITKP 109
E+P KA S++ + + + G TI + ++ ++ +T+P
Sbjct: 870 -EQPEQKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEP 921
Score = 27.7 bits (60), Expect = 7.7
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 27 TESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKL 83
+E + V + + QD+ Q T ++ + A+ DE P++ AK+ +A S +
Sbjct: 1574 SELQTQAHVIKADSQDAGQETEKEGEEPQASAQDETPITSAKEESESTAVGQAHSDI 1630
>gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo
sapiens]
Length = 1684
Score = 35.4 bits (80), Expect = 0.037
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 33/201 (16%)
Query: 4 EATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEE- 62
E TE V A Q P + + + VP++EEQ + TQ+ A A ++ EE
Sbjct: 900 ETTEMVSAVSQLTDSPDTTEEATPVQEVEGGVPDIEEQ---ERRTQEVLQAVAEKVKEES 956
Query: 63 -------------PVSKAKQSRSEKKARKAMSKLGLRQVTGVT-RVTIRKSKNILFV--- 105
PV +A+ R E++A + GL++ T V +V +++K F
Sbjct: 957 QLPGTGGPEDVLQPVQRAEAERPEEQAEAS----GLKKETDVVLKVDAQEAKTEPFTQGK 1012
Query: 106 ---ITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTV 162
T P+ ++ T + + + + V +A+ ++ +TPT
Sbjct: 1013 VVGQTTPESFEKAPQVTESIESSELVTTCQAETLAGVKSQEMVMEQAIP--PDSVETPTD 1070
Query: 163 QEESEEEEV---DETGVEVKD 180
E V D G KD
Sbjct: 1071 SETDGSTPVADFDAPGTTQKD 1091
Score = 31.2 bits (69), Expect = 0.70
Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 1 MPGEATETVPATEQELPQPQAETGSGTESDSD-ESVPELEEQDSTQATTQQAQLAAAAEI 59
+PG + +++ P A E DSD +V L E D+ + +AQ A +
Sbjct: 713 IPGRRKKRPDGKQEQAPVEDAGPTGANEDDSDVPAVVPLSEYDAVEREKMEAQQAQKSA- 771
Query: 60 DEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFV---ITKP 109
E+P KA S++ + + + G TI + ++ ++ +T+P
Sbjct: 772 -EQPEQKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEP 823
Score = 27.7 bits (60), Expect = 7.7
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 27 TESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKL 83
+E + V + + QD+ Q T ++ + A+ DE P++ AK+ +A S +
Sbjct: 1476 SELQTQAHVIKADSQDAGQETEKEGEEPQASAQDETPITSAKEESESTAVGQAHSDI 1532
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 34.7 bits (78), Expect = 0.063
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 8/183 (4%)
Query: 2 PGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDE 61
P VPA LP +A + S S+ES + +E+D + Q+ + A+ +
Sbjct: 100 PPAKKAAVPAKRVGLPPGKAAAKASESSSSEESSDDDDEEDQKKQPVQKG-VKPQAKAAK 158
Query: 62 EPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNI--LFVITKPDVYKSPASDT 119
P KAK S S+ + + + Q +T VT++ P + A+ +
Sbjct: 159 APPKKAKSSDSDSDS-SSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASS 217
Query: 120 YIVFGEAKIEDLSQQAQLAAAEKF---KVQGEAVSNIQENTQTPTVQEESEEEEVDETGV 176
+ D S++ + AA K K Q A + ++ T TPT + S E+ +
Sbjct: 218 SSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAAT-TPTRKSSSSEDSSSDEEE 276
Query: 177 EVK 179
E K
Sbjct: 277 EQK 279
Score = 29.6 bits (65), Expect = 2.0
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 16 LPQPQAETGS-GTESDSDESVPELEEQ-DSTQATTQQAQLAAAAEIDEEPVSKAKQSRSE 73
LP QA GS + SDSD S E EE+ S A ++ Q A +P S AK+ ++E
Sbjct: 457 LPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPAS-AKKGKAE 515
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.301 0.118 0.293
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,977,660
Number of Sequences: 37866
Number of extensions: 291686
Number of successful extensions: 2979
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 2414
Number of HSP's gapped (non-prelim): 686
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.