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Search of human proteins with 16357477
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]
(236 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens] 493 e-140
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] 400 e-112
gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens] 172 2e-43
gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo s... 149 2e-36
gi|33359701 ubiquitin-conjugating enzyme E2G 2 isoform 2 [Homo s... 140 1e-33
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 110 8e-25
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 109 2e-24
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 102 3e-22
gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens] 95 6e-20
gi|35493996 ubiquitin-conjugating enzyme E2I [Homo sapiens] 95 6e-20
gi|35493987 ubiquitin-conjugating enzyme E2I [Homo sapiens] 95 6e-20
gi|4507785 ubiquitin-conjugating enzyme E2I [Homo sapiens] 95 6e-20
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 94 1e-19
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 93 2e-19
gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo sa... 91 9e-19
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens] 90 1e-18
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 90 2e-18
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi... 89 3e-18
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 89 3e-18
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 89 3e-18
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 89 3e-18
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 89 3e-18
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 89 3e-18
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 89 3e-18
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 89 3e-18
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 89 3e-18
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 89 3e-18
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa... 89 3e-18
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 87 1e-17
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens] 87 2e-17
>gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]
Length = 236
Score = 493 bits (1269), Expect = e-140
Identities = 236/236 (100%), Positives = 236/236 (100%)
Query: 1 MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKA 60
MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKA
Sbjct: 1 MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKA 60
Query: 61 RLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNV 120
RLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNV
Sbjct: 61 RLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNV 120
Query: 121 RTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDG 180
RTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDG
Sbjct: 121 RTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDG 180
Query: 181 VKVPTTLAEYCVKTKAPAPDEGSDLFYDDYYEDGEVEEEADSCFGDDEDDSGTEES 236
VKVPTTLAEYCVKTKAPAPDEGSDLFYDDYYEDGEVEEEADSCFGDDEDDSGTEES
Sbjct: 181 VKVPTTLAEYCVKTKAPAPDEGSDLFYDDYYEDGEVEEEADSCFGDDEDDSGTEES 236
>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
Length = 238
Score = 400 bits (1027), Expect = e-112
Identities = 193/241 (80%), Positives = 211/241 (87%), Gaps = 8/241 (3%)
Query: 1 MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKA 60
MA+ + SSQKAL+LELK LQEEPVEGFR+TLVDE DLYNWEVAIFGPPNT YEGGYFKA
Sbjct: 1 MAQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKA 60
Query: 61 RLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNV 120
+KFPIDYPYSPP FRFLTKMWHPNIYE GDVCISILHPPVDDPQSGELPSERWNPTQNV
Sbjct: 61 HIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNV 120
Query: 121 RTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDG 180
RTILLSVISLLNEPNTFSPANVDASVM+RKW++SKGKD+EY +IIRKQV TK +AE+DG
Sbjct: 121 RTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDG 180
Query: 181 VKVPTTLAEYCVKTKAPAPDEGSDLFYDDYYED-----GEVEEEADSCFGDDEDDSGTEE 235
VKVPTTLAEYC+KTK P+ D SDL YDD Y+D E EE+AD C+ D+DDSG EE
Sbjct: 181 VKVPTTLAEYCIKTKVPSNDNSSDLLYDDLYDDDIDDEDEEEEDAD-CY--DDDDSGNEE 237
Query: 236 S 236
S
Sbjct: 238 S 238
>gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]
Length = 170
Score = 172 bits (436), Expect = 2e-43
Identities = 85/162 (52%), Positives = 109/162 (67%), Gaps = 7/162 (4%)
Query: 10 QKALLL--ELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPID 67
Q ALLL +L L + PVEGF L+D+ DLY WEV I GPP+T YEGG FKA L FP D
Sbjct: 5 QSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKD 64
Query: 68 YPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSV 127
YP PP +F+T++WHPN+ + GDVCISILH P +D E P ERW P V TI++SV
Sbjct: 65 YPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISV 124
Query: 128 ISLLNEPNTFSPANVDASVMYRKWKESKGKD--REYTDIIRK 167
IS+L +PN SPANVDA+ ++W+E + + R+ +RK
Sbjct: 125 ISMLADPNGDSPANVDAA---KEWREDRNGEFKRKVARCVRK 163
>gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo
sapiens]
Length = 165
Score = 149 bits (376), Expect = 2e-36
Identities = 80/160 (50%), Positives = 98/160 (61%), Gaps = 7/160 (4%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K L+ E K L P EG ++E + + WE I GP +T +E G F A L FP+DYP
Sbjct: 7 KRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPL 66
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
SPP RF +M+HPNIY G VCISILH P DDP E +ERW+P Q+V ILLSV+S+
Sbjct: 67 SPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSM 126
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVL 170
L EPN S ANVDAS M+R DRE I KQ++
Sbjct: 127 LAEPNDESGANVDASKMWR-------DDREQFYKIAKQIV 159
>gi|33359701 ubiquitin-conjugating enzyme E2G 2 isoform 2 [Homo
sapiens]
Length = 137
Score = 140 bits (352), Expect = 1e-33
Identities = 72/138 (52%), Positives = 89/138 (64%), Gaps = 7/138 (5%)
Query: 33 VDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDV 92
++E + + WE I GP +T +E G F A L FP+DYP SPP RF +M+HPNIY G V
Sbjct: 1 MNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRV 60
Query: 93 CISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWK 152
CISILH P DDP E +ERW+P Q+V ILLSV+S+L EPN S ANVDAS M+R
Sbjct: 61 CISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWR--- 117
Query: 153 ESKGKDREYTDIIRKQVL 170
DRE I KQ++
Sbjct: 118 ----DDREQFYKIAKQIV 131
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 110 bits (276), Expect = 8e-25
Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
Query: 9 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDY 68
+++ L+ + K LQE+P G E ++ W IFGP T +E G FK ++F +Y
Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGA-PSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEY 63
Query: 69 PYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVI 128
P PP RFL+KM+HPN+Y G +C+ IL RW+PT +V +IL S+
Sbjct: 64 PNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQ 110
Query: 129 SLLNEPNTFSPANVDASVMYRKWKESKGK 157
SLL+EPN SPAN A+ +Y++ K K
Sbjct: 111 SLLDEPNPNSPANSQAAQLYQENKREYEK 139
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 109 bits (273), Expect = 2e-24
Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
Query: 9 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDY 68
+++ L+ + K LQE+P G E ++ W IFGP T +E G FK ++F +Y
Sbjct: 5 ARRRLMRDFKRLQEDPPAGVSGA-PSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEY 63
Query: 69 PYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVI 128
P PP RF++KM+HPN+Y G +C+ IL RW+PT +V +IL S+
Sbjct: 64 PNKPPTVRFVSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQ 110
Query: 129 SLLNEPNTFSPANVDASVMYRKWKESKGK 157
SLL+EPN SPAN A+ +Y++ K K
Sbjct: 111 SLLDEPNPNSPANSQAAQLYQENKREYEK 139
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 102 bits (254), Expect = 3e-22
Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL LQ +P V + DL++W+ I GPP++ Y+GG F + FP DYP+
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F TK++HPNI G +C+ IL +W+P V +LLS+ SL
Sbjct: 63 KPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGKD-REYT 162
L +PN P D + +Y+ KE + RE+T
Sbjct: 110 LCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWT 142
>gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 94.7 bits (234), Expect = 6e-20
Identities = 48/112 (42%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 37 DLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISI 96
+L NWE AI G T +EGG FK R+ F DYP SPP +F ++HPN+Y +G VC+SI
Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96
Query: 97 LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMY 148
L D W P ++ ILL + LLNEPN PA +A +Y
Sbjct: 97 LEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIY 137
>gi|35493996 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 94.7 bits (234), Expect = 6e-20
Identities = 48/112 (42%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 37 DLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISI 96
+L NWE AI G T +EGG FK R+ F DYP SPP +F ++HPN+Y +G VC+SI
Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96
Query: 97 LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMY 148
L D W P ++ ILL + LLNEPN PA +A +Y
Sbjct: 97 LEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIY 137
>gi|35493987 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 94.7 bits (234), Expect = 6e-20
Identities = 48/112 (42%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 37 DLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISI 96
+L NWE AI G T +EGG FK R+ F DYP SPP +F ++HPN+Y +G VC+SI
Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96
Query: 97 LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMY 148
L D W P ++ ILL + LLNEPN PA +A +Y
Sbjct: 97 LEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIY 137
>gi|4507785 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 94.7 bits (234), Expect = 6e-20
Identities = 48/112 (42%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 37 DLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISI 96
+L NWE AI G T +EGG FK R+ F DYP SPP +F ++HPN+Y +G VC+SI
Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96
Query: 97 LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMY 148
L D W P ++ ILL + LLNEPN PA +A +Y
Sbjct: 97 LEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIY 137
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 93.6 bits (231), Expect = 1e-19
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL LQ +P V + DL++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRIQKELTDLQRDPPAQCSAGPVGD-DLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F TK++HPNI G +C+ IL +W+P V +LLS+ SL
Sbjct: 63 KPPKVAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
L +PN P + + Y+ +E + RE+T
Sbjct: 110 LCDPNPDDPLVPEIAHTYKADREKYNRLAREWT 142
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 93.2 bits (230), Expect = 2e-19
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 8 SSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPID 67
S++K L EL L +P V + D+++W+ I GP ++ Y+GG F + FP D
Sbjct: 3 SNRKCLSKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTD 61
Query: 68 YPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSV 127
YP+ PP F T+++HPNI G +C+ IL +W+P + +LLS+
Sbjct: 62 YPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSI 108
Query: 128 ISLLNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
SLL +PN P + + +Y+ ++ + RE+T
Sbjct: 109 CSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWT 144
>gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo
sapiens]
Length = 154
Score = 90.9 bits (224), Expect = 9e-19
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 8 SSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPID 67
++ + L+ EL+ +++ ++ FR VDE +L W+ I P N Y+ G F+ + FP +
Sbjct: 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAE 60
Query: 68 YPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSV 127
YP+ PP F TK++HPNI E G VC+ + + +E W P ++ S+
Sbjct: 61 YPFKPPKITFKTKIYHPNIDEKGQVCLPV------------ISAENWKPATKTDQVIQSL 108
Query: 128 ISLLNEPNTFSPANVDASVMYRKWKESKGKDRE 160
I+L+N+P P D + Y K ++ K+ E
Sbjct: 109 IALVNDPQPEHPLRADLAEEYSKDRKKFCKNAE 141
>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
Length = 152
Score = 90.1 bits (222), Expect = 1e-18
Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 17/147 (11%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
+ ++ E + L EPV G + DE + + V I GP ++ +EGG FK L P +YP
Sbjct: 6 RRIIKETQRLLAEPVPGIKAE-PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPM 64
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
+ P RF+TK++HPN+ + G +C+ IL ++W+P +RT+LLS+ +L
Sbjct: 65 AAPKVRFMTKIYHPNVDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQAL 111
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK 157
L+ PN P D + +WK ++ +
Sbjct: 112 LSAPNPDDPLANDVA---EQWKTNEAQ 135
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 89.7 bits (221), Expect = 2e-18
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRIHKELNDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI G +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
L +PN P + + +Y+ +E + RE+T
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDREKYNRIAREWT 142
>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
sapiens]
Length = 179
Score = 89.4 bits (220), Expect = 3e-18
Identities = 49/136 (36%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 34 DEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVC 93
+ +L+ W I G T YE +K L+FP YPY+ P +FLT +HPN+ G++C
Sbjct: 55 ESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNIC 114
Query: 94 ISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKE 153
+ IL E+W+ +VRTILLS+ SLL EPN SP N A+ + WK
Sbjct: 115 LDIL-------------KEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAEL---WKN 158
Query: 154 SKGKDREYTDIIRKQV 169
+ + KQV
Sbjct: 159 PTAFKKYLQETYSKQV 174
>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 89.4 bits (220), Expect = 3e-18
Identities = 49/136 (36%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 34 DEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVC 93
+ +L+ W I G T YE +K L+FP YPY+ P +FLT +HPN+ G++C
Sbjct: 16 ESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNIC 75
Query: 94 ISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKE 153
+ IL E+W+ +VRTILLS+ SLL EPN SP N A+ + WK
Sbjct: 76 LDIL-------------KEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAEL---WKN 119
Query: 154 SKGKDREYTDIIRKQV 169
+ + KQV
Sbjct: 120 PTAFKKYLQETYSKQV 135
>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 89.4 bits (220), Expect = 3e-18
Identities = 49/136 (36%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 34 DEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVC 93
+ +L+ W I G T YE +K L+FP YPY+ P +FLT +HPN+ G++C
Sbjct: 16 ESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNIC 75
Query: 94 ISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKE 153
+ IL E+W+ +VRTILLS+ SLL EPN SP N A+ + WK
Sbjct: 76 LDIL-------------KEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAEL---WKN 119
Query: 154 SKGKDREYTDIIRKQV 169
+ + KQV
Sbjct: 120 PTAFKKYLQETYSKQV 135
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 89.4 bits (220), Expect = 3e-18
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI G +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYTD 163
L +PN P + + +Y+ ++ + RE+T+
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRDKYNRLAREWTE 143
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 89.4 bits (220), Expect = 3e-18
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI G +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
L +PN P + + +Y+ ++ + RE+T
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRDKYNRISREWT 142
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 89.4 bits (220), Expect = 3e-18
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI G +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
L +PN P + + +Y+ ++ + RE+T
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRDKYNRISREWT 142
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 89.4 bits (220), Expect = 3e-18
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI G +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
L +PN P + + +Y+ ++ + RE+T
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRDKYNRISREWT 142
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 89.4 bits (220), Expect = 3e-18
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI G +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
L +PN P + + +Y+ ++ + RE+T
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRDKYNRISREWT 142
>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 89.4 bits (220), Expect = 3e-18
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI G +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
L +PN P + + +Y+ ++ + RE+T
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRDKYNRISREWT 142
>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 89.4 bits (220), Expect = 3e-18
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI G +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
L +PN P + + +Y+ ++ + RE+T
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRDKYNRISREWT 142
>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 89.4 bits (220), Expect = 3e-18
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY 70
K + EL L +P V + D+++W+ I GP ++ Y+GG F + FP DYP+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
Query: 71 SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 130
PP F T+++HPNI G +C+ IL +W+P + +LLS+ SL
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSL 109
Query: 131 LNEPNTFSPANVDASVMYRKWKESKGK-DREYT 162
L +PN P + + +Y+ ++ + RE+T
Sbjct: 110 LCDPNPDDPLVPEIARIYKTDRDKYNRISREWT 142
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 87.0 bits (214), Expect = 1e-17
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 14/126 (11%)
Query: 38 LYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISIL 97
+++W+ I GP ++ Y+GG F + FP DYP+ PP F T+++HPNI G +C+ IL
Sbjct: 1 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 60
Query: 98 HPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGK 157
+W+P + +LLS+ SLL +PN P + + +Y+ +E +
Sbjct: 61 R-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 107
Query: 158 -DREYT 162
RE+T
Sbjct: 108 IAREWT 113
>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
Length = 197
Score = 86.7 bits (213), Expect = 2e-17
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 16 ELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAF 75
EL L EP G D+ + + I G NT YE G FK + P YP+ PP
Sbjct: 10 ELHMLATEPPPGI-TCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQI 68
Query: 76 RFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPN 135
RFLT ++HPNI G +C+ +L P P W P+ N+ T+L S+ L++EPN
Sbjct: 69 RFLTPIYHPNIDSAGRICLDVLKLP---------PKGAWRPSLNIATVLTSIQLLMSEPN 119
Query: 136 TFSPANVDASVMY-----------RKWKESKGKDREYTD 163
P D S + R+W E + ++ D
Sbjct: 120 PDDPLMADISSEFKYNKPAFLKNARQWTEKHARQKQKAD 158
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,698,324
Number of Sequences: 37866
Number of extensions: 518755
Number of successful extensions: 1395
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1197
Number of HSP's gapped (non-prelim): 143
length of query: 236
length of database: 18,247,518
effective HSP length: 99
effective length of query: 137
effective length of database: 14,498,784
effective search space: 1986333408
effective search space used: 1986333408
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.