Guide to the Human Genome
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Name: ACVR1B Sequence: fasta or formatted (505aa) NCBI GI: 4757720
Description:

activin A receptor, type IB isoform a precursor

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [476aa] activin A receptor, type IB isoform b precursor
alt prot [487aa] activin A receptor, type IB isoform c precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         34           2
 C cysteine            3.4         17           2
 D aspartate           5.3         27           1
 E glutamate           5.9         30           2
 F phenylalanine       3.0         15           2
 G glycine             7.5         38           2
 H histidine           3.2         16           2
 I isoleucine          6.3         32           4
 K lysine              4.6         23           2
 L leucine            10.1         51           3
 M methionine          3.2         16           2
 N asparagine          3.6         18           1
 P proline             4.0         20           1
 Q glutamine           3.2         16           1
 R arginine            6.1         31           2
 S serine              6.3         32           2
 T threonine           4.4         22           1
 V valine              7.5         38           2
 W tryptophan          2.0         10           2
 Y tyrosine            3.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activin A receptor, type IB isoform a precursor [Homo... 
ACVR1B                0.923   activin A receptor, type IB isoform b precursor [Hom...
ACVR1B                0.830   activin A receptor, type IB isoform c precursor [Hom...
TGFBR1                0.657   transforming growth factor, beta receptor I isoform 1...
ACVR1C                0.611   activin A receptor, type IC isoform 1 
ACVR1C                0.579   activin A receptor, type IC isoform 2 
TGFBR1                0.546   transforming growth factor, beta receptor I isoform...
ACVR1C                0.500   activin A receptor, type IC isoform 3 
BMPR1B                0.439   bone morphogenetic protein receptor, type IB precurso...
BMPR1A                0.428   bone morphogenetic protein receptor, type IA precurs...
ACVR1                 0.414   activin A receptor, type I precursor 
ACVR1                 0.414   activin A receptor, type I precursor 
ACVRL1                0.386   activin A receptor type II-like 1 
ACVRL1                0.386   activin A receptor type II-like 1 
ACVR1C                0.361   activin A receptor, type IC isoform 4 
TGFBR2                0.199   transforming growth factor, beta receptor II isoform...
TGFBR2                0.199   transforming growth factor, beta receptor II isoform...
ACVR2A                0.196   activin A receptor, type IIA precursor 
ACVR2B                0.190   activin A receptor, type IIB precursor 
BMPR2                 0.167   bone morphogenetic protein receptor type II precurso...
AMHR2                 0.146   anti-Mullerian hormone receptor, type II 
CSK                   0.066   c-src tyrosine kinase 
CSK                   0.066   c-src tyrosine kinase 
ZAK                   0.060   MLK-related kinase isoform 2 
ZAK                   0.060   MLK-related kinase isoform 1 
RAF1                  0.056   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
MAP3K7                0.054   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.054   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.054   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.054   mitogen-activated protein kinase kinase kinase 7 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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