Guide to the Human Genome
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Name: ACVR1B Sequence: fasta or formatted (487aa) NCBI GI: 33598912
Description:

activin A receptor, type IB isoform c precursor

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [476aa] activin A receptor, type IB isoform b precursor
alt prot [505aa] activin A receptor, type IB isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         33           2
 C cysteine            3.7         18           2
 D aspartate           5.1         25           1
 E glutamate           5.5         27           2
 F phenylalanine       4.9         24           2
 G glycine             8.0         39           2
 H histidine           3.1         15           2
 I isoleucine          6.0         29           4
 K lysine              4.1         20           2
 L leucine            10.9         53           3
 M methionine          2.5         12           1
 N asparagine          3.1         15           1
 P proline             4.5         22           2
 Q glutamine           2.9         14           1
 R arginine            5.7         28           2
 S serine              6.4         31           2
 T threonine           4.3         21           1
 V valine              8.0         39           2
 W tryptophan          1.4          7           1
 Y tyrosine            3.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activin A receptor, type IB isoform c precursor [Hom... 
ACVR1B                0.864   activin A receptor, type IB isoform b precursor [Hom...
ACVR1B                0.864   activin A receptor, type IB isoform a precursor [Homo...
TGFBR1                0.530   transforming growth factor, beta receptor I isoform 1...
ACVR1C                0.486   activin A receptor, type IC isoform 1 
ACVR1C                0.454   activin A receptor, type IC isoform 2 
TGFBR1                0.414   transforming growth factor, beta receptor I isoform...
ACVR1C                0.372   activin A receptor, type IC isoform 3 
BMPR1B                0.341   bone morphogenetic protein receptor, type IB precurso...
BMPR1A                0.338   bone morphogenetic protein receptor, type IA precurs...
ACVR1                 0.331   activin A receptor, type I precursor 
ACVR1                 0.331   activin A receptor, type I precursor 
ACVRL1                0.313   activin A receptor type II-like 1 
ACVRL1                0.313   activin A receptor type II-like 1 
ACVR1C                0.227   activin A receptor, type IC isoform 4 
TGFBR2                0.161   transforming growth factor, beta receptor II isoform...
TGFBR2                0.161   transforming growth factor, beta receptor II isoform...
ACVR2A                0.155   activin A receptor, type IIA precursor 
ACVR2B                0.152   activin A receptor, type IIB precursor 
BMPR2                 0.135   bone morphogenetic protein receptor type II precurso...
AMHR2                 0.123   anti-Mullerian hormone receptor, type II 
RAF1                  0.058   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
ZAK                   0.058   MLK-related kinase isoform 2 
ZAK                   0.058   MLK-related kinase isoform 1 
CSK                   0.057   c-src tyrosine kinase 
CSK                   0.057   c-src tyrosine kinase 
MAP3K7                0.056   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.056   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.056   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.056   mitogen-activated protein kinase kinase kinase 7 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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