Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RPL36 Sequence: fasta or formatted (105aa) NCBI GI: 16117796
Description:

ribosomal protein L36

Referenced in:

Ribosomes

Other entries for this name:
alt mRNA [105aa] ribosomal protein L36
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         11           3
 C cysteine            1.0          1           1
 D aspartate           2.9          3           1
 E glutamate           4.8          5           2
 F phenylalanine       2.9          3           1
 G glycine             4.8          5           1
 H histidine           3.8          4           1
 I isoleucine          2.9          3           1
 K lysine             16.2         17           2
 L leucine             7.6          8           2
 M methionine          4.8          5           1
 N asparagine          2.9          3           1
 P proline             2.9          3           1
 Q glutamine           0.0          0           0
 R arginine           15.2         16           3
 S serine              3.8          4           1
 T threonine           3.8          4           1
 V valine              7.6          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L36 
RPL36                 1.000   ribosomal protein L36 
LOC100289079          0.723   PREDICTED: hypothetical protein XP_002344489 
KIAA1853              0.022   KIAA1853 protein 
NKAPL                 0.016   NFKB activating protein-like 
HHIPL2                0.011   HHIP-like 2 
SETX                  0.011   senataxin 
EBNA1BP2              0.011   EBNA1 binding protein 2 isoform 2 
EBNA1BP2              0.011   EBNA1 binding protein 2 isoform 1 
BRD3                  0.011   bromodomain containing protein 3 
DBC1                  0.011   deleted in bladder cancer 1 
MTIF2                 0.011   mitochondrial translational initiation factor 2 prec...
MTIF2                 0.011   mitochondrial translational initiation factor 2 prec...
SPTY2D1               0.011   SPT2, Suppressor of Ty, domain containing 1 
IGHMBP2               0.005   immunoglobulin mu binding protein 2 
TCHH                  0.005   trichohyalin 
ICA1L                 0.005   islet cell autoantigen 1,69kDa-like isoform 1 
NKAP                  0.005   NFKB activating protein 
PRDM15                0.005   PR domain containing 15 isoform 2 
PRDM15                0.005   PR domain containing 15 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press