Search of human proteins with 161016765

Search of human proteins with 161016765

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|161016765 tudor domain containing 12 [Homo sapiens]
         (395 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|161016765 tudor domain containing 12 [Homo sapiens]                816   0.0  
gi|169163653 PREDICTED: similar to tudor domain containing 1 [Ho...    47   3e-05
gi|169164192 PREDICTED: similar to tudor domain containing 1 [Ho...    47   3e-05
gi|169163210 PREDICTED: similar to tudor domain containing 1 [Ho...    47   3e-05
gi|145312259 tudor and KH domain containing isoform a [Homo sapi...    46   5e-05
gi|145312246 tudor and KH domain containing isoform b [Homo sapi...    46   5e-05
gi|145312270 tudor and KH domain containing isoform a [Homo sapi...    46   5e-05
gi|145312256 tudor and KH domain containing isoform a [Homo sapi...    46   5e-05
gi|58197558 tudor domain containing 6 [Homo sapiens]                   44   2e-04
gi|166851804 tudor domain containing 9 [Homo sapiens]                  40   0.004
gi|38505161 tudor domain containing 1 [Homo sapiens]                   37   0.031
gi|40255178 tudor domain containing 5 [Homo sapiens]                   36   0.053
gi|187936946 hypothetical protein LOC84140 [Homo sapiens]              32   1.00 
gi|4503299 basic helix-loop-helix family, member e40 [Homo sapiens]    30   2.9  
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]      30   3.8  
gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]         30   5.0  
gi|24586665 solute carrier family 39 (zinc transporter), member ...    29   6.5  
gi|205830407 solute carrier family 39 (zinc transporter), member...    29   6.5  
gi|205830405 solute carrier family 39 (zinc transporter), member...    29   6.5  
gi|205830403 solute carrier family 39 (zinc transporter), member...    29   6.5  
gi|13540521 basic helix-loop-helix domain containing, class B, 3...    29   8.5  

>gi|161016765 tudor domain containing 12 [Homo sapiens]
          Length = 395

 Score =  816 bits (2107), Expect = 0.0
 Identities = 395/395 (100%), Positives = 395/395 (100%)

Query: 1   MLQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFYNSTCQDIEIKPLTLEEG 60
           MLQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFYNSTCQDIEIKPLTLEEG
Sbjct: 1   MLQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFYNSTCQDIEIKPLTLEEG 60

Query: 61  QVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPY 120
           QVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPY
Sbjct: 61  QVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPY 120

Query: 121 RAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKATTQVEARLCAVEED 180
           RAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKATTQVEARLCAVEED
Sbjct: 121 RAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKATTQVEARLCAVEED 180

Query: 181 TFEVYLYVTIKDEKVCVNDDLVAKNYACYMSPTKNKNLDYLEKPRLNIKSAPSFNKLNPA 240
           TFEVYLYVTIKDEKVCVNDDLVAKNYACYMSPTKNKNLDYLEKPRLNIKSAPSFNKLNPA
Sbjct: 181 TFEVYLYVTIKDEKVCVNDDLVAKNYACYMSPTKNKNLDYLEKPRLNIKSAPSFNKLNPA 240

Query: 241 LTLWPMFLQGKDVQGMEDSHGVNFPAQSLQHTWCKGIVGDLRPTATAQDKAVKCNMDSLR 300
           LTLWPMFLQGKDVQGMEDSHGVNFPAQSLQHTWCKGIVGDLRPTATAQDKAVKCNMDSLR
Sbjct: 241 LTLWPMFLQGKDVQGMEDSHGVNFPAQSLQHTWCKGIVGDLRPTATAQDKAVKCNMDSLR 300

Query: 301 DSPKDKSEKKHHCISLKDTNKRVESSVYWPAKRGITIYADPDVPEASALSQKSNEKPLRL 360
           DSPKDKSEKKHHCISLKDTNKRVESSVYWPAKRGITIYADPDVPEASALSQKSNEKPLRL
Sbjct: 301 DSPKDKSEKKHHCISLKDTNKRVESSVYWPAKRGITIYADPDVPEASALSQKSNEKPLRL 360

Query: 361 TEKKEYDEKNSCVKLLQFLNPDPLRADGISDLQQT 395
           TEKKEYDEKNSCVKLLQFLNPDPLRADGISDLQQT
Sbjct: 361 TEKKEYDEKNSCVKLLQFLNPDPLRADGISDLQQT 395


>gi|169163653 PREDICTED: similar to tudor domain containing 1 [Homo
           sapiens]
          Length = 2080

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 33/230 (14%)

Query: 11  DPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFYNSTCQDIEIKPLTLEEGQVCVVYCEEL 70
           +P  FWV         DH  ++Q++   +N FY+  C++ E+     E G  C     + 
Sbjct: 639 NPSNFWVRTN------DHRNEFQEIMKNINKFYD-LCENDEMILRKPEPGLFCCARYSKD 691

Query: 71  KCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPYRAKKFSLYCT 130
           + + RA++  I      Y    + +D+     +   ++++++  F +LP  A   SL   
Sbjct: 692 RRFYRAVITEING----YKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLAHI 747

Query: 131 KPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKATTQVEARLCAVEEDTFEVYLYVTI 190
            PV                  W  AAI YF+ L+     +  ++ A ++D + V +    
Sbjct: 748 FPVE---------------DLWTKAAIDYFKKLV-LNKAILLQVIAKKDDKYTVNIQSVE 791

Query: 191 KDEKVCVNDDLVAKNYACYMSPTKNKNLDYLEK--PRLNIKSAPSFNKLN 238
             E + V   ++   YA Y        L+Y  K     ++ ++ S NK+N
Sbjct: 792 ASENIDVISLMLQAGYAEYF----QVELEYFPKSVSEYSMLNSESKNKVN 837


>gi|169164192 PREDICTED: similar to tudor domain containing 1 [Homo
           sapiens]
          Length = 2080

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 33/230 (14%)

Query: 11  DPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFYNSTCQDIEIKPLTLEEGQVCVVYCEEL 70
           +P  FWV         DH  ++Q++   +N FY+  C++ E+     E G  C     + 
Sbjct: 639 NPSNFWVRTN------DHRNEFQEIMKNINKFYD-LCENDEMILRKPEPGLFCCARYSKD 691

Query: 71  KCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPYRAKKFSLYCT 130
           + + RA++  I      Y    + +D+     +   ++++++  F +LP  A   SL   
Sbjct: 692 RRFYRAVITEING----YKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLAHI 747

Query: 131 KPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKATTQVEARLCAVEEDTFEVYLYVTI 190
            PV                  W  AAI YF+ L+     +  ++ A ++D + V +    
Sbjct: 748 FPVE---------------DLWTKAAIDYFKKLV-LNKAILLQVIAKKDDKYTVNIQSVE 791

Query: 191 KDEKVCVNDDLVAKNYACYMSPTKNKNLDYLEK--PRLNIKSAPSFNKLN 238
             E + V   ++   YA Y        L+Y  K     ++ ++ S NK+N
Sbjct: 792 ASENIDVISLMLQAGYAEYF----QVELEYFPKSVSEYSMLNSESKNKVN 837


>gi|169163210 PREDICTED: similar to tudor domain containing 1 [Homo
           sapiens]
          Length = 2080

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 33/230 (14%)

Query: 11  DPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFYNSTCQDIEIKPLTLEEGQVCVVYCEEL 70
           +P  FWV         DH  ++Q++   +N FY+  C++ E+     E G  C     + 
Sbjct: 639 NPSNFWVRTN------DHRNEFQEIMKNINKFYD-LCENDEMILRKPEPGLFCCARYSKD 691

Query: 71  KCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPYRAKKFSLYCT 130
           + + RA++  I      Y    + +D+     +   ++++++  F +LP  A   SL   
Sbjct: 692 RRFYRAVITEING----YKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLAHI 747

Query: 131 KPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKATTQVEARLCAVEEDTFEVYLYVTI 190
            PV                  W  AAI YF+ L+     +  ++ A ++D + V +    
Sbjct: 748 FPVE---------------DLWTKAAIDYFKKLV-LNKAILLQVIAKKDDKYTVNIQSVE 791

Query: 191 KDEKVCVNDDLVAKNYACYMSPTKNKNLDYLEK--PRLNIKSAPSFNKLN 238
             E + V   ++   YA Y        L+Y  K     ++ ++ S NK+N
Sbjct: 792 ASENIDVISLMLQAGYAEYF----QVELEYFPKSVSEYSMLNSESKNKVN 837


>gi|145312259 tudor and KH domain containing isoform a [Homo
           sapiens]
          Length = 561

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 35/213 (16%)

Query: 2   LQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFY-NSTCQDIEIKPLTLEEG 60
           L++ V   E P  FW+ I G        +   KL + M   Y NS  +D     LT+  G
Sbjct: 308 LEVYVSASEHPNHFWIQIVG-----SRSLQLDKLVNEMTQHYENSVPED-----LTVHVG 357

Query: 61  QVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPY 120
            +          W RA V     + +    + + VDF  N     K++R +   F+ LP+
Sbjct: 358 DIVAAPLPTNGSWYRARVLGTLENGN---LDLYFVDFGDNGDCPLKDLRALRSDFLSLPF 414

Query: 121 RAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKAT--TQVEARLCAVE 178
           +A + SL    P                  +W+  A+  F  L        + A++ +  
Sbjct: 415 QAIECSLARIAP---------------SGDQWEEEALDEFDRLTHCADWKPLVAKISSYV 459

Query: 179 EDTF----EVYLYVTIKDEKVCVNDDLVAKNYA 207
           +       ++YLY T   +K+ +  +LV K YA
Sbjct: 460 QTGISTWPKIYLYDTSNGKKLDIGLELVHKGYA 492


>gi|145312246 tudor and KH domain containing isoform b [Homo
           sapiens]
          Length = 516

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 35/213 (16%)

Query: 2   LQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFY-NSTCQDIEIKPLTLEEG 60
           L++ V   E P  FW+ I G        +   KL + M   Y NS  +D     LT+  G
Sbjct: 263 LEVYVSASEHPNHFWIQIVG-----SRSLQLDKLVNEMTQHYENSVPED-----LTVHVG 312

Query: 61  QVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPY 120
            +          W RA V     + +    + + VDF  N     K++R +   F+ LP+
Sbjct: 313 DIVAAPLPTNGSWYRARVLGTLENGN---LDLYFVDFGDNGDCPLKDLRALRSDFLSLPF 369

Query: 121 RAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKAT--TQVEARLCAVE 178
           +A + SL    P                  +W+  A+  F  L        + A++ +  
Sbjct: 370 QAIECSLARIAP---------------SGDQWEEEALDEFDRLTHCADWKPLVAKISSYV 414

Query: 179 EDTF----EVYLYVTIKDEKVCVNDDLVAKNYA 207
           +       ++YLY T   +K+ +  +LV K YA
Sbjct: 415 QTGISTWPKIYLYDTSNGKKLDIGLELVHKGYA 447


>gi|145312270 tudor and KH domain containing isoform a [Homo
           sapiens]
          Length = 561

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 35/213 (16%)

Query: 2   LQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFY-NSTCQDIEIKPLTLEEG 60
           L++ V   E P  FW+ I G        +   KL + M   Y NS  +D     LT+  G
Sbjct: 308 LEVYVSASEHPNHFWIQIVG-----SRSLQLDKLVNEMTQHYENSVPED-----LTVHVG 357

Query: 61  QVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPY 120
            +          W RA V     + +    + + VDF  N     K++R +   F+ LP+
Sbjct: 358 DIVAAPLPTNGSWYRARVLGTLENGN---LDLYFVDFGDNGDCPLKDLRALRSDFLSLPF 414

Query: 121 RAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKAT--TQVEARLCAVE 178
           +A + SL    P                  +W+  A+  F  L        + A++ +  
Sbjct: 415 QAIECSLARIAP---------------SGDQWEEEALDEFDRLTHCADWKPLVAKISSYV 459

Query: 179 EDTF----EVYLYVTIKDEKVCVNDDLVAKNYA 207
           +       ++YLY T   +K+ +  +LV K YA
Sbjct: 460 QTGISTWPKIYLYDTSNGKKLDIGLELVHKGYA 492


>gi|145312256 tudor and KH domain containing isoform a [Homo
           sapiens]
          Length = 561

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 35/213 (16%)

Query: 2   LQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFY-NSTCQDIEIKPLTLEEG 60
           L++ V   E P  FW+ I G        +   KL + M   Y NS  +D     LT+  G
Sbjct: 308 LEVYVSASEHPNHFWIQIVG-----SRSLQLDKLVNEMTQHYENSVPED-----LTVHVG 357

Query: 61  QVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPY 120
            +          W RA V     + +    + + VDF  N     K++R +   F+ LP+
Sbjct: 358 DIVAAPLPTNGSWYRARVLGTLENGN---LDLYFVDFGDNGDCPLKDLRALRSDFLSLPF 414

Query: 121 RAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKAT--TQVEARLCAVE 178
           +A + SL    P                  +W+  A+  F  L        + A++ +  
Sbjct: 415 QAIECSLARIAP---------------SGDQWEEEALDEFDRLTHCADWKPLVAKISSYV 459

Query: 179 EDTF----EVYLYVTIKDEKVCVNDDLVAKNYA 207
           +       ++YLY T   +K+ +  +LV K YA
Sbjct: 460 QTGISTWPKIYLYDTSNGKKLDIGLELVHKGYA 492


>gi|58197558 tudor domain containing 6 [Homo sapiens]
          Length = 2096

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 33/156 (21%)

Query: 9   IEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFYNSTCQ--DIEIKPLTLEEGQVCVVY 66
           +++P  FW+ ++       H+V + KL   M  FY+S  +   + +KP   E   +C V 
Sbjct: 496 VKNPSEFWIRLR------KHNVTFSKLMRRMCGFYSSASKLDGVVLKP---EPDDLCCVK 546

Query: 67  CEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPYRAKKFS 126
            +E         ++I +  D    + FLVD   +  V   ++R+++  F QLP  A K +
Sbjct: 547 WKE-----NGYYRAIVTKLDDKSVDVFLVDRGNSENVDWYDVRMLLPQFRQLPILAVKCT 601

Query: 127 LYCTKPVTLHIDFCRDSTDIVP-AKKWDNAAIQYFQ 161
           L                 DI P  K W   A+ +F+
Sbjct: 602 L----------------ADIWPLGKTWSQEAVSFFK 621



 Score = 32.7 bits (73), Expect = 0.59
 Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 42/213 (19%)

Query: 2   LQLLVLKIEDPGCFWVI----IKGCSPFLDHDVDYQKLNSAMNDFYNSTCQDIEIKPLTL 57
           +++ V  +E+PG FW      I+G    +  D+ Y   N+A     N+            
Sbjct: 774 VEVRVSYVENPGYFWCQLTRNIQGLKTLMS-DIQYYCKNTAAPHQRNTLA---------- 822

Query: 58  EEGQVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQ 117
                C+      + W RA++  I S     +     VD+     V  KNI  + E F++
Sbjct: 823 -----CLAKRTVNRQWSRALISGIQSVEHVNVT---FVDYGDREMVSVKNIYSISEEFLK 874

Query: 118 LPYRAKKFSLY-CTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNLLKATTQVEARLCA 176
           +  +A + SLY   +PV  +               WD  AIQ F   +    Q    L  
Sbjct: 875 VKAQAFRCSLYNLIQPVGQN------------PFVWDVKAIQAFNEFIDNAWQKNLELKC 922

Query: 177 VEEDTFEVYLYVTIKDEKVCVNDDLVAKNYACY 209
                  ++   +I +E   + D L     AC+
Sbjct: 923 T------IFALASINEELFNIVDLLTPFQSACH 949


>gi|166851804 tudor domain containing 9 [Homo sapiens]
          Length = 1382

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 11/119 (9%)

Query: 90   AECFLVDFAKNIPVKSKNIRVVVESFMQLPYRAKKFSLYCTKPVTLHIDFCRDSTDIVPA 149
            AE F VD+     V    +  +   F++LP++A +F +   +P          +  +V  
Sbjct: 976  AEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKMRP---------SAKSLVCG 1026

Query: 150  KKWDNAAIQYFQNLLKATTQVEARLCAVEEDT-FEVYLYVTIKDEKVCVNDDLVAKNYA 207
            K W + A Q+F +L+   T +      V      +VY Y  ++D  + + D L+ + YA
Sbjct: 1027 KHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQD-AINIRDVLIQQGYA 1084


>gi|38505161 tudor domain containing 1 [Homo sapiens]
          Length = 1189

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 46/186 (24%), Positives = 73/186 (39%), Gaps = 29/186 (15%)

Query: 2   LQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQKLNSAMNDFYNSTCQDIEIKPLTLEEGQ 61
           + ++V  I  PG F+  +      L  D   +KLN  +N      CQ         E GQ
Sbjct: 716 VDVVVCVIYSPGEFYCHV------LKEDA-LKKLND-LNKSLAEHCQQKLPNGFKAEIGQ 767

Query: 62  VCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFMQLPYR 121
            C  +      W RA+VK I  +      +   VD+     V +  +R++  +F+ LP++
Sbjct: 768 PCCAFFAGDGSWYRALVKEILPNGH---VKVHFVDYGNIEEVTADELRMISSTFLNLPFQ 824

Query: 122 AKKFSLYCTKPVTLHIDFCRDSTDIVPAKK-WDNAAIQYFQNLLKATTQVEARLCAVEED 180
             +  L                 DI    K W   AI  FQ +  A  +++AR+  V E+
Sbjct: 825 GIRCQL----------------ADIQSRNKHWSEEAITRFQ-MCVAGIKLQARVVEVTEN 867

Query: 181 TFEVYL 186
              V L
Sbjct: 868 GIGVEL 873


>gi|40255178 tudor domain containing 5 [Homo sapiens]
          Length = 981

 Score = 36.2 bits (82), Expect = 0.053
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 18/107 (16%)

Query: 57  LEEGQVCVVYCEELKCWCRAIVKSITSSADQYLAECFLVDFAKNIPVKSKNIRVVVESFM 116
           ++ G +C V   E K W R I+  +    +    E F  DF     V+  ++R +   + 
Sbjct: 526 IQPGHLCCVRISEDKWWYRVIIHRVLEKQE---VEVFYPDFGNIGIVQKSSLRFLKCCYT 582

Query: 117 QLPYRAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWDNAAIQYFQNL 163
           +LP +A   SL   +PV  H               W + AI  FQ L
Sbjct: 583 KLPAQAIPCSLAWVRPVEEH---------------WTSKAILQFQKL 614


>gi|187936946 hypothetical protein LOC84140 [Homo sapiens]
          Length = 660

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 20/75 (26%)

Query: 297 DSLRDSPKDKSEKK-HHCISLKDTNKRVESSVYWPAKRGITIYADPDVPEASALSQKSNE 355
           DSL DS +  SEK  +H +SL                  +T +++PD+ ++S+L   S+E
Sbjct: 134 DSLSDSSRSVSEKNSYHPVSL------------------MTSFSEPDLGQSSSLYVSSSE 175

Query: 356 KPLRLTEKKEYDEKN 370
           + L   E KEY  KN
Sbjct: 176 EELPNLE-KEYPRKN 189


>gi|4503299 basic helix-loop-helix family, member e40 [Homo sapiens]
          Length = 412

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/45 (33%), Positives = 26/45 (57%)

Query: 350 SQKSNEKPLRLTEKKEYDEKNSCVKLLQFLNPDPLRADGISDLQQ 394
           S+++ + P RL EKK  D  N C+  L+ L P+ L+   +  L++
Sbjct: 49  SKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEK 93


>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
          Length = 1390

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 319 TNKRVESSVYWPAKRGITIYADPDVPEA--SALSQKSNEK 356
           TNK ++S +  P       Y+D DVP    + LSQKS+ K
Sbjct: 731 TNKTLDSDISCPLLESDLAYSDDDVPSVYENGLSQKSSHK 770


>gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]
          Length = 2354

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 4/133 (3%)

Query: 252  DVQGMEDSHGVNFPAQSLQHTWCKGIVGDLRPTATAQDKAVKCNMDSLRDSPKDKSEKKH 311
            D+QG ED+      ++S     C   + D+   + A DK    +  + R  PK K     
Sbjct: 1880 DLQGKEDTAPTQAVSES-DDIVCG--ISDIDDLSVALDKPCHRHPPAERP-PKQKGRVAS 1935

Query: 312  HCISLKDTNKRVESSVYWPAKRGITIYADPDVPEASALSQKSNEKPLRLTEKKEYDEKNS 371
             C + K ++    S   +P  +   I  + D P++     + + K  +  +    +   S
Sbjct: 1936 QCQTAKISHSTQTSCKNYPVMKRKIIRQEEDPPKSKCSRLQDDRKTKKKVKIGTVEFPAS 1995

Query: 372  CVKLLQFLNPDPL 384
            C K+L+ + P  L
Sbjct: 1996 CTKVLKPMQPKAL 2008


>gi|24586665 solute carrier family 39 (zinc transporter), member 8
           isoform a [Homo sapiens]
          Length = 460

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 330 PAKRGITIYADPDVPEASALSQKSNEKPLRLTEKKEYDEKNSCVK 374
           PA  G+T YA+P V EA+      N   + L + K+     +C+K
Sbjct: 249 PAINGVTCYANPAVTEANGHIHFDNVSVVSLQDGKKEPSSCTCLK 293


>gi|205830407 solute carrier family 39 (zinc transporter), member 8
           isoform c [Homo sapiens]
          Length = 393

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 330 PAKRGITIYADPDVPEASALSQKSNEKPLRLTEKKEYDEKNSCVK 374
           PA  G+T YA+P V EA+      N   + L + K+     +C+K
Sbjct: 182 PAINGVTCYANPAVTEANGHIHFDNVSVVSLQDGKKEPSSCTCLK 226


>gi|205830405 solute carrier family 39 (zinc transporter), member 8
           isoform b [Homo sapiens]
          Length = 444

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 330 PAKRGITIYADPDVPEASALSQKSNEKPLRLTEKKEYDEKNSCVK 374
           PA  G+T YA+P V EA+      N   + L + K+     +C+K
Sbjct: 249 PAINGVTCYANPAVTEANGHIHFDNVSVVSLQDGKKEPSSCTCLK 293


>gi|205830403 solute carrier family 39 (zinc transporter), member 8
           isoform a [Homo sapiens]
          Length = 460

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 330 PAKRGITIYADPDVPEASALSQKSNEKPLRLTEKKEYDEKNSCVK 374
           PA  G+T YA+P V EA+      N   + L + K+     +C+K
Sbjct: 249 PAINGVTCYANPAVTEANGHIHFDNVSVVSLQDGKKEPSSCTCLK 293


>gi|13540521 basic helix-loop-helix domain containing, class B, 3
           [Homo sapiens]
          Length = 482

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 357 PLRLTEKKEYDEKNSCVKLLQFLNPDPLRADGISDLQQ 394
           P RL EKK  D  N C+  L+ L P+ L+   +  L++
Sbjct: 48  PHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEK 85


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,059,148
Number of Sequences: 37866
Number of extensions: 656841
Number of successful extensions: 1494
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1477
Number of HSP's gapped (non-prelim): 25
length of query: 395
length of database: 18,247,518
effective HSP length: 104
effective length of query: 291
effective length of database: 14,309,454
effective search space: 4164051114
effective search space used: 4164051114
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.