Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RNASE4 Sequence: fasta or formatted (147aa) NCBI GI: 37577172
Description:

ribonuclease, RNase A family, 4 precursor

Referenced in:

RNases and RNA Stability

Other entries for this name:
alt mRNA [147aa] ribonuclease, RNase A family, 4 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          5           1
 C cysteine            5.4          8           1
 D aspartate           4.1          6           1
 E glutamate           3.4          5           2
 F phenylalanine       2.7          4           1
 G glycine             7.5         11           2
 H histidine           4.8          7           1
 I isoleucine          4.8          7           1
 K lysine              3.4          5           1
 L leucine            10.2         15           7
 M methionine          4.1          6           2
 N asparagine          5.4          8           1
 P proline             3.4          5           1
 Q glutamine           5.4          8           1
 R arginine            9.5         14           2
 S serine              5.4          8           2
 T threonine           6.8         10           2
 V valine              6.1          9           2
 W tryptophan          0.7          1           1
 Y tyrosine            3.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribonuclease, RNase A family, 4 precursor 
RNASE4                1.000   ribonuclease, RNase A family, 4 precursor 
RNASE1                0.415   pancreatic ribonuclease precursor 
RNASE1                0.415   pancreatic ribonuclease precursor 
RNASE1                0.415   pancreatic ribonuclease precursor 
RNASE1                0.415   pancreatic ribonuclease precursor 
ANG                   0.258   angiogenin, ribonuclease, RNase A family, 5 precurs...
ANG                   0.258   angiogenin, ribonuclease, RNase A family, 5 precursor...
RNASE7                0.202   ribonuclease, RNase A family, 7 
RNASE6                0.192   ribonuclease, RNase A family, k6 
RNASE8                0.171   ribonuclease, RNase A family, 8 
RNASE3                0.111   ribonuclease, RNase A family, 3 (eosinophil cationic...
RNASE2                0.098   ribonuclease, RNase A family, 2 (liver, eosinophil-de...
RNASE10               0.066   ribonuclease, RNase A family, 10 (non-active) 
RNASE12               0.063   ribonuclease, RNase A family, 12 (non-active) 
RNASE9                0.035   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.035   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.035   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.035   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.035   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.035   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.035   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE11               0.028   ribonuclease, RNase A family, 11 (non-active) 
RNASE13               0.028   ribonuclease, RNase A family, 13 (non-active) 
DGKH                  0.007   diacylglycerol kinase, eta isoform 1 
DGKH                  0.007   diacylglycerol kinase, eta isoform 2 
DGKK                  0.007   diacylglycerol kinase kappa 
TM6SF2                0.007   transmembrane 6 superfamily member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press