Guide to the Human Genome
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Name: RNASE8 Sequence: fasta or formatted (154aa) NCBI GI: 21687143
Description:

ribonuclease, RNase A family, 8

Referenced in:

Ovary, Uterus and Placenta
RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         10           1
 C cysteine            6.5         10           2
 D aspartate           3.2          5           1
 E glutamate           3.2          5           1
 F phenylalanine       1.9          3           1
 G glycine             4.5          7           1
 H histidine           3.9          6           1
 I isoleucine          3.2          5           2
 K lysine              7.1         11           1
 L leucine             9.7         15           6
 M methionine          3.2          5           1
 N asparagine          5.2          8           1
 P proline             9.7         15           2
 Q glutamine           5.2          8           2
 R arginine            2.6          4           1
 S serine              7.1         11           2
 T threonine           5.8          9           1
 V valine              6.5         10           2
 W tryptophan          1.3          2           1
 Y tyrosine            3.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribonuclease, RNase A family, 8 
RNASE7                0.726   ribonuclease, RNase A family, 7 
RNASE6                0.476   ribonuclease, RNase A family, k6 
RNASE2                0.322   ribonuclease, RNase A family, 2 (liver, eosinophil-de...
RNASE3                0.257   ribonuclease, RNase A family, 3 (eosinophil cationic...
RNASE1                0.192   pancreatic ribonuclease precursor 
RNASE1                0.192   pancreatic ribonuclease precursor 
RNASE1                0.192   pancreatic ribonuclease precursor 
RNASE1                0.192   pancreatic ribonuclease precursor 
RNASE4                0.160   ribonuclease, RNase A family, 4 precursor 
RNASE4                0.160   ribonuclease, RNase A family, 4 precursor 
RNASE10               0.081   ribonuclease, RNase A family, 10 (non-active) 
ANG                   0.065   angiogenin, ribonuclease, RNase A family, 5 precurs...
ANG                   0.065   angiogenin, ribonuclease, RNase A family, 5 precursor...
RNASE12               0.062   ribonuclease, RNase A family, 12 (non-active) 
CD200R1               0.033   CD200 receptor 1 isoform a 
CD200R1               0.033   CD200 receptor 1 isoform b 
RNASE13               0.033   ribonuclease, RNase A family, 13 (non-active) 
RNASE9                0.016   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.016   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.016   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.016   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.016   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.016   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.016   ribonuclease, RNase A family, 9 (non-active) isofor...
MDN1                  0.016   MDN1, midasin homolog 
AMIGO1                0.010   AMIGO protein 
MCM2                  0.010   minichromosome maintenance complex component 2 [Homo...
CALR                  0.007   calreticulin precursor 
LRRC30                0.007   leucine rich repeat containing 30 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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