Guide to the Human Genome
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Name: RNASE6 Sequence: fasta or formatted (150aa) NCBI GI: 5032045
Description:

ribonuclease, RNase A family, k6

Referenced in:

RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0          9           3
 C cysteine            6.7         10           1
 D aspartate           4.0          6           1
 E glutamate           0.7          1           1
 F phenylalanine       4.0          6           2
 G glycine             2.0          3           1
 H histidine           6.0          9           1
 I isoleucine          4.0          6           1
 K lysine              6.0          9           1
 L leucine            12.0         18           6
 M methionine          2.0          3           1
 N asparagine          5.3          8           2
 P proline             8.7         13           2
 Q glutamine           6.7         10           1
 R arginine            4.0          6           2
 S serine              6.7         10           2
 T threonine           3.3          5           1
 V valine              6.7         10           1
 W tryptophan          2.0          3           1
 Y tyrosine            3.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribonuclease, RNase A family, k6 
RNASE8                0.482   ribonuclease, RNase A family, 8 
RNASE7                0.479   ribonuclease, RNase A family, 7 
RNASE2                0.310   ribonuclease, RNase A family, 2 (liver, eosinophil-de...
RNASE3                0.297   ribonuclease, RNase A family, 3 (eosinophil cationic...
RNASE1                0.201   pancreatic ribonuclease precursor 
RNASE1                0.201   pancreatic ribonuclease precursor 
RNASE1                0.201   pancreatic ribonuclease precursor 
RNASE1                0.201   pancreatic ribonuclease precursor 
RNASE4                0.182   ribonuclease, RNase A family, 4 precursor 
RNASE4                0.182   ribonuclease, RNase A family, 4 precursor 
RNASE10               0.102   ribonuclease, RNase A family, 10 (non-active) 
ANG                   0.086   angiogenin, ribonuclease, RNase A family, 5 precurs...
ANG                   0.086   angiogenin, ribonuclease, RNase A family, 5 precursor...
RNASE12               0.076   ribonuclease, RNase A family, 12 (non-active) 
RNASE9                0.046   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.046   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.046   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.046   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.046   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.046   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                0.046   ribonuclease, RNase A family, 9 (non-active) isofor...
ZNF860                0.023   zinc finger protein 860 
RNASE13               0.023   ribonuclease, RNase A family, 13 (non-active) 
ZNF799                0.017   zinc finger protein 799 
ZNF761                0.017   zinc finger protein 761 
ZNF845                0.017   zinc finger protein 845 
DNAH14                0.013   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
MUC6                  0.013   mucin 6, gastric 
ZNF611                0.013   zinc finger protein 611 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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